BLASTX nr result
ID: Dioscorea21_contig00015278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00015278
(2083 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g... 585 e-164
ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g... 575 e-161
ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g... 575 e-161
gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indi... 570 e-160
ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group] g... 570 e-160
>ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like [Brachypodium
distachyon]
Length = 538
Score = 585 bits (1508), Expect = e-164
Identities = 306/478 (64%), Positives = 368/478 (76%), Gaps = 5/478 (1%)
Frame = -2
Query: 2016 GQRNNYGKRYHSEADYPDSGGNKRRNYGDERDLSSSGQDDTVYRYLCSVKKIGSIIGRGG 1837
G RN++GKRY +DY ++GG KRRN GD D + DDTVYRYLC+ +KIGSIIGRGG
Sbjct: 5 GHRNSHGKRY---SDYAENGGGKRRNPGD--DTYAPCPDDTVYRYLCASRKIGSIIGRGG 59
Query: 1836 EIVKQLRSDTQAKIRIGDTVPGCDERVITIYSSSRKTNRFYDTGDDICPAQDALFKVHES 1657
EI KQLR+DTQAKIRIG++VPGCDERVITI+SSSR+TN DT D +CPAQDALF+VHE
Sbjct: 60 EIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTVEDTEDKVCPAQDALFRVHEK 119
Query: 1656 LLTVDSLNDEDADADAPQVMVRLLVPSDXXXXXXXXXXXXXXXIRSDTGAQIRILKSEHL 1477
L+T D DE+ + QV+VRLLVPSD IRSDTG+ IR+L +EHL
Sbjct: 120 LITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHL 179
Query: 1476 PPCALNNDELLQIYGEAPVVKKALFQVSSRLYDNPSRSQHLLIGNFPSSYAPIGSHGVPN 1297
P CA++ DELLQI G+ VV+KAL QVSSRL+DNPSRSQHLL + Y P+GS +
Sbjct: 180 PACAISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLLASSLTQPY-PVGSRHGSS 238
Query: 1296 TIAPVMSMGP---PFGGYKGD-AGDW-SFYPGLRDESSAKEFGFRLLCPSVNIGAVIGKS 1132
+ PV+ + P P+GGYKGD GDW S Y R+ESSAKEF RLLC + ++G VIGK
Sbjct: 239 STTPVVGIAPMVNPYGGYKGDMVGDWPSIYQPRREESSAKEFSLRLLCAASDVGGVIGKG 298
Query: 1131 GVIIKQIRQESGATIKVDSSSSEDDCVIAISAKEFFDEPISPTLDAALRLQPRCSEKIER 952
G IIKQIRQESGA IKVDSSS+EDDC+I +SAKEFF++PISPT+DA +RLQPRCSEK +
Sbjct: 299 GGIIKQIRQESGAFIKVDSSSAEDDCIITVSAKEFFEDPISPTIDATVRLQPRCSEKTDP 358
Query: 951 ESGEPSYTTRLLVPTSRIGCLIGKGGSIISDMRRATRANIRILSKENLPKVASEDDEMVQ 772
ESGEPSYTTRLLV TSRIGCLIGKGGSII+++RR +RANIRILSKEN+PKVASED+EMVQ
Sbjct: 359 ESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQ 418
Query: 771 ISGDLELVKSALVQIIKRLKAHFFEKDAALSSFPSFAPYHSISSDISDVSKYGGWDGK 598
ISGDL++ K ALVQI RLKA+FFE++ +LS F PYH + + ++D SKY G D K
Sbjct: 419 ISGDLDVAKHALVQITTRLKANFFEREGSLSGFQPVIPYHPLPASVADESKYLGRDAK 476
>ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like [Brachypodium
distachyon]
Length = 542
Score = 575 bits (1481), Expect = e-161
Identities = 301/478 (62%), Positives = 365/478 (76%), Gaps = 5/478 (1%)
Frame = -2
Query: 2016 GQRNNYGKRYHSEADYPDSGGNKRRNYGDERDLSSSGQDDTVYRYLCSVKKIGSIIGRGG 1837
G RN++GKR+ +DY ++GG KRRN GD D + G DDTVYRYLC+ +KIGSIIGRGG
Sbjct: 5 GHRNSHGKRH---SDYSENGGGKRRNPGD--DTYAPGPDDTVYRYLCTSRKIGSIIGRGG 59
Query: 1836 EIVKQLRSDTQAKIRIGDTVPGCDERVITIYSSSRKTNRFYDTGDDICPAQDALFKVHES 1657
EI KQLR+DTQAKIRIG++VPGCDERVITI+SSSR+TN DT D +CPAQDALF+VHE
Sbjct: 60 EIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEK 119
Query: 1656 LLTVDSLNDEDADADAPQVMVRLLVPSDXXXXXXXXXXXXXXXIRSDTGAQIRILKSEHL 1477
L+ D DE+ + QV VRLLVPSD IRSDTG+QIR+L +E L
Sbjct: 120 LIADDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERL 179
Query: 1476 PPCALNNDELLQIYGEAPVVKKALFQVSSRLYDNPSRSQHLLIGNFPSSYAPIGSHGVPN 1297
P C ++ DELLQI G+ VV+KAL QVSSRL+DNPSRSQHL + Y P+GS +
Sbjct: 180 PACGISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLQAPSLMQPY-PVGSRNGSS 238
Query: 1296 TIAPVMSMGP---PFGGYKGD-AGDW-SFYPGLRDESSAKEFGFRLLCPSVNIGAVIGKS 1132
+ APV+ + P P+GGYKGD GDW S Y R++SSAK+F RLLC + ++G VIGK
Sbjct: 239 STAPVVGIAPMVSPYGGYKGDMVGDWPSIYQPRREDSSAKDFSLRLLCAASDVGGVIGKG 298
Query: 1131 GVIIKQIRQESGATIKVDSSSSEDDCVIAISAKEFFDEPISPTLDAALRLQPRCSEKIER 952
G IIKQIRQESGA IKVDSSS+EDDC+I +SAKEFF++P+SPT+DA +RLQP+CSEK +
Sbjct: 299 GGIIKQIRQESGAFIKVDSSSAEDDCIITVSAKEFFEDPVSPTIDATVRLQPKCSEKTDP 358
Query: 951 ESGEPSYTTRLLVPTSRIGCLIGKGGSIISDMRRATRANIRILSKENLPKVASEDDEMVQ 772
ESGEPSYTTRLLV TS+IGCLIGKGGSII+++RR +RANIRILSKEN+PKVASED+EMVQ
Sbjct: 359 ESGEPSYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQ 418
Query: 771 ISGDLELVKSALVQIIKRLKAHFFEKDAALSSFPSFAPYHSISSDISDVSKYGGWDGK 598
ISGDLE+ + ALVQI RLKA+FFE++ ALS F PYH + + ISD KY G D K
Sbjct: 419 ISGDLEVARHALVQITTRLKANFFEREGALSGFQPVIPYHPMPASISDEPKYLGRDTK 476
>ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product
[Vitis vinifera]
Length = 548
Score = 575 bits (1481), Expect = e-161
Identities = 296/482 (61%), Positives = 379/482 (78%), Gaps = 7/482 (1%)
Frame = -2
Query: 2022 MSGQRNNYGKRYHSEADYPDSGGNKRRNYGDERDLSSSGQDDTVYRYLCSVKKIGSIIGR 1843
M+GQRN+YGKR HS++DY D+GGNKRRN GD+RD + +DTVYRYLC +KIGSIIGR
Sbjct: 1 MAGQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGR 60
Query: 1842 GGEIVKQLRSDTQAKIRIGDTVPGCDERVITIYSSSRKTNRFYDTGDDICPAQDALFKVH 1663
GGEIVKQLR DT++KIRIG+TVPGC+ERV+TIYSSS +TN F D+ + PAQDALF+VH
Sbjct: 61 GGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALFRVH 120
Query: 1662 ESLLTVDSLNDEDADADAPQVMVRLLVPSDXXXXXXXXXXXXXXXIRSDTGAQIRILKSE 1483
+ +++ + ++ ED++ +A QV VRLLVPSD IRS++GAQ+RILK +
Sbjct: 121 DRVVS-EEVHGEDSE-EASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDD 178
Query: 1482 HLPPCALNNDELLQIYGEAPVVKKALFQVSSRLYDNPSRSQHLLIGNFPSSYAPIGSHGV 1303
HLP CAL++DEL+QI GE +V+KAL+Q++SRL+DNPSRSQHLL P+ Y+ GS
Sbjct: 179 HLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMG 238
Query: 1302 PNTIAPVMSMGP---PFGGYKGDAGDWS--FYPGLRDESSAKEFGFRLLCPSVNIGAVIG 1138
P + AP+M + P +GGY+GD+GDWS Y RDE+S+KEF RL+CP NIG VIG
Sbjct: 239 PTSGAPIMGLAPLVGTYGGYRGDSGDWSRSLYSAPRDEASSKEFSLRLVCPIGNIGGVIG 298
Query: 1137 KSGVIIKQIRQESGATIKVDSSSSE--DDCVIAISAKEFFDEPISPTLDAALRLQPRCSE 964
K GVII QIRQESGA IKVDS+S+ DDC+IAISAKEFF++ SPT++AA+RLQPRCSE
Sbjct: 299 KGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSE 358
Query: 963 KIERESGEPSYTTRLLVPTSRIGCLIGKGGSIISDMRRATRANIRILSKENLPKVASEDD 784
K+ER+SG S+TTRLLVPTSRIGCLIGKGG+II++MR+ T+ANIRILSKENLPKVASEDD
Sbjct: 359 KVERDSGIVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDD 418
Query: 783 EMVQISGDLELVKSALVQIIKRLKAHFFEKDAALSSFPSFAPYHSISSDISDVSKYGGWD 604
EMVQI+GDL++ K AL+Q+ RL+A+ F+++ A+S+F PY +++D SD KY G D
Sbjct: 419 EMVQIAGDLDVAKDALIQVTTRLRANLFDREGAVSAFVPVLPYLPMAADGSDGLKYDGRD 478
Query: 603 GK 598
K
Sbjct: 479 NK 480
>gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 570 bits (1470), Expect = e-160
Identities = 299/478 (62%), Positives = 366/478 (76%), Gaps = 5/478 (1%)
Frame = -2
Query: 2016 GQRNNYGKRYHSEADYPDSGGNKRRNYGDERDLSSSGQDDTVYRYLCSVKKIGSIIGRGG 1837
G RN++GKR+ +DY ++GG KRRN GD D + G DDTVYRYLC +KIGSIIGRGG
Sbjct: 5 GHRNSHGKRH---SDYAENGGGKRRNPGD--DTYAPGPDDTVYRYLCPSRKIGSIIGRGG 59
Query: 1836 EIVKQLRSDTQAKIRIGDTVPGCDERVITIYSSSRKTNRFYDTGDDICPAQDALFKVHES 1657
EI KQ+R+DTQAKIRIG++V GCDERVITI+SSSR+TN D D +CPAQDALF+VHE
Sbjct: 60 EIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEK 119
Query: 1656 LLTVDSLNDEDADADAPQVMVRLLVPSDXXXXXXXXXXXXXXXIRSDTGAQIRILKSEHL 1477
L D + +E++D QV VRLLVPSD IRSDTGA IR+L +E+L
Sbjct: 120 LSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENL 179
Query: 1476 PPCALNNDELLQIYGEAPVVKKALFQVSSRLYDNPSRSQHLLIGNFPSSYAPIGSHGVPN 1297
P CA++ DELLQI G++ VV+KAL QVSSRL+DNPSRSQHLL + Y P+GSH +
Sbjct: 180 PACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPY-PVGSHLGSS 238
Query: 1296 TIAPVMSMGP---PFGGYKGD-AGDW-SFYPGLRDESSAKEFGFRLLCPSVNIGAVIGKS 1132
+ APV+ + P +GGYKGD AGDW S Y R+ESSAKEF RLLC + N+G VIGK
Sbjct: 239 STAPVVGITPLISSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVIGKG 298
Query: 1131 GVIIKQIRQESGATIKVDSSSSEDDCVIAISAKEFFDEPISPTLDAALRLQPRCSEKIER 952
G IIKQIRQESGA IKVDSS++EDDC+I +SAKEFF++P+SPT++AA+ LQPRCSEK +
Sbjct: 299 GGIIKQIRQESGAFIKVDSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDP 358
Query: 951 ESGEPSYTTRLLVPTSRIGCLIGKGGSIISDMRRATRANIRILSKENLPKVASEDDEMVQ 772
ES PSYTTRLLV TSRIGCLIGKGGSII+++RR +RANIRILSKEN+PKVA+ED+EMVQ
Sbjct: 359 ESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQ 418
Query: 771 ISGDLELVKSALVQIIKRLKAHFFEKDAALSSFPSFAPYHSISSDISDVSKYGGWDGK 598
ISGDL++V+ AL+QI RLKA+FFE++ ALS FP PYH + +S+ KY G D K
Sbjct: 419 ISGDLDVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRDTK 476
>ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic
acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein,
putative, expressed [Oryza sativa Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein,
putative, expressed [Oryza sativa Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa
Japonica Group] gi|125586438|gb|EAZ27102.1| hypothetical
protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 542
Score = 570 bits (1470), Expect = e-160
Identities = 299/478 (62%), Positives = 366/478 (76%), Gaps = 5/478 (1%)
Frame = -2
Query: 2016 GQRNNYGKRYHSEADYPDSGGNKRRNYGDERDLSSSGQDDTVYRYLCSVKKIGSIIGRGG 1837
G RN++GKR+ +DY ++GG KRRN GD D + G DDTVYRYLC +KIGSIIGRGG
Sbjct: 5 GHRNSHGKRH---SDYAENGGGKRRNPGD--DTYAPGPDDTVYRYLCPSRKIGSIIGRGG 59
Query: 1836 EIVKQLRSDTQAKIRIGDTVPGCDERVITIYSSSRKTNRFYDTGDDICPAQDALFKVHES 1657
EI KQ+R+DTQAKIRIG++V GCDERVITI+SSSR+TN D D +CPAQDALF+VHE
Sbjct: 60 EIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEK 119
Query: 1656 LLTVDSLNDEDADADAPQVMVRLLVPSDXXXXXXXXXXXXXXXIRSDTGAQIRILKSEHL 1477
L D + +E++D QV VRLLVPSD IRSDTGA IR+L +E+L
Sbjct: 120 LSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENL 179
Query: 1476 PPCALNNDELLQIYGEAPVVKKALFQVSSRLYDNPSRSQHLLIGNFPSSYAPIGSHGVPN 1297
P CA++ DELLQI G++ VV+KAL QVSSRL+DNPSRSQHLL + Y P+GSH +
Sbjct: 180 PACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPY-PVGSHLGSS 238
Query: 1296 TIAPVMSMGP---PFGGYKGD-AGDW-SFYPGLRDESSAKEFGFRLLCPSVNIGAVIGKS 1132
+ APV+ + P +GGYKGD AGDW S Y R+ESSAKEF RLLC + N+G VIGK
Sbjct: 239 STAPVVGITPLISSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVIGKG 298
Query: 1131 GVIIKQIRQESGATIKVDSSSSEDDCVIAISAKEFFDEPISPTLDAALRLQPRCSEKIER 952
G IIKQIRQESGA IKVDSS++EDDC+I +SAKEFF++P+SPT++AA+ LQPRCSEK +
Sbjct: 299 GGIIKQIRQESGAFIKVDSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDP 358
Query: 951 ESGEPSYTTRLLVPTSRIGCLIGKGGSIISDMRRATRANIRILSKENLPKVASEDDEMVQ 772
ES PSYTTRLLV TSRIGCLIGKGGSII+++RR +RANIRILSKEN+PKVA+ED+EMVQ
Sbjct: 359 ESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQ 418
Query: 771 ISGDLELVKSALVQIIKRLKAHFFEKDAALSSFPSFAPYHSISSDISDVSKYGGWDGK 598
ISGDL++V+ AL+QI RLKA+FFE++ ALS FP PYH + +S+ KY G D K
Sbjct: 419 ISGDLDVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRDTK 476