BLASTX nr result

ID: Dioscorea21_contig00015093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015093
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group] g...   132   5e-29
ref|XP_002305996.1| high mobility group family [Populus trichoca...   132   7e-29
ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus...   131   1e-28
gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indi...   130   2e-28
ref|NP_001151622.1| HMG1/2-like protein [Zea mays] gi|195648164|...   130   3e-28

>ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group]
           gi|56202161|dbj|BAD73639.1| HMG protein-like [Oryza
           sativa Japonica Group] gi|125527174|gb|EAY75288.1|
           hypothetical protein OsI_03176 [Oryza sativa Indica
           Group] gi|215693961|dbj|BAG89148.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255673529|dbj|BAF05713.2| Os01g0666200 [Oryza sativa
           Japonica Group]
          Length = 133

 Score =  132 bits (333), Expect = 5e-29
 Identities = 64/107 (59%), Positives = 81/107 (75%)
 Frame = +1

Query: 160 PIKTPAMRAKPLQKRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKSM 339
           P+K P  +  P Q + P +R++    VD        TAFFYF+EDFRK +KEENP+VKSM
Sbjct: 19  PVK-PRPKPPPPQPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSM 77

Query: 340 REIGKACGEKWKTMPFGEKVKYYDIATEKRAEFEKAMAEFIRRKENG 480
           +E+GKACGEKW TM F E+VKYYDIATEKRAE+EKA+AEF ++KE+G
Sbjct: 78  QEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKKKESG 124


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  132 bits (332), Expect = 7e-29
 Identities = 60/94 (63%), Positives = 77/94 (81%)
 Frame = +1

Query: 199 KRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKSMREIGKACGEKWKT 378
           +R+P+++ +   K D        TAFFYFLEDFRK F+E+NP+VKSMRE+GKACGEKWKT
Sbjct: 59  ERRPKSKTKKNKKFDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKT 118

Query: 379 MPFGEKVKYYDIATEKRAEFEKAMAEFIRRKENG 480
           M + EKVKYYDIATEKRAEF++A +E+I+RKE+G
Sbjct: 119 MTYEEKVKYYDIATEKRAEFDRATSEYIKRKESG 152


>ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 198

 Score =  131 bits (330), Expect = 1e-28
 Identities = 66/100 (66%), Positives = 82/100 (82%)
 Frame = +1

Query: 181 RAKPLQKRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKSMREIGKAC 360
           RAKP    K  ++R++A K+D+       TAFFYFLEDFRK F+++NP+VKSMREIGKAC
Sbjct: 91  RAKP----KRISKRQIA-KLDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKAC 145

Query: 361 GEKWKTMPFGEKVKYYDIATEKRAEFEKAMAEFIRRKENG 480
           GEKWK M + EKVKYYDIATEKRAEF+KAMAE+I++KE+G
Sbjct: 146 GEKWKMMTYEEKVKYYDIATEKRAEFDKAMAEYIKKKESG 185


>gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indica Group]
          Length = 133

 Score =  130 bits (328), Expect = 2e-28
 Identities = 63/107 (58%), Positives = 80/107 (74%)
 Frame = +1

Query: 160 PIKTPAMRAKPLQKRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKSM 339
           P+K P  +  P Q + P +R++    VD        TAFFYF+EDFRK +KEENP+VKSM
Sbjct: 19  PVK-PRPKPPPPQPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSM 77

Query: 340 REIGKACGEKWKTMPFGEKVKYYDIATEKRAEFEKAMAEFIRRKENG 480
           +E+GKACGEKW TM F E+VKYYDIATEKRAE+EK +AEF ++KE+G
Sbjct: 78  QEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKPVAEFDKKKESG 124


>ref|NP_001151622.1| HMG1/2-like protein [Zea mays] gi|195648164|gb|ACG43550.1|
           HMG1/2-like protein [Zea mays]
           gi|414881086|tpg|DAA58217.1| TPA: HMG1/2-like protein
           [Zea mays]
          Length = 115

 Score =  130 bits (326), Expect = 3e-28
 Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = +1

Query: 160 PIKTPAMRAKPLQ-KRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKS 336
           P+KT AM  +P   KRKP  R + A K D        TAFFYF+EDFRK +K+E P+VKS
Sbjct: 11  PLKTVAMAPRPSSTKRKP--RPKPAGKGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKS 68

Query: 337 MREIGKACGEKWKTMPFGEKVKYYDIATEKRAEFEKAMAEFIRRKEN 477
           M+EIGKACGEKW TM F EKVKYYDIATEKRAEFEKAM E+ ++KE+
Sbjct: 69  MQEIGKACGEKWNTMTFEEKVKYYDIATEKRAEFEKAMIEYNKKKES 115


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