BLASTX nr result

ID: Dioscorea21_contig00015228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015228
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283414.1| PREDICTED: probable disease resistance prote...    88   5e-20
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    80   1e-19
emb|CBI29677.3| unnamed protein product [Vitis vinifera]               78   4e-19
ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Popul...    78   6e-18
ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichoca...    71   2e-17

>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1016

 Score = 88.2 bits (217), Expect(2) = 5e-20
 Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
 Frame = +3

Query: 126  KVILPVCASTMNIKTCNF-IQLSDIFHW----DDLRQLIYCKFEGCKEMKWLGNDGDIVF 290
            +++LP     + I TCN    L D+        DL+  +  K EG K + W+ +  D   
Sbjct: 749  QLVLPTNVQFLQIYTCNDPTSLLDVSPSLKIATDLKACLISKCEGIKYLWWVEDCID--- 805

Query: 291  PSLKTLRLRHLPSFEGLCKEK-THEETLKNLRKLYIYDCHKLKYLIPNDLLVNNLQNLEQ 467
             SL +L L  LP+   L K K T      +L+ LY+  CH LK+L+  +L+ N+LQNL+ 
Sbjct: 806  -SLNSLFLDLLPNLRVLFKLKPTDNVRCSSLKHLYVSKCHNLKHLLTLELVKNHLQNLQN 864

Query: 468  IFIGRCDEMEDIISG-------KGSATMASLPKLKTLKLFDLPSLTSIYHGKLVCDSL 620
            I++  C +MEDII G       + +  +   P  + L+L DLP L  I+ G + CDSL
Sbjct: 865  IYVRSCSQMEDIIVGVEEEDINEKNNPILCFPNFRCLELVDLPKLKGIWKGTMTCDSL 922



 Score = 37.0 bits (84), Expect(2) = 5e-20
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
 Frame = +1

Query: 709  CDSLYLMKIDNCPNLKELPFLI-------NKER----PLSMRIVAREKWWERLEWE-DAQ 852
            CDSL  + +  C NLK LPF +       N +R    P   +I   ++WW+ +EW+    
Sbjct: 919  CDSLQHLLVLKCRNLKRLPFAVSVHINDGNGQRRASTPPLKQIGGDKEWWDGVEWDTHPH 978

Query: 853  LKELLQP 873
             K + QP
Sbjct: 979  AKSVFQP 985


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1075

 Score = 80.1 bits (196), Expect(2) = 1e-19
 Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 25/187 (13%)
 Frame = +3

Query: 135  LPVCASTMNIKTCN----FIQLSDIFHWDDLRQLIYCKFEGCKEMKWLGNDGDIVFPSLK 302
            LP   S+ +I  C+       +S   H   L+ L   + +G + +  +      +F SL+
Sbjct: 826  LPEDVSSFSIGRCHDARSLCDVSPFKHATSLKSLGMWECDGIECLASMSESSTDIFESLE 885

Query: 303  TLRLRHLPSF------EGLCKEKTHEE-TLKNLRKLYIYDCHKLKYLIPNDLLVNNLQNL 461
            +L L+ L +F      EG          T  +L+K+ I +C  +K L   DLL N L NL
Sbjct: 886  SLYLKTLKNFCVFITREGAAPPSWQSNGTFSHLKKVTIGECPSMKNLFSLDLLPN-LTNL 944

Query: 462  EQIFIGRCDEMEDII--------------SGKGSATMASLPKLKTLKLFDLPSLTSIYHG 599
            E I +  CD+ME+II              S      + SLP LK LKL +LP L SI+HG
Sbjct: 945  EVIEVDDCDQMEEIIAIEDEEEGMMVEDSSSSSHYAVTSLPNLKVLKLSNLPELKSIFHG 1004

Query: 600  KLVCDSL 620
            +++CDSL
Sbjct: 1005 EVICDSL 1011



 Score = 43.5 bits (101), Expect(2) = 1e-19
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = +1

Query: 709  CDSLYLMKIDNCPNLKELPFL----INKERPLSMRIVAREKWWERLEWEDAQLKELLQP 873
            CDSL  + + NCPNLK +        N + PL       ++WWE +EW ++  K  L+P
Sbjct: 1008 CDSLQEIIVVNCPNLKRISLSHRNHANGQTPLRKIQAYPKEWWESVEWGNSNSKNALEP 1066


>emb|CBI29677.3| unnamed protein product [Vitis vinifera]
          Length = 979

 Score = 78.2 bits (191), Expect(2) = 4e-19
 Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
 Frame = +3

Query: 114  ESMEKVILPVCASTMNIKTCNFIQLSDI--FHWDDLRQLIYCKFEGCKEMKWLGNDGDI- 284
            E M  VIL V A T   +  N   +S +  F  +++  L  C  EGC E++ + N   I 
Sbjct: 748  EGMNPVILKVLAKTHAFRLINHKGVSRLSDFGIENMNDLFICSIEGCNEIETIINGTGIT 807

Query: 285  --VFPSLKTLRLRHLPSFEGLCKEKTHEETLKNLRKLYIYDCHKLKYLIPNDLLVNNLQN 458
              V   L+ L++ ++   E + +   H  +L  LR L +  C +LK +  N + +  L  
Sbjct: 808  KGVLEYLRHLQVNNVLELESIWQGPVHAGSLTRLRTLTLVKCPQLKRIFSNGM-IQQLSK 866

Query: 459  LEQIFIGRCDEMEDIISGKGSATMAS--LPKLKTLKLFDLPSLTSIYHG 599
            LE + +  CD++E+II    +  + S  LP+LKTL L +L +LTSI+ G
Sbjct: 867  LEDLRVEECDQIEEIIMESENNGLESNQLPRLKTLTLLNLKTLTSIWGG 915



 Score = 43.9 bits (102), Expect(2) = 4e-19
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
 Frame = +1

Query: 715  SLYLMKIDNCPNLKELPFLINKERPLSMR-IVAREKWWERLEW-EDAQLKELLQ 870
            SL +++I  CP LK LPF  N +    +R I  + +WWE LEW +DA +++ L+
Sbjct: 922  SLQVIEISKCPKLKRLPF--NNDNATKLRSIKGQREWWEALEWKDDAAIEQRLE 973


>ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222869827|gb|EEF06958.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 954

 Score = 78.2 bits (191), Expect(2) = 6e-18
 Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 25/187 (13%)
 Frame = +3

Query: 135  LPVCASTMNIKTCN----FIQLSDIFHWDDLRQLIYCKFEGCKEMKWLGNDGDIVFPSLK 302
            LP   S+ +I  C+       +S   H   L+ L   + +G + +  +      +F SL+
Sbjct: 705  LPEDVSSFSIGRCHDARSLCDVSPFKHATSLKSLGMWECDGIEFLASMSESSTDIFESLE 764

Query: 303  TLRLRHLPSF------EGLCKEKTHEE-TLKNLRKLYIYDCHKLKYLIPNDLLVNNLQNL 461
            +L L+ L +F      EG          T  +L+KL I +C  +K L+  DLL N L NL
Sbjct: 765  SLYLKTLKNFCVFITREGAAPPSWQSNGTFSHLKKLRIGECLSMKNLLALDLLPN-LTNL 823

Query: 462  EQIFIGRCDEMEDII--------------SGKGSATMASLPKLKTLKLFDLPSLTSIYHG 599
            E I +  CD+ME+II              S      + SLP LK LKL +LP L SI+HG
Sbjct: 824  EVIEVDDCDQMEEIIAAEDEEEGMMVEDSSSSSHYAVTSLPNLKALKLSNLPELESIFHG 883

Query: 600  KLVCDSL 620
            +++C S+
Sbjct: 884  EVICGSV 890



 Score = 40.0 bits (92), Expect(2) = 6e-18
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 709  CDSLYLMKIDNCPNLKELPFL----INKERPLSMRIVAREKWWERLEWEDAQLKELLQP 873
            C S+  + + NCPNLK +        N + PL       ++WWE +EW ++  K  L+P
Sbjct: 887  CGSVQEILVVNCPNLKRISLSHRNHANGQTPLRKIQAYPKEWWESVEWGNSNSKNALEP 945


>ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862190|gb|EEE99696.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1199

 Score = 70.9 bits (172), Expect(2) = 2e-17
 Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
 Frame = +3

Query: 156  MNIKTCNFIQLSDIFHWDDLRQLIYCKFEGCKEMKWLGNDGDIVFPSLKTLRLRHLPSFE 335
            ++ K  +   L D+   ++   L     +GC  MK L +        L       LPS+ 
Sbjct: 1000 LHCKCIDARNLGDVLSLENATDLQRIDIKGCNSMKSLVSSSWFYSAPLP------LPSYN 1053

Query: 336  GLCKEKTHEETLKNLRKLYIYDCHKLKYLIPNDLLVNNLQNLEQIFIGRCDEMEDIISGK 515
            G+            L++LY Y C  +K L P  +L++NL  LE+I +  C++ME+II   
Sbjct: 1054 GI---------FSGLKELYCYKCKSMKKLFPL-VLLSNLMYLERIQVQHCEKMEEIIGTT 1103

Query: 516  GSATMAS-------LPKLKTLKLFDLPSLTSIYHGKLVCDSL 620
               + +S       LPK + L+L +LP L SI   KL+CDSL
Sbjct: 1104 DEESSSSNSIMEFILPKFRILRLINLPELKSICSAKLICDSL 1145



 Score = 45.4 bits (106), Expect(2) = 2e-17
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 709  CDSLYLMKIDNCPNLKELPFLINKERPLSMRIVAREKWWERLEWEDAQLKELLQPFL 879
            CDSL  + +DNC  L+ LP  +       + +  +E W   +EWE+   KE+L PF+
Sbjct: 1142 CDSLEEIIVDNCQKLRRLPIRLLPPSLKKIEVYPKEWWESVVEWENPNAKEVLSPFV 1198


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