BLASTX nr result

ID: Dioscorea21_contig00015070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015070
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinife...   346   5e-93
ref|NP_001236933.1| uncharacterized protein LOC100500109 [Glycin...   337   3e-90
gb|AFK47180.1| unknown [Lotus japonicus]                              336   5e-90
ref|XP_004137675.1| PREDICTED: elongation factor P-like [Cucumis...   334   2e-89
ref|XP_002323076.1| predicted protein [Populus trichocarpa] gi|2...   334   2e-89

>ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinifera]
           gi|297735541|emb|CBI18035.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  346 bits (887), Expect = 5e-93
 Identities = 168/221 (76%), Positives = 195/221 (88%)
 Frame = -1

Query: 877 SSRSAPTSLPMLRSGFPMKARVLAPMPLRSRFPRIYAFSSNDIKVGSNIEVDGAPWRVLE 698
           SS S+  SL    S  PM  R   P P RSRF +I AF+SNDIKVGS+IEVDGAPW+VLE
Sbjct: 18  SSSSSSLSLSSKLSVLPM--RCAPPRPYRSRFSKILAFTSNDIKVGSSIEVDGAPWKVLE 75

Query: 697 FLHVKPGKGAAFVRTKVRNYITGNTVDKTFRAGSTIAEANVIKETKQYTYKDGSQYVFMD 518
           FLHVKPGKGAAFVRTK+RNY+TGNTVDKTFRAG +I EANV KETKQYTYKDG+Q+VFMD
Sbjct: 76  FLHVKPGKGAAFVRTKMRNYVTGNTVDKTFRAGCSIDEANVYKETKQYTYKDGAQFVFMD 135

Query: 517 LASYEESRLSEAEVGDKKKWLKEGMDCILLFWNGRVIDFELPITVKLTVVDVDPGVKGDT 338
           L+++EE RL+E++VG++ KWLKEGMDC +LFWNG++IDFELPIT+KLTVVDVDPG+KGDT
Sbjct: 136 LSTFEEIRLNESDVGERTKWLKEGMDCNVLFWNGKIIDFELPITIKLTVVDVDPGIKGDT 195

Query: 337 AQGGSKPATLDTGAVVNVPLFINTGEEILVDTRTGQYMSRA 215
           AQGGSKPATLDTGAVVNVPLF+N G++ILVDTRTG+Y SRA
Sbjct: 196 AQGGSKPATLDTGAVVNVPLFVNIGDQILVDTRTGEYRSRA 236


>ref|NP_001236933.1| uncharacterized protein LOC100500109 [Glycine max]
           gi|255629257|gb|ACU14973.1| unknown [Glycine max]
          Length = 233

 Score =  337 bits (863), Expect = 3e-90
 Identities = 166/232 (71%), Positives = 194/232 (83%), Gaps = 1/232 (0%)
 Frame = -1

Query: 907 MAGMAAA-LRFSSRSAPTSLPMLRSGFPMKARVLAPMPLRSRFPRIYAFSSNDIKVGSNI 731
           +AG A   L  S+ S+P S     S FP +  +  P   + RF RIYA +SNDIKVG+N+
Sbjct: 2   VAGTATLKLSLSAFSSPMSNFSASSSFPSRLPMRTPSSSKPRFLRIYALTSNDIKVGTNL 61

Query: 730 EVDGAPWRVLEFLHVKPGKGAAFVRTKVRNYITGNTVDKTFRAGSTIAEANVIKETKQYT 551
           EVDGAPWRVLEFLHVKPGK AAFVRTK++NYITGNTV+KTFRAGS+I +A+V KETKQ+T
Sbjct: 62  EVDGAPWRVLEFLHVKPGKDAAFVRTKMKNYITGNTVEKTFRAGSSIEQADVFKETKQFT 121

Query: 550 YKDGSQYVFMDLASYEESRLSEAEVGDKKKWLKEGMDCILLFWNGRVIDFELPITVKLTV 371
           YKDG+Q+VFMDL +YEE RL E E+GD+ KWLKEGMDC LL WNG+VID ELPIT+KL V
Sbjct: 122 YKDGAQFVFMDLNTYEEFRLGEKEIGDRTKWLKEGMDCNLLLWNGKVIDVELPITIKLAV 181

Query: 370 VDVDPGVKGDTAQGGSKPATLDTGAVVNVPLFINTGEEILVDTRTGQYMSRA 215
           VDVDPG+KGDTAQGG+KPATLDTGAVVNVPLF+N G+EILVD+RTGQYMSRA
Sbjct: 182 VDVDPGLKGDTAQGGTKPATLDTGAVVNVPLFVNVGDEILVDSRTGQYMSRA 233


>gb|AFK47180.1| unknown [Lotus japonicus]
          Length = 229

 Score =  336 bits (861), Expect = 5e-90
 Identities = 166/234 (70%), Positives = 197/234 (84%)
 Frame = -1

Query: 916 RTRMAGMAAALRFSSRSAPTSLPMLRSGFPMKARVLAPMPLRSRFPRIYAFSSNDIKVGS 737
           R  ++  +++LRF+S S+ +S P   S  PM+     P     RF +IYA +SNDIKVGS
Sbjct: 2   RLSLSASSSSLRFAS-SSYSSFPSNPSLLPMRNPSSKP-----RFFKIYALTSNDIKVGS 55

Query: 736 NIEVDGAPWRVLEFLHVKPGKGAAFVRTKVRNYITGNTVDKTFRAGSTIAEANVIKETKQ 557
           N+EVDGAPWRVLEFLHVKPGKGAAFVRTK++NY+TGNTVDKTFRAGS+I +A+++KETKQ
Sbjct: 56  NVEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYLTGNTVDKTFRAGSSIEQADILKETKQ 115

Query: 556 YTYKDGSQYVFMDLASYEESRLSEAEVGDKKKWLKEGMDCILLFWNGRVIDFELPITVKL 377
           +TYKDGSQ+VFMDL SYEE RL E ++GD+ KWLKEGMDC +L WNG+VID +LPITVKL
Sbjct: 116 FTYKDGSQFVFMDLNSYEEVRLDEKDIGDRTKWLKEGMDCSILLWNGKVIDIDLPITVKL 175

Query: 376 TVVDVDPGVKGDTAQGGSKPATLDTGAVVNVPLFINTGEEILVDTRTGQYMSRA 215
           TVVDVDPG+KGDTAQGGSKP TLDTGAVVNVPLF+N G+EILVDTR G YMSRA
Sbjct: 176 TVVDVDPGLKGDTAQGGSKPTTLDTGAVVNVPLFVNVGDEILVDTRNGVYMSRA 229


>ref|XP_004137675.1| PREDICTED: elongation factor P-like [Cucumis sativus]
           gi|449523916|ref|XP_004168969.1| PREDICTED: elongation
           factor P-like [Cucumis sativus]
          Length = 235

 Score =  334 bits (857), Expect = 2e-89
 Identities = 164/223 (73%), Positives = 192/223 (86%)
 Frame = -1

Query: 883 RFSSRSAPTSLPMLRSGFPMKARVLAPMPLRSRFPRIYAFSSNDIKVGSNIEVDGAPWRV 704
           R SS     SLP+     P+  R  +P   R+ F RIYA +SNDIKVG+NIEVDGAPWRV
Sbjct: 18  RTSSSKTSLSLPLK----PLALRSFSPSS-RTGFFRIYALTSNDIKVGTNIEVDGAPWRV 72

Query: 703 LEFLHVKPGKGAAFVRTKVRNYITGNTVDKTFRAGSTIAEANVIKETKQYTYKDGSQYVF 524
           LEFLHVKPGKGAAFVRTK+RNY+TGNTV+KTFRAGS++ EANV KE KQ+TYKDGSQ+VF
Sbjct: 73  LEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYKEVKQFTYKDGSQFVF 132

Query: 523 MDLASYEESRLSEAEVGDKKKWLKEGMDCILLFWNGRVIDFELPITVKLTVVDVDPGVKG 344
           MDL +YEE RL+ A+VGD+ KWLKEGMDCI+LFWNG+VIDFE+PIT++LTVVDVDPG+KG
Sbjct: 133 MDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDVDPGLKG 192

Query: 343 DTAQGGSKPATLDTGAVVNVPLFINTGEEILVDTRTGQYMSRA 215
           DTAQGGSKPATL+TGAVV+VPLFIN G+ I++DTRTGQY SRA
Sbjct: 193 DTAQGGSKPATLETGAVVSVPLFINVGDSIVIDTRTGQYTSRA 235


>ref|XP_002323076.1| predicted protein [Populus trichocarpa] gi|222867706|gb|EEF04837.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  334 bits (856), Expect = 2e-89
 Identities = 161/185 (87%), Positives = 175/185 (94%)
 Frame = -1

Query: 769 AFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKVRNYITGNTVDKTFRAGSTI 590
           A SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTK+RNY+TGNTVDKTFRAGSTI
Sbjct: 1   ALSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVDKTFRAGSTI 60

Query: 589 AEANVIKETKQYTYKDGSQYVFMDLASYEESRLSEAEVGDKKKWLKEGMDCILLFWNGRV 410
            EANV KE KQ+TYKDG Q+VFMDL+++EE RL+EA+VGDK KWLKEGMDC LLFWNG+V
Sbjct: 61  EEANVFKEAKQFTYKDGVQFVFMDLSTFEEYRLNEADVGDKTKWLKEGMDCNLLFWNGKV 120

Query: 409 IDFELPITVKLTVVDVDPGVKGDTAQGGSKPATLDTGAVVNVPLFINTGEEILVDTRTGQ 230
           IDFELPITV+LTVVDVDPG+KGDTAQGG+KPATLDTGAVVNVPLF+N G EILVDTRTGQ
Sbjct: 121 IDFELPITVQLTVVDVDPGLKGDTAQGGTKPATLDTGAVVNVPLFVNIGAEILVDTRTGQ 180

Query: 229 YMSRA 215
           YMSRA
Sbjct: 181 YMSRA 185


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