BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015133
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   319   2e-85
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   319   2e-85
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   315   6e-84
ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymera...   314   1e-83
ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|2...   309   3e-82

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  319 bits (818), Expect = 2e-85
 Identities = 154/183 (84%), Positives = 161/183 (87%), Gaps = 1/183 (0%)
 Frame = +3

Query: 96  DGASPA-PPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFAISPFYDWTCNNEQLRLRSI 272
           DG  PA P PPGTDMTGICFRDQLWLNS+PLDRNLVFDYFA+SPFYDWTCNNEQLRLRSI
Sbjct: 19  DGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSI 78

Query: 273 HPLDLSHLSKMTGNEYMLCEVMEPHLFVIRKQRRDGPEKTTPLLAYYVLDGSIYQAPQLC 452
           HPLD SHLSKMTG EYML EVMEPHLFVIRKQ+RDGPEK TP+L YY+LDGSIYQAPQLC
Sbjct: 79  HPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC 138

Query: 453 NVFAARIGRALYHISKAFTLTASKLEKIGYVDTENEGTNSDGKTGKETIDMKELKRVDHI 632
           NVF ARIGRALYHISKAFT  ASKLEKIGYVD ENE    + K GKETID KE+ RVD I
Sbjct: 139 NVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQI 198

Query: 633 LAS 641
           LAS
Sbjct: 199 LAS 201


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  319 bits (818), Expect = 2e-85
 Identities = 154/183 (84%), Positives = 161/183 (87%), Gaps = 1/183 (0%)
 Frame = +3

Query: 96  DGASPAPP-PPGTDMTGICFRDQLWLNSFPLDRNLVFDYFAISPFYDWTCNNEQLRLRSI 272
           DG  PA P PPGTDMTGICFRDQLWLNS+PLDRNLVFDYFA+SPFYDWTCNNEQLRLRSI
Sbjct: 14  DGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSI 73

Query: 273 HPLDLSHLSKMTGNEYMLCEVMEPHLFVIRKQRRDGPEKTTPLLAYYVLDGSIYQAPQLC 452
           HPLD SHLSKMTG EYML EVMEPHLFVIRKQ+RDGPEK TP+L YY+LDGSIYQAPQLC
Sbjct: 74  HPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC 133

Query: 453 NVFAARIGRALYHISKAFTLTASKLEKIGYVDTENEGTNSDGKTGKETIDMKELKRVDHI 632
           NVF ARIGRALYHISKAFT  ASKLEKIGYVD ENE    + K GKETID KE+ RVD I
Sbjct: 134 NVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQI 193

Query: 633 LAS 641
           LAS
Sbjct: 194 LAS 196


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  315 bits (806), Expect = 6e-84
 Identities = 151/180 (83%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = +3

Query: 105 SPAPP-PPGTDMTGICFRDQLWLNSFPLDRNLVFDYFAISPFYDWTCNNEQLRLRSIHPL 281
           +PAPP PPGTDMTGICFRDQLWLN++PLDRNL+FDYFA+SPFYDWTCNNEQLRL+SIHPL
Sbjct: 16  APAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQSIHPL 75

Query: 282 DLSHLSKMTGNEYMLCEVMEPHLFVIRKQRRDGPEKTTPLLAYYVLDGSIYQAPQLCNVF 461
           DLSHLSKMTG EYML EV+EP+LFVIRKQ+RD PEK TP+L YYVLDGSIYQAPQLCNVF
Sbjct: 76  DLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVF 135

Query: 462 AARIGRALYHISKAFTLTASKLEKIGYVDTENEGTNSDGKTGKETIDMKELKRVDHILAS 641
           AARIGRALYHISKAFT  ASKLEKIGYVD E EG  S+ K GKE ID KE+KR+DHILAS
Sbjct: 136 AARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKRIDHILAS 194


>ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6-like [Glycine max]
          Length = 252

 Score =  314 bits (804), Expect = 1e-83
 Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 3/187 (1%)
 Frame = +3

Query: 90  IVDGASPAPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFAISPFYDWTCNNEQLRLRS 269
           +++G   AP PPGTDMTGICFRDQLWLNSFPLDRNLVFDYFA+SPFYDWTCNNEQLR+RS
Sbjct: 9   MLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRS 68

Query: 270 IHPLDLSHLSKMTGNEYMLCEVMEPHLFVIRKQRRDGPEKTTPLLAYYVLDGSIYQAPQL 449
           +HPLD+S LSKMTG EYML EVMEPHLFVIRKQ+RD P+K TP+LAYYVLDGSIYQAPQL
Sbjct: 69  VHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQL 128

Query: 450 CNVFAARIGRALYHISKAFTLTASKLEKIGY---VDTENEGTNSDGKTGKETIDMKELKR 620
           CNVFAARIGRALY+I KAFT  ASKLEKIGY    D+ENE    + KT KETID+KE+KR
Sbjct: 129 CNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKEVKR 188

Query: 621 VDHILAS 641
           VDHILAS
Sbjct: 189 VDHILAS 195


>ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|222874599|gb|EEF11730.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  309 bits (791), Expect = 3e-82
 Identities = 145/178 (81%), Positives = 158/178 (88%)
 Frame = +3

Query: 108 PAPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFAISPFYDWTCNNEQLRLRSIHPLDL 287
           P   PPGTDMTGICFRDQLWLN++PLDRNLVFDYFA+SPFYDWTCNNEQLR +SIHPLDL
Sbjct: 1   PPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDL 60

Query: 288 SHLSKMTGNEYMLCEVMEPHLFVIRKQRRDGPEKTTPLLAYYVLDGSIYQAPQLCNVFAA 467
           SHL KMTG EYML EVMEPHLFV RKQ+RD  EK TP+L YYVLDGSIYQAPQLC+VFAA
Sbjct: 61  SHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAA 120

Query: 468 RIGRALYHISKAFTLTASKLEKIGYVDTENEGTNSDGKTGKETIDMKELKRVDHILAS 641
           R+GRALY+ISKAF   ASKLEKIGYVD+ENEG  S+ KTGKE ID KE+KR+DHILAS
Sbjct: 121 RVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILAS 178