BLASTX nr result

ID: Dioscorea21_contig00015211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015211
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571089.1| PREDICTED: nuclear pore complex protein Nup2...    57   1e-06
ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2...    56   3e-06
emb|CBI28192.3| unnamed protein product [Vitis vinifera]               56   3e-06
gb|EEE56517.1| hypothetical protein OsJ_05800 [Oryza sativa Japo...    55   6e-06

>ref|XP_003571089.1| PREDICTED: nuclear pore complex protein Nup205-like [Brachypodium
            distachyon]
          Length = 1824

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = +1

Query: 103  EDLSLLCGRLLPILERLEQLREDKMGHGLNLLHRAVAVLKEVSIRNMA 246
            +D+S     LLPILERLE L+EDK+G  L L HR+V  LKE+++R+M+
Sbjct: 1776 KDMSSFSDELLPILERLEHLKEDKVGRNLKLFHRSVTTLKELAVRSMS 1823


>ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis vinifera]
          Length = 1934

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/53 (47%), Positives = 37/53 (69%)
 Frame = +1

Query: 85   NKTGANEDLSLLCGRLLPILERLEQLREDKMGHGLNLLHRAVAVLKEVSIRNM 243
            +K    +D+S+ CG+L+P LERLE L EDK+GH L +  R V+ LKE+ I+ +
Sbjct: 1880 DKFDNGQDISVFCGKLIPTLERLELLSEDKVGHNLKVFRRLVSSLKELGIQKL 1932


>emb|CBI28192.3| unnamed protein product [Vitis vinifera]
          Length = 1889

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/53 (47%), Positives = 37/53 (69%)
 Frame = +1

Query: 85   NKTGANEDLSLLCGRLLPILERLEQLREDKMGHGLNLLHRAVAVLKEVSIRNM 243
            +K    +D+S+ CG+L+P LERLE L EDK+GH L +  R V+ LKE+ I+ +
Sbjct: 1835 DKFDNGQDISVFCGKLIPTLERLELLSEDKVGHNLKVFRRLVSSLKELGIQKL 1887


>gb|EEE56517.1| hypothetical protein OsJ_05800 [Oryza sativa Japonica Group]
          Length = 1961

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = +1

Query: 103  EDLSLLCGRLLPILERLEQLREDKMGHGLNLLHRAVAVLKEVSIRNMA 246
            +D+S     LLPILERLE   EDK+G  L L HR+V  LKE++IR+M+
Sbjct: 1913 KDISSFSDELLPILERLEHFTEDKVGRSLKLFHRSVTTLKEMTIRSMS 1960


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