BLASTX nr result

ID: Dioscorea21_contig00015127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015127
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001067936.1| Os11g0496500 [Oryza sativa Japonica Group] g...    65   6e-09
ref|XP_002283942.1| PREDICTED: uncharacterized protein LOC100247...    64   1e-08
ref|XP_002298634.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002328877.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AFK47378.1| unknown [Lotus japonicus]                               64   2e-08

>ref|NP_001067936.1| Os11g0496500 [Oryza sativa Japonica Group]
           gi|113645158|dbj|BAF28299.1| Os11g0496500 [Oryza sativa
           Japonica Group] gi|125534453|gb|EAY81001.1| hypothetical
           protein OsI_36184 [Oryza sativa Indica Group]
           gi|215693123|dbj|BAG88505.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218185781|gb|EEC68208.1| hypothetical protein
           OsI_36188 [Oryza sativa Indica Group]
           gi|222616001|gb|EEE52133.1| hypothetical protein
           OsJ_33960 [Oryza sativa Japonica Group]
          Length = 69

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -1

Query: 378 RMAEFGTLHTSGASILVHSIIYFALISIFLLAVQVHMYIG 259
           R+ EFG   TSG SILVHSIIYFALI+IFLLAV VHMY+G
Sbjct: 30  RIVEFGNFQTSGLSILVHSIIYFALIAIFLLAVNVHMYLG 69


>ref|XP_002283942.1| PREDICTED: uncharacterized protein LOC100247554 [Vitis vinifera]
          Length = 141

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = -1

Query: 378 RMAEFGTLHTSGASILVHSIIYFALISIFLLAVQVHMYIG 259
           R+ EFG++HTSGASILVH+IIYF LI+IFL+A+ VH+Y G
Sbjct: 102 RVVEFGSMHTSGASILVHTIIYFGLITIFLIAIGVHIYTG 141


>ref|XP_002298634.1| predicted protein [Populus trichocarpa]
           gi|224055751|ref|XP_002298635.1| predicted protein
           [Populus trichocarpa] gi|222845892|gb|EEE83439.1|
           predicted protein [Populus trichocarpa]
           gi|222845893|gb|EEE83440.1| predicted protein [Populus
           trichocarpa]
          Length = 70

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 378 RMAEFGTLHTSGASILVHSIIYFALISIFLLAVQVHMYIGS 256
           R+ EFG   TSG SILVHSI+YFALI IFLLAV VH+Y+GS
Sbjct: 30  RLVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYVGS 70


>ref|XP_002328877.1| predicted protein [Populus trichocarpa] gi|222839307|gb|EEE77644.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -1

Query: 378 RMAEFGTLHTSGASILVHSIIYFALISIFLLAVQVHMYIGS 256
           R  EFG   TSG SILVHSI+YFALI IFLLAV VHMY+GS
Sbjct: 30  RFIEFGNFKTSGVSILVHSILYFALICIFLLAVGVHMYVGS 70


>gb|AFK47378.1| unknown [Lotus japonicus]
          Length = 69

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = -1

Query: 378 RMAEFGTLHTSGASILVHSIIYFALISIFLLAVQVHMYIG 259
           RM EFG   TSGASILVHSI+YF L+ IFLLA+ VHMY+G
Sbjct: 30  RMVEFGNFQTSGASILVHSILYFVLVCIFLLAIGVHMYMG 69


Top