BLASTX nr result

ID: Dioscorea21_contig00015295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015295
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21155.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu...    89   5e-16
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...    87   1e-15
emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]    87   2e-15
gb|AFW70423.1| hypothetical protein ZEAMMB73_125095 [Zea mays]         86   3e-15

>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = +1

Query: 16   MSEEHRQKLRRLEVAVLEYQESLEEQGMLDKQEIDKKVENHRRRLQSEFGLLDSSDDQSS 195
            M+EEHRQKLRRLEVA++EY+ESLEE+G+   +EI++KV  HR+RLQSE+GL DS++D S 
Sbjct: 798  MNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRKRLQSEYGLSDSNEDVSW 857

Query: 196  NKHPTQRTRTGTDQENST 249
            NK  +   R   D    T
Sbjct: 858  NKRSSAERRDRRDDSRET 875


>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
            gi|223545356|gb|EEF46861.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 979

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/83 (54%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
 Frame = +1

Query: 7    DNSMSEEHRQKLRRLEVAVLEYQESLEEQGMLDKQEIDKKVENHRRRLQSEFGLLDSSDD 186
            D+ M+EE RQKLRRLEVA++EY+ESLEE+GM   +EI++KV +HR+RLQS++GLLDSS D
Sbjct: 813  DSGMNEEQRQKLRRLEVALIEYRESLEERGMKSAEEIERKVASHRKRLQSDYGLLDSSQD 872

Query: 187  QSSNK---HPTQRTRTGTDQENS 246
               N       +R R    +E+S
Sbjct: 873  TPGNSKRASSERRDRRDDSRESS 895


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
            [Glycine max]
          Length = 972

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/78 (55%), Positives = 60/78 (76%)
 Frame = +1

Query: 1    HNDNSMSEEHRQKLRRLEVAVLEYQESLEEQGMLDKQEIDKKVENHRRRLQSEFGLLDSS 180
            H D+ M+EE RQKLRRLEVA++EY+ESLEE+G+ + +EI+KKV++HR+RLQ E+GL DS 
Sbjct: 811  HADSGMNEEQRQKLRRLEVALIEYRESLEERGVKNLEEIEKKVQSHRKRLQVEYGLSDSG 870

Query: 181  DDQSSNKHPTQRTRTGTD 234
            +D   + H  +RT    D
Sbjct: 871  ED--GHGHSKRRTSERRD 886


>emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]
          Length = 1384

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/62 (66%), Positives = 54/62 (87%)
 Frame = +1

Query: 16   MSEEHRQKLRRLEVAVLEYQESLEEQGMLDKQEIDKKVENHRRRLQSEFGLLDSSDDQSS 195
            M+EEHRQKLRRLEVA++EY+ESLEE+G+   +EI++KV  HR+RLQSE+GL DS++D S 
Sbjct: 981  MNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRKRLQSEYGLSDSNEDVSW 1040

Query: 196  NK 201
            NK
Sbjct: 1041 NK 1042


>gb|AFW70423.1| hypothetical protein ZEAMMB73_125095 [Zea mays]
          Length = 949

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/80 (47%), Positives = 64/80 (80%)
 Frame = +1

Query: 1    HNDNSMSEEHRQKLRRLEVAVLEYQESLEEQGMLDKQEIDKKVENHRRRLQSEFGLLDSS 180
            H+D  + EEHRQKLR++E++V++Y+ESLEEQG+ D  EI++KV +HRRRLQSE+G L + 
Sbjct: 802  HHDTIVDEEHRQKLRQIEISVMQYRESLEEQGLRDLDEIERKVASHRRRLQSEYG-LSTP 860

Query: 181  DDQSSNKHPTQRTRTGTDQE 240
             D ++++  ++RT + ++++
Sbjct: 861  TDGANSRRSSERTSSSSERK 880


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