BLASTX nr result

ID: Dioscorea21_contig00015214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015214
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB47906.2| expressed protein [Oryza sativa Japonica Group]        149   5e-34
gb|ABB47907.2| expressed protein [Oryza sativa Japonica Group]        149   5e-34
tpg|DAA45990.1| TPA: photosynthetic electron transport2 [Zea mays]    146   4e-33
gb|ACF87409.1| unknown [Zea mays] gi|223975473|gb|ACN31924.1| un...   146   4e-33
ref|XP_002467630.1| hypothetical protein SORBIDRAFT_01g031180 [S...   145   5e-33

>gb|ABB47906.2| expressed protein [Oryza sativa Japonica Group]
          Length = 291

 Score =  149 bits (375), Expect = 5e-34
 Identities = 77/116 (66%), Positives = 90/116 (77%), Gaps = 5/116 (4%)
 Frame = +2

Query: 299 RRFRSPTAITNEDSDQEP-----QQQLNLSVLRFTLGIPGLDESYLPRWIGIACGSLIIL 463
           RR R P A     S  +P     QQQ+NLSVLRFTLGIPGLDESYLPRWIG+  G+L++L
Sbjct: 31  RRRRRPRAARVRASGSDPPPQQQQQQVNLSVLRFTLGIPGLDESYLPRWIGLGFGALVLL 90

Query: 464 NHLFSSSSPTPAQLRTEALGVFLAAFSATLPYLGKFLKGENPVERAPLPEGNKQIF 631
           NHL S S PTPAQLR+EALG+ LAAFSATLPYLG+FL+G    ER PLPEG++Q+F
Sbjct: 91  NHLLSPS-PTPAQLRSEALGLCLAAFSATLPYLGRFLEGAGAAERVPLPEGSRQVF 145


>gb|ABB47907.2| expressed protein [Oryza sativa Japonica Group]
          Length = 176

 Score =  149 bits (375), Expect = 5e-34
 Identities = 77/116 (66%), Positives = 90/116 (77%), Gaps = 5/116 (4%)
 Frame = +2

Query: 299 RRFRSPTAITNEDSDQEP-----QQQLNLSVLRFTLGIPGLDESYLPRWIGIACGSLIIL 463
           RR R P A     S  +P     QQQ+NLSVLRFTLGIPGLDESYLPRWIG+  G+L++L
Sbjct: 31  RRRRRPRAARVRASGSDPPPQQQQQQVNLSVLRFTLGIPGLDESYLPRWIGLGFGALVLL 90

Query: 464 NHLFSSSSPTPAQLRTEALGVFLAAFSATLPYLGKFLKGENPVERAPLPEGNKQIF 631
           NHL S S PTPAQLR+EALG+ LAAFSATLPYLG+FL+G    ER PLPEG++Q+F
Sbjct: 91  NHLLSPS-PTPAQLRSEALGLCLAAFSATLPYLGRFLEGAGAAERVPLPEGSRQVF 145


>tpg|DAA45990.1| TPA: photosynthetic electron transport2 [Zea mays]
          Length = 252

 Score =  146 bits (368), Expect = 4e-33
 Identities = 71/108 (65%), Positives = 86/108 (79%)
 Frame = +2

Query: 308 RSPTAITNEDSDQEPQQQLNLSVLRFTLGIPGLDESYLPRWIGIACGSLIILNHLFSSSS 487
           R    +    S   PQQQLNLSVLRFTLGIPGLDESYLPRWIG+  G+L++LNHL  S+S
Sbjct: 36  RRSLVLVRASSSDPPQQQLNLSVLRFTLGIPGLDESYLPRWIGLGFGALVVLNHLL-SAS 94

Query: 488 PTPAQLRTEALGVFLAAFSATLPYLGKFLKGENPVERAPLPEGNKQIF 631
           PTPAQLR+EA+G+ LAAFSATLP+LG+FL+G +   R PLPEG+ Q+F
Sbjct: 95  PTPAQLRSEAVGLCLAAFSATLPFLGRFLEGADAASRVPLPEGSIQVF 142


>gb|ACF87409.1| unknown [Zea mays] gi|223975473|gb|ACN31924.1| unknown [Zea mays]
           gi|414867434|tpg|DAA45991.1| TPA: photosynthetic
           electron transport2 isoform 1 [Zea mays]
           gi|414867435|tpg|DAA45992.1| TPA: photosynthetic
           electron transport2 isoform 2 [Zea mays]
           gi|414867436|tpg|DAA45993.1| TPA: photosynthetic
           electron transport2 isoform 3 [Zea mays]
          Length = 287

 Score =  146 bits (368), Expect = 4e-33
 Identities = 71/108 (65%), Positives = 86/108 (79%)
 Frame = +2

Query: 308 RSPTAITNEDSDQEPQQQLNLSVLRFTLGIPGLDESYLPRWIGIACGSLIILNHLFSSSS 487
           R    +    S   PQQQLNLSVLRFTLGIPGLDESYLPRWIG+  G+L++LNHL  S+S
Sbjct: 36  RRSLVLVRASSSDPPQQQLNLSVLRFTLGIPGLDESYLPRWIGLGFGALVVLNHLL-SAS 94

Query: 488 PTPAQLRTEALGVFLAAFSATLPYLGKFLKGENPVERAPLPEGNKQIF 631
           PTPAQLR+EA+G+ LAAFSATLP+LG+FL+G +   R PLPEG+ Q+F
Sbjct: 95  PTPAQLRSEAVGLCLAAFSATLPFLGRFLEGADAASRVPLPEGSIQVF 142


>ref|XP_002467630.1| hypothetical protein SORBIDRAFT_01g031180 [Sorghum bicolor]
           gi|241921484|gb|EER94628.1| hypothetical protein
           SORBIDRAFT_01g031180 [Sorghum bicolor]
          Length = 293

 Score =  145 bits (367), Expect = 5e-33
 Identities = 73/114 (64%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
 Frame = +2

Query: 293 RERRFRSPTAITNEDSD-QEPQQQLNLSVLRFTLGIPGLDESYLPRWIGIACGSLIILNH 469
           R R   S + +   +SD  + QQQ+NLSVLRFTLGIPGLDESYLPRWIG+  G+L++LNH
Sbjct: 36  RRRTLSSSSLVRASNSDPSQQQQQVNLSVLRFTLGIPGLDESYLPRWIGLGFGALVVLNH 95

Query: 470 LFSSSSPTPAQLRTEALGVFLAAFSATLPYLGKFLKGENPVERAPLPEGNKQIF 631
           L  S SPTPAQLR+EALG+ LAAFSATLP+LG+FL+G +   R PLPEG+ Q+F
Sbjct: 96  LI-SPSPTPAQLRSEALGLCLAAFSATLPFLGRFLEGADAASRVPLPEGSSQVF 148


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