BLASTX nr result

ID: Dioscorea21_contig00015255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015255
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61321.1| hypothetical protein OsJ_15428 [Oryza sativa Japo...    56   7e-06
gb|EEC77620.1| hypothetical protein OsI_16604 [Oryza sativa Indi...    56   7e-06
ref|NP_001053286.1| Os04g0510400 [Oryza sativa Japonica Group] g...    56   7e-06

>gb|EEE61321.1| hypothetical protein OsJ_15428 [Oryza sativa Japonica Group]
          Length = 776

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +2

Query: 530 VLDAPMDNDAEEDTKDDLLLAEDEFYAWKELRLHPLLMKSIRHL 661
           V D    ND E+D  D L+L EDE YAW+ELRLHPLL+ ++R L
Sbjct: 117 VEDMQDGNDMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRL 160


>gb|EEC77620.1| hypothetical protein OsI_16604 [Oryza sativa Indica Group]
          Length = 776

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +2

Query: 530 VLDAPMDNDAEEDTKDDLLLAEDEFYAWKELRLHPLLMKSIRHL 661
           V D    ND E+D  D L+L EDE YAW+ELRLHPLL+ ++R L
Sbjct: 117 VEDMQDGNDMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRL 160


>ref|NP_001053286.1| Os04g0510400 [Oryza sativa Japonica Group]
           gi|158513183|sp|A2XVF7.2|RH13_ORYSI RecName:
           Full=DEAD-box ATP-dependent RNA helicase 13
           gi|158513708|sp|A3AVH5.2|RH13_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 13
           gi|32488303|emb|CAE03369.1| OSJNBb0065L13.12 [Oryza
           sativa Japonica Group] gi|113564857|dbj|BAF15200.1|
           Os04g0510400 [Oryza sativa Japonica Group]
           gi|116311068|emb|CAH67998.1| OSIGBa0157K09-H0214G12.9
           [Oryza sativa Indica Group]
          Length = 832

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +2

Query: 530 VLDAPMDNDAEEDTKDDLLLAEDEFYAWKELRLHPLLMKSIRHL 661
           V D    ND E+D  D L+L EDE YAW+ELRLHPLL+ ++R L
Sbjct: 173 VEDMQDGNDMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRL 216


Top