BLASTX nr result

ID: Dioscorea21_contig00015222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015222
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002960642.1| hypothetical protein SELMODRAFT_437689 [Sela...    90   2e-16
ref|XP_002983396.1| hypothetical protein SELMODRAFT_445508 [Sela...    90   2e-16
ref|XP_758625.1| hypothetical protein UM02478.1 [Ustilago maydis...    73   3e-11
dbj|GAC74756.1| proteins containing the RNA recognition motif [P...    72   4e-11
ref|XP_002900029.1| RNA-binding protein, putative [Phytophthora ...    72   6e-11

>ref|XP_002960642.1| hypothetical protein SELMODRAFT_437689 [Selaginella moellendorffii]
           gi|300171581|gb|EFJ38181.1| hypothetical protein
           SELMODRAFT_437689 [Selaginella moellendorffii]
          Length = 839

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/91 (47%), Positives = 61/91 (67%)
 Frame = +1

Query: 196 MRFDESLVADYLTNHLGPLTKADPVILAEYVVALLRNDKPKKELQKLCADSLAEFLGPST 375
           M+F++  +  YL  +L PLT ADP +LA YV ALL+N+KPK ELQ LC D L +FLG  T
Sbjct: 1   MKFEDGPLKSYLVKNLQPLTAADPALLANYVAALLKNNKPKPELQTLCVDKLFDFLGDGT 60

Query: 376 NSFITKLFQALEDGSIARSGERVDNMKKSEP 468
             F+T+LF+ +EDG++    E  D++  + P
Sbjct: 61  KQFVTQLFKDIEDGTLVEVPE--DSVSPAAP 89


>ref|XP_002983396.1| hypothetical protein SELMODRAFT_445508 [Selaginella moellendorffii]
           gi|300149081|gb|EFJ15738.1| hypothetical protein
           SELMODRAFT_445508 [Selaginella moellendorffii]
          Length = 839

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/91 (47%), Positives = 61/91 (67%)
 Frame = +1

Query: 196 MRFDESLVADYLTNHLGPLTKADPVILAEYVVALLRNDKPKKELQKLCADSLAEFLGPST 375
           M+F++  +  YL  +L PLT ADP +LA YV ALL+N+KPK ELQ LC D L +FLG  T
Sbjct: 1   MKFEDGPLKSYLVKNLQPLTAADPALLANYVAALLKNNKPKPELQTLCVDKLFDFLGDGT 60

Query: 376 NSFITKLFQALEDGSIARSGERVDNMKKSEP 468
             F+T+LF+ +EDG++    E  D++  + P
Sbjct: 61  KQFVTQLFKDIEDGTLVEVPE--DSVSPAAP 89


>ref|XP_758625.1| hypothetical protein UM02478.1 [Ustilago maydis 521]
           gi|46098283|gb|EAK83516.1| hypothetical protein
           UM02478.1 [Ustilago maydis 521]
          Length = 790

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
 Frame = +1

Query: 196 MRFDESLVAD---YLTNHLGPLTKADPVILAEYVVALLRNDKPKKELQKLCADSLAEFLG 366
           M F+ES   D   +LT+ LGP+  ADP +LA+YV+ALL+++ P+ ELQ L  + L +FL 
Sbjct: 1   MLFEESQTDDLKAWLTSELGPICDADPEVLADYVLALLKHEGPEAELQTLLTEQLEDFLA 60

Query: 367 PSTNSFITKLFQALEDGSIARSGERVDNMKKSE 465
             T SF++K FQA+ D +   + E     + S+
Sbjct: 61  AETASFVSKTFQAIADKAYLPASESAQANQSSD 93


>dbj|GAC74756.1| proteins containing the RNA recognition motif [Pseudozyma
           antarctica T-34]
          Length = 752

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = +1

Query: 196 MRFDESLVAD---YLTNHLGPLTKADPVILAEYVVALLRNDKPKKELQKLCADSLAEFLG 366
           M FDE+   D   +LT+ LGP+  ADP +LA+YV+ALL+++ P++ELQ +  + L +FL 
Sbjct: 1   MLFDEAHTDDIKAWLTSELGPICDADPEVLADYVLALLKHEGPEEELQSMLTEQLEDFLA 60

Query: 367 PSTNSFITKLFQALEDGS 420
             T  F+TK+F AL D S
Sbjct: 61  AETEPFVTKVFAALTDKS 78


>ref|XP_002900029.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
           gi|262102604|gb|EEY60656.1| RNA-binding protein,
           putative [Phytophthora infestans T30-4]
          Length = 588

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/97 (41%), Positives = 54/97 (55%)
 Frame = +1

Query: 184 MPGDMRFDESLVADYLTNHLGPLTKADPVILAEYVVALLRNDKPKKELQKLCADSLAEFL 363
           M GD   D+  + ++L   L P+  ADP +L++YV+AL++ND  K  LQ +C   L EFL
Sbjct: 1   MDGD---DKEFLREWLIRSLEPVCDADPEVLSKYVLALVQNDPQKPGLQDICVSKLEEFL 57

Query: 364 GPSTNSFITKLFQALEDGSIARSGERVDNMKKSEPSR 474
           G  T  F+ KLF AL DGS   +     N    E SR
Sbjct: 58  GDETAGFVAKLFTALADGSYKANNS--SNATSDEQSR 92


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