BLASTX nr result

ID: Dioscorea21_contig00015242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015242
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892142.1| hypothetical protein ARALYDRAFT_470277 [Arab...    93   3e-17
ref|NP_171799.2| peroxin 6 [Arabidopsis thaliana] gi|75330784|sp...    92   3e-17
gb|AAD25809.1|AC006550_17 Belongs to PF|00004 ATPases associated...    92   3e-17
ref|XP_002269370.2| PREDICTED: peroxisome biogenesis protein 6-l...    92   6e-17
emb|CBI32241.3| unnamed protein product [Vitis vinifera]               92   6e-17

>ref|XP_002892142.1| hypothetical protein ARALYDRAFT_470277 [Arabidopsis lyrata subsp.
           lyrata] gi|297337984|gb|EFH68401.1| hypothetical protein
           ARALYDRAFT_470277 [Arabidopsis lyrata subsp. lyrata]
          Length = 947

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/95 (51%), Positives = 65/95 (68%)
 Frame = +3

Query: 3   SLMDQVSIASEFASTVREFTRPSSEAGFLSLDKESNSTPNISEVEKLIQHRVLLIATASS 182
           SL D+V ++SE AS +RE T P S     S++++ NS  +  EV K   H+VLLIA+A S
Sbjct: 463 SLGDRVGVSSEIASVIRELTEPVSNGENSSMEEKPNSNFSEDEVGKFRGHQVLLIASAES 522

Query: 183 PEGLQPPIMRCFTHEISMPSLNETQRATMLSQSLQ 287
            EG+ P I RCF+HEI M SLN+ QR+ ML+QSLQ
Sbjct: 523 TEGISPTIRRCFSHEIRMGSLNDEQRSEMLTQSLQ 557


>ref|NP_171799.2| peroxin 6 [Arabidopsis thaliana] gi|75330784|sp|Q8RY16.1|PEX6_ARATH
           RecName: Full=Peroxisome biogenesis protein 6; AltName:
           Full=Peroxin-6; Short=AtPEX6 gi|19310449|gb|AAL84960.1|
           At1g03000/F22D16.27 [Arabidopsis thaliana]
           gi|24797060|gb|AAN64542.1| At1g03000/F22D16.27
           [Arabidopsis thaliana] gi|37223130|gb|AAQ90161.1| AAA
           family ATPase peroxin 6 [Arabidopsis thaliana]
           gi|332189392|gb|AEE27513.1| peroxin 6 [Arabidopsis
           thaliana]
          Length = 941

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/95 (53%), Positives = 67/95 (70%)
 Frame = +3

Query: 3   SLMDQVSIASEFASTVREFTRPSSEAGFLSLDKESNSTPNISEVEKLIQHRVLLIATASS 182
           SL D+V ++ E AS +RE T P S  G  S++++SNS  + +EV K   H+VLLIA+A S
Sbjct: 457 SLGDRVGVSFEIASVIRELTEPVSN-GDSSMEEKSNSNFSENEVGKFRGHQVLLIASAES 515

Query: 183 PEGLQPPIMRCFTHEISMPSLNETQRATMLSQSLQ 287
            EG+ P I RCF+HEI M SLN+ QR+ MLSQSLQ
Sbjct: 516 TEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQ 550


>gb|AAD25809.1|AC006550_17 Belongs to PF|00004 ATPases associated with various cellular
           activities [Arabidopsis thaliana]
          Length = 983

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/95 (53%), Positives = 67/95 (70%)
 Frame = +3

Query: 3   SLMDQVSIASEFASTVREFTRPSSEAGFLSLDKESNSTPNISEVEKLIQHRVLLIATASS 182
           SL D+V ++ E AS +RE T P S  G  S++++SNS  + +EV K   H+VLLIA+A S
Sbjct: 489 SLGDRVGVSFEIASVIRELTEPVSN-GDSSMEEKSNSNFSENEVGKFRGHQVLLIASAES 547

Query: 183 PEGLQPPIMRCFTHEISMPSLNETQRATMLSQSLQ 287
            EG+ P I RCF+HEI M SLN+ QR+ MLSQSLQ
Sbjct: 548 TEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQ 582


>ref|XP_002269370.2| PREDICTED: peroxisome biogenesis protein 6-like [Vitis vinifera]
          Length = 935

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/92 (53%), Positives = 61/92 (66%)
 Frame = +3

Query: 12  DQVSIASEFASTVREFTRPSSEAGFLSLDKESNSTPNISEVEKLIQHRVLLIATASSPEG 191
           DQV IASE AS +R+FT P  E   +  +K+  S   + + EK+ +H+VLL+A A S EG
Sbjct: 457 DQVGIASEVASVIRKFTEPVIEDEDIYSEKKLTSDFQLKDAEKIKRHQVLLVAAADSSEG 516

Query: 192 LQPPIMRCFTHEISMPSLNETQRATMLSQSLQ 287
           L P I RCF+HEI M  L E QRA MLSQSLQ
Sbjct: 517 LPPTIRRCFSHEIRMGPLTEEQRAKMLSQSLQ 548


>emb|CBI32241.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/92 (53%), Positives = 61/92 (66%)
 Frame = +3

Query: 12  DQVSIASEFASTVREFTRPSSEAGFLSLDKESNSTPNISEVEKLIQHRVLLIATASSPEG 191
           DQV IASE AS +R+FT P  E   +  +K+  S   + + EK+ +H+VLL+A A S EG
Sbjct: 457 DQVGIASEVASVIRKFTEPVIEDEDIYSEKKLTSDFQLKDAEKIKRHQVLLVAAADSSEG 516

Query: 192 LQPPIMRCFTHEISMPSLNETQRATMLSQSLQ 287
           L P I RCF+HEI M  L E QRA MLSQSLQ
Sbjct: 517 LPPTIRRCFSHEIRMGPLTEEQRAKMLSQSLQ 548


Top