BLASTX nr result
ID: Dioscorea21_contig00015093
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00015093 (695 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group] g... 132 5e-29 ref|XP_002305996.1| high mobility group family [Populus trichoca... 132 7e-29 ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus... 131 1e-28 gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indi... 130 2e-28 ref|NP_001151622.1| HMG1/2-like protein [Zea mays] gi|195648164|... 130 3e-28 >ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group] gi|56202161|dbj|BAD73639.1| HMG protein-like [Oryza sativa Japonica Group] gi|125527174|gb|EAY75288.1| hypothetical protein OsI_03176 [Oryza sativa Indica Group] gi|215693961|dbj|BAG89148.1| unnamed protein product [Oryza sativa Japonica Group] gi|255673529|dbj|BAF05713.2| Os01g0666200 [Oryza sativa Japonica Group] Length = 133 Score = 132 bits (333), Expect = 5e-29 Identities = 64/107 (59%), Positives = 81/107 (75%) Frame = +1 Query: 160 PIKTPAMRAKPLQKRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKSM 339 P+K P + P Q + P +R++ VD TAFFYF+EDFRK +KEENP+VKSM Sbjct: 19 PVK-PRPKPPPPQPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSM 77 Query: 340 REIGKACGEKWKTMPFGEKVKYYDIATEKRAEFEKAMAEFIRRKENG 480 +E+GKACGEKW TM F E+VKYYDIATEKRAE+EKA+AEF ++KE+G Sbjct: 78 QEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKKKESG 124 >ref|XP_002305996.1| high mobility group family [Populus trichocarpa] gi|222848960|gb|EEE86507.1| high mobility group family [Populus trichocarpa] Length = 165 Score = 132 bits (332), Expect = 7e-29 Identities = 60/94 (63%), Positives = 77/94 (81%) Frame = +1 Query: 199 KRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKSMREIGKACGEKWKT 378 +R+P+++ + K D TAFFYFLEDFRK F+E+NP+VKSMRE+GKACGEKWKT Sbjct: 59 ERRPKSKTKKNKKFDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKT 118 Query: 379 MPFGEKVKYYDIATEKRAEFEKAMAEFIRRKENG 480 M + EKVKYYDIATEKRAEF++A +E+I+RKE+G Sbjct: 119 MTYEEKVKYYDIATEKRAEFDRATSEYIKRKESG 152 >ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis] gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B, putative [Ricinus communis] Length = 198 Score = 131 bits (330), Expect = 1e-28 Identities = 66/100 (66%), Positives = 82/100 (82%) Frame = +1 Query: 181 RAKPLQKRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKSMREIGKAC 360 RAKP K ++R++A K+D+ TAFFYFLEDFRK F+++NP+VKSMREIGKAC Sbjct: 91 RAKP----KRISKRQIA-KLDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKAC 145 Query: 361 GEKWKTMPFGEKVKYYDIATEKRAEFEKAMAEFIRRKENG 480 GEKWK M + EKVKYYDIATEKRAEF+KAMAE+I++KE+G Sbjct: 146 GEKWKMMTYEEKVKYYDIATEKRAEFDKAMAEYIKKKESG 185 >gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indica Group] Length = 133 Score = 130 bits (328), Expect = 2e-28 Identities = 63/107 (58%), Positives = 80/107 (74%) Frame = +1 Query: 160 PIKTPAMRAKPLQKRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKSM 339 P+K P + P Q + P +R++ VD TAFFYF+EDFRK +KEENP+VKSM Sbjct: 19 PVK-PRPKPPPPQPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSM 77 Query: 340 REIGKACGEKWKTMPFGEKVKYYDIATEKRAEFEKAMAEFIRRKENG 480 +E+GKACGEKW TM F E+VKYYDIATEKRAE+EK +AEF ++KE+G Sbjct: 78 QEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKPVAEFDKKKESG 124 >ref|NP_001151622.1| HMG1/2-like protein [Zea mays] gi|195648164|gb|ACG43550.1| HMG1/2-like protein [Zea mays] gi|414881086|tpg|DAA58217.1| TPA: HMG1/2-like protein [Zea mays] Length = 115 Score = 130 bits (326), Expect = 3e-28 Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 1/107 (0%) Frame = +1 Query: 160 PIKTPAMRAKPLQ-KRKPQARRRLAVKVDTXXXXXXXTAFFYFLEDFRKPFKEENPNVKS 336 P+KT AM +P KRKP R + A K D TAFFYF+EDFRK +K+E P+VKS Sbjct: 11 PLKTVAMAPRPSSTKRKP--RPKPAGKGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKS 68 Query: 337 MREIGKACGEKWKTMPFGEKVKYYDIATEKRAEFEKAMAEFIRRKEN 477 M+EIGKACGEKW TM F EKVKYYDIATEKRAEFEKAM E+ ++KE+ Sbjct: 69 MQEIGKACGEKWNTMTFEEKVKYYDIATEKRAEFEKAMIEYNKKKES 115