BLASTX nr result

ID: Dioscorea21_contig00015117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015117
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS83605.1| ATP synthase epsilon subunit 1 [Gossypium hirsutum]    113   1e-23
gb|ACG35728.1| ATP synthase epsilon chain, mitochondrial [Zea ma...   107   1e-21
ref|XP_003531766.1| PREDICTED: ATP synthase subunit epsilon, mit...   106   2e-21
ref|XP_002274249.1| PREDICTED: ATP synthase subunit epsilon, mit...   106   2e-21
ref|NP_001105595.1| ATP synthase subunit epsilon, mitochondrial ...   105   3e-21

>gb|ACS83605.1| ATP synthase epsilon subunit 1 [Gossypium hirsutum]
          Length = 70

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/69 (72%), Positives = 61/69 (88%)
 Frame = +2

Query: 146 TMSSAVPFWRAAGMTYIGYSNMVAGAVRKCLKEPYRSEAVNREKVHFTISKWSQGKPEKP 325
           T ++AVPFWRAAGMTYI YSN+ A  VR CLKEPY++EA++REKVHF+ISKW+ GKPEKP
Sbjct: 2   TSNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEALSREKVHFSISKWTDGKPEKP 61

Query: 326 SARTDSPEE 352
           + R+DSPEE
Sbjct: 62  TIRSDSPEE 70


>gb|ACG35728.1| ATP synthase epsilon chain, mitochondrial [Zea mays]
           gi|414881794|tpg|DAA58925.1| TPA: ATP synthase epsilon
           chain [Zea mays]
          Length = 70

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/70 (67%), Positives = 59/70 (84%)
 Frame = +2

Query: 140 IATMSSAVPFWRAAGMTYIGYSNMVAGAVRKCLKEPYRSEAVNREKVHFTISKWSQGKPE 319
           ++  ++AVPFWRAAGMTYIGYSN+ A  VR CLKEP++SEA +REKVHF+ISKW+ GK E
Sbjct: 1   MSATTAAVPFWRAAGMTYIGYSNICAALVRNCLKEPFKSEAASREKVHFSISKWTDGKQE 60

Query: 320 KPSARTDSPE 349
           KP+ RT+S E
Sbjct: 61  KPTVRTESDE 70


>ref|XP_003531766.1| PREDICTED: ATP synthase subunit epsilon, mitochondrial isoform 1
           [Glycine max] gi|255625935|gb|ACU13312.1| unknown
           [Glycine max]
          Length = 70

 Score =  106 bits (265), Expect = 2e-21
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = +2

Query: 152 SSAVPFWRAAGMTYIGYSNMVAGAVRKCLKEPYRSEAVNREKVHFTISKWSQGKPEKPSA 331
           S AVPFWRAAGMTYI YSN+ A  VR CLKEPY++EA++REKVHF +SKW   KPEKP+ 
Sbjct: 4   SGAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEAISREKVHFALSKWVDAKPEKPTI 63

Query: 332 RTDSPEE 352
           R+D+PE+
Sbjct: 64  RSDTPEQ 70


>ref|XP_002274249.1| PREDICTED: ATP synthase subunit epsilon, mitochondrial isoform 1
           [Vitis vinifera]
          Length = 75

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = +2

Query: 155 SAVPFWRAAGMTYIGYSNMVAGAVRKCLKEPYRSEAVNREKVHFTISKWSQGKPEKPSAR 334
           +AVPFWRAAGMTYI YSN+ A  VR CLKEP++SEA+ REKVHF+ISKW  G P+KP+ R
Sbjct: 9   AAVPFWRAAGMTYISYSNICANMVRNCLKEPFKSEALTREKVHFSISKWDNGVPQKPTIR 68

Query: 335 TDSPEE 352
           +D+PEE
Sbjct: 69  SDTPEE 74


>ref|NP_001105595.1| ATP synthase subunit epsilon, mitochondrial [Zea mays]
           gi|2493053|sp|Q41898.1|ATP5E_MAIZE RecName: Full=ATP
           synthase subunit epsilon, mitochondrial; Short=ATPase
           subunit epsilon gi|639793|gb|AAA86819.1| mitochondrial
           F1F0 ATP synthase epsilon subunit [Zea mays]
           gi|195617870|gb|ACG30765.1| ATP synthase epsilon chain,
           mitochondrial [Zea mays] gi|195618392|gb|ACG31026.1| ATP
           synthase epsilon chain, mitochondrial [Zea mays]
           gi|195618528|gb|ACG31094.1| ATP synthase epsilon chain,
           mitochondrial [Zea mays] gi|195656961|gb|ACG47948.1| ATP
           synthase epsilon chain, mitochondrial [Zea mays]
           gi|413950567|gb|AFW83216.1| ATP synthase subunit epsilon
           [Zea mays]
          Length = 70

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/70 (65%), Positives = 59/70 (84%)
 Frame = +2

Query: 140 IATMSSAVPFWRAAGMTYIGYSNMVAGAVRKCLKEPYRSEAVNREKVHFTISKWSQGKPE 319
           ++  ++AVPFWRAAGMTYIGYSN+ A  VR CLKEP++SEA +REKVHF+ISKW+ GK E
Sbjct: 1   MSATTAAVPFWRAAGMTYIGYSNICAALVRNCLKEPFKSEAASREKVHFSISKWTDGKQE 60

Query: 320 KPSARTDSPE 349
           KP+ RT+S +
Sbjct: 61  KPTVRTESDD 70


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