BLASTX nr result

ID: Dioscorea21_contig00015172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015172
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR96015.1| putative RNA-binding protein [Musa acuminata]          142   3e-32
ref|XP_002450221.1| hypothetical protein SORBIDRAFT_05g002130 [S...   127   2e-27
emb|CBI18792.3| unnamed protein product [Vitis vinifera]              120   2e-25
gb|AFW64741.1| hypothetical protein ZEAMMB73_003429 [Zea mays]        117   2e-24
ref|XP_003635379.1| PREDICTED: HIV Tat-specific factor 1 homolog...   117   2e-24

>gb|AAR96015.1| putative RNA-binding protein [Musa acuminata]
          Length = 308

 Score =  142 bits (359), Expect = 3e-32
 Identities = 74/150 (49%), Positives = 86/150 (57%)
 Frame = +1

Query: 112 MESSGGVDYGAVTEAGWYILGDNQESLGPYAISELQDHFLSGYISESTFLWADGRSDWLP 291
           MESS    Y   TE GWYILG+NQE +GPYA+SELQ+HF +GYISE+T LW +GRS+W P
Sbjct: 1   MESSSDASYAVATEVGWYILGENQEHVGPYALSELQEHFANGYISENTLLWYEGRSEWAP 60

Query: 292 LSSIPELXXXXXXXXXXXXXXXDATDNDDDFTKWXXXXXXXXXXXXXXXXGTVRSGLGSV 471
           LSSIPEL               D  D DDDF KW                GT  S L   
Sbjct: 61  LSSIPEL-YAGTPIKKLDGSAADLPDEDDDFAKWQKEVQEAEAAAEALKNGTTTSVL--A 117

Query: 472 QQEESILEEADTGLDNRPATPPDGEEEFTD 561
           +  E + E    G D++P TPPDGEEEFTD
Sbjct: 118 EGGEGLQEGEGLGADDQPTTPPDGEEEFTD 147


>ref|XP_002450221.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
           gi|241936064|gb|EES09209.1| hypothetical protein
           SORBIDRAFT_05g002130 [Sorghum bicolor]
          Length = 469

 Score =  127 bits (318), Expect = 2e-27
 Identities = 70/150 (46%), Positives = 88/150 (58%)
 Frame = +1

Query: 112 MESSGGVDYGAVTEAGWYILGDNQESLGPYAISELQDHFLSGYISESTFLWADGRSDWLP 291
           ME+SG     A TE GWY+LG NQES+GPYA++ELQ+HF +GY++EST LWA+GR +W+P
Sbjct: 1   METSGAAAVAA-TEVGWYVLGPNQESVGPYALAELQEHFANGYLNESTMLWAEGRKEWMP 59

Query: 292 LSSIPELXXXXXXXXXXXXXXXDATDNDDDFTKWXXXXXXXXXXXXXXXXGTVRSGLGSV 471
           LSSIPEL               DA D DDDF K+                         V
Sbjct: 60  LSSIPEL---QSAVTSKDQSKQDAPDVDDDFEKFQK----------------------EV 94

Query: 472 QQEESILEEADTGLDNRPATPPDGEEEFTD 561
            + E+ +++ D   D RPATPPDGEEEFTD
Sbjct: 95  TEAEADVDQQD---DERPATPPDGEEEFTD 121


>emb|CBI18792.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/137 (43%), Positives = 77/137 (56%)
 Frame = +1

Query: 151 EAGWYILGDNQESLGPYAISELQDHFLSGYISESTFLWADGRSDWLPLSSIPELXXXXXX 330
           E GWYILG+NQ++LGPYA SEL++HFL+GY+SE++ LW++GRSDW PLSSIPEL      
Sbjct: 25  EVGWYILGENQQNLGPYAFSELREHFLNGYLSENSLLWSEGRSDWQPLSSIPELTTAISQ 84

Query: 331 XXXXXXXXXDATDNDDDFTKWXXXXXXXXXXXXXXXXGTVRSGLGSVQQEESILEEADTG 510
                       +++D+F KW                G+V    G    E          
Sbjct: 85  PGVDCSSAGPPINDEDEFEKWQKEVREAEALKNGSASGSVGGDFGDEDNE---------- 134

Query: 511 LDNRPATPPDGEEEFTD 561
              RP+TPPDGE+EFTD
Sbjct: 135 ---RPSTPPDGEDEFTD 148


>gb|AFW64741.1| hypothetical protein ZEAMMB73_003429 [Zea mays]
          Length = 475

 Score =  117 bits (292), Expect = 2e-24
 Identities = 64/142 (45%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
 Frame = +1

Query: 142 AVTEAGWYILGDNQESLGPYAISELQDHFLSGYISESTFLWADGRSDWLPLSSIPELXXX 321
           A TEAGWY+LG NQE +GPYA++EL++HF +GY +EST LWA+GR +W+PLSSI EL   
Sbjct: 9   AATEAGWYVLGPNQEGVGPYALAELREHFANGYFNESTMLWAEGRKEWMPLSSISEL--- 65

Query: 322 XXXXXXXXXXXXDATDNDDDFTKWXXXXXXXXXXXXXXXXGTVRSGLGSVQQEESILE-- 495
                       DA D DDDF K+                   +  +   + E   L+  
Sbjct: 66  HSAVAAKDQSEQDAPDVDDDFEKF-------------------QKEVIEAETEVKALKGN 106

Query: 496 EADTGLDNRPATPPDGEEEFTD 561
           + D   D RPATPPDGEEEFTD
Sbjct: 107 DVDQQDDERPATPPDGEEEFTD 128


>ref|XP_003635379.1| PREDICTED: HIV Tat-specific factor 1 homolog [Vitis vinifera]
          Length = 408

 Score =  117 bits (292), Expect = 2e-24
 Identities = 60/137 (43%), Positives = 76/137 (55%)
 Frame = +1

Query: 151 EAGWYILGDNQESLGPYAISELQDHFLSGYISESTFLWADGRSDWLPLSSIPELXXXXXX 330
           E GWYILG+NQ++LGPYA SEL++HFL+GY+SE++ LW++GRSDW PLSSIPEL      
Sbjct: 25  EVGWYILGENQQNLGPYAFSELREHFLNGYLSENSLLWSEGRSDWQPLSSIPELTTAISQ 84

Query: 331 XXXXXXXXXDATDNDDDFTKWXXXXXXXXXXXXXXXXGTVRSGLGSVQQEESILEEADTG 510
                    D    +D+F KW                G+V    G    E          
Sbjct: 85  PGVDWPPIND----EDEFEKWQKEVREAEALKNGSASGSVGGDFGDEDNE---------- 130

Query: 511 LDNRPATPPDGEEEFTD 561
              RP+TPPDGE+EFTD
Sbjct: 131 ---RPSTPPDGEDEFTD 144


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