BLASTX nr result

ID: Dioscorea21_contig00015141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015141
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...   151   1e-34
ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi...   149   5e-34
ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|2...   148   8e-34
ref|XP_002441400.1| hypothetical protein SORBIDRAFT_09g025930 [S...   146   3e-33
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin...   144   1e-32

>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
           gi|297743215|emb|CBI36082.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  151 bits (381), Expect = 1e-34
 Identities = 79/141 (56%), Positives = 100/141 (70%)
 Frame = +3

Query: 3   VLREFEKCGLILKHIPGPRGSNWMHILYQSGYDAHKALKKDGIQINNVLIIGVKPVDAAE 182
           VLREFEKCG+ILKH+PGPR +NW+HILYQ+  DA KAL K+G+QIN VLI+GVKP+D  +
Sbjct: 188 VLREFEKCGVILKHVPGPRDANWIHILYQNRSDAQKALSKNGMQINGVLIVGVKPLDPMQ 247

Query: 183 RQSLNEKLKNSTNGGFNILRPPQPATGKSSTVRSPFTATPHHRYPQNGNTVSIDSGRQAM 362
           RQ+LNE+L N    GF  L PP  +    S   +P   +P   Y QNG+     + RQ+ 
Sbjct: 248 RQALNERLNNQ---GFMTLPPPASSRSLES---NPLRVSPRPYYLQNGS-----NARQSS 296

Query: 363 GAIALPAKSVVLKVIDLMFGI 425
           GAIA PAKSVV K++DLMFG+
Sbjct: 297 GAIASPAKSVVSKIMDLMFGV 317


>ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis]
           gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative
           [Ricinus communis]
          Length = 332

 Score =  149 bits (376), Expect = 5e-34
 Identities = 82/142 (57%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   VLREFEKCGLILKHIPGPRGSNWMHILYQSGYDAHKALKKDGIQINNVLIIGVKPVDAAE 182
           VLREFEKCG+ILKH+PGPR +NWMHILYQS  DA KAL K+G+QIN VLI+GVKPVD  +
Sbjct: 202 VLREFEKCGVILKHVPGPRDANWMHILYQSRSDAQKALSKNGMQINGVLIVGVKPVDPMQ 261

Query: 183 RQSLNEKLKNSTNGGFNILRPPQPATGKSSTVRS-PFTATPHHRYPQNGNTVSIDSGRQA 359
           RQ+LNE+L N    GF  L  P P++ +SS +++   ++ P+H   QNG++    S RQ+
Sbjct: 262 RQALNERLNNQ---GFMTL--PPPSSSRSSELKTLGASSRPYH--IQNGSS----SARQS 310

Query: 360 MGAIALPAKSVVLKVIDLMFGI 425
            G+IA PAKSVV K+ D+MFGI
Sbjct: 311 GGSIASPAKSVVSKIFDVMFGI 332


>ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|222846990|gb|EEE84537.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  148 bits (374), Expect = 8e-34
 Identities = 83/142 (58%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   VLREFEKCGLILKHIPGPRGSNWMHILYQSGYDAHKALKKDGIQINNVLIIGVKPVDAAE 182
           VLREFEKCG+ILKH+PGPR +NWMHILYQS  DA KAL K+G+QIN VLIIGVK VD  +
Sbjct: 199 VLREFEKCGVILKHVPGPREANWMHILYQSRADAQKALSKNGMQINGVLIIGVKLVDPMQ 258

Query: 183 RQSLNEKLKNSTNGGFNILRPPQPA-TGKSSTVRSPFTATPHHRYPQNGNTVSIDSGRQA 359
           RQ+LNE++ N    GF  L PP    T  S+ +R    A+P   Y QNG+T    S RQ+
Sbjct: 259 RQALNERINNQ---GFMTLPPPSSTRTPDSNALR----ASPRPHYLQNGST----SARQS 307

Query: 360 MGAIALPAKSVVLKVIDLMFGI 425
            G IA PAKS+V K+ D+MFGI
Sbjct: 308 GGVIASPAKSMVSKIFDVMFGI 329


>ref|XP_002441400.1| hypothetical protein SORBIDRAFT_09g025930 [Sorghum bicolor]
           gi|241946685|gb|EES19830.1| hypothetical protein
           SORBIDRAFT_09g025930 [Sorghum bicolor]
          Length = 326

 Score =  146 bits (369), Expect = 3e-33
 Identities = 72/141 (51%), Positives = 96/141 (68%)
 Frame = +3

Query: 3   VLREFEKCGLILKHIPGPRGSNWMHILYQSGYDAHKALKKDGIQINNVLIIGVKPVDAAE 182
           VLREFEKCG+IL+H  GPR  NW+HILYQ  YDA KAL+K+GIQ+++ LI+GVKP+DA  
Sbjct: 186 VLREFEKCGVILRHHSGPRDGNWIHILYQRSYDAQKALQKNGIQLSSGLIVGVKPIDAVH 245

Query: 183 RQSLNEKLKNSTNGGFNILRPPQPATGKSSTVRSPFTATPHHRYPQNGNTVSIDSGRQAM 362
           RQ L+E    ++ GGF +  P +    KS+       A P    P+    VS D+GR+A 
Sbjct: 246 RQQLDESFVRNSQGGFMVSLPSKSLGLKSTGASHQLGALPRPYDPKASTNVSRDAGRRAT 305

Query: 363 GAIALPAKSVVLKVIDLMFGI 425
           G++A PAKS+V  V+DL+FGI
Sbjct: 306 GSVAAPAKSIVTNVMDLIFGI 326


>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
           gi|255639315|gb|ACU19955.1| unknown [Glycine max]
          Length = 331

 Score =  144 bits (364), Expect = 1e-32
 Identities = 78/141 (55%), Positives = 101/141 (71%)
 Frame = +3

Query: 3   VLREFEKCGLILKHIPGPRGSNWMHILYQSGYDAHKALKKDGIQINNVLIIGVKPVDAAE 182
           VLREFEKCG ILKH+PGPR +NWMHILYQ+  DAHKAL K+G+QIN VLI+GVK +D  +
Sbjct: 202 VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQ 261

Query: 183 RQSLNEKLKNSTNGGFNILRPPQPATGKSSTVRSPFTATPHHRYPQNGNTVSIDSGRQAM 362
           RQ+LNE+LKN    GF  L  P     + S++++P  + P+  Y QNGN+    + RQ  
Sbjct: 262 RQALNERLKNQ---GFMPLPLPSARNSEVSSLKAP--SRPY--YLQNGNS----TARQTG 310

Query: 363 GAIALPAKSVVLKVIDLMFGI 425
           G IA P KS+V K++DLMFG+
Sbjct: 311 GTIASPTKSLVSKIMDLMFGV 331


Top