BLASTX nr result

ID: Dioscorea21_contig00015069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015069
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001065693.1| Os11g0137000 [Oryza sativa Japonica Group] g...   138   4e-31
emb|CBX24397.1| hypothetical_protein [Oryza glaberrima]               138   5e-31
tpd|FAA00679.1| TPA: auxin efflux carrier [Oryza sativa Japonica...   138   5e-31
ref|XP_002282701.1| PREDICTED: probable auxin efflux carrier com...   138   5e-31
ref|XP_002282687.1| PREDICTED: probable auxin efflux carrier com...   138   5e-31

>ref|NP_001065693.1| Os11g0137000 [Oryza sativa Japonica Group]
           gi|85542141|sp|P0C0X5.1|PIN1B_ORYSJ RecName:
           Full=Probable auxin efflux carrier component 1b;
           AltName: Full=OsPIN1b gi|77548553|gb|ABA91350.1| Auxin
           Efflux Carrier family protein, expressed [Oryza sativa
           Japonica Group] gi|113644397|dbj|BAF27538.1|
           Os11g0137000 [Oryza sativa Japonica Group]
           gi|218185194|gb|EEC67621.1| hypothetical protein
           OsI_35007 [Oryza sativa Indica Group]
           gi|222615478|gb|EEE51610.1| hypothetical protein
           OsJ_32878 [Oryza sativa Japonica Group]
           gi|294831560|tpd|FAA00677.1| TPA: auxin efflux carrier
           [Oryza sativa Japonica Group]
          Length = 554

 Score =  138 bits (348), Expect = 4e-31
 Identities = 85/147 (57%), Positives = 96/147 (65%), Gaps = 20/147 (13%)
 Frame = +3

Query: 3   VWSSSASPVSENTTAG----VH---------------DVCNEFSFRNQ-ERDGGNGVKQG 122
           VWSSSASPVSE   A     VH                  +E+SF N+ E+DG    K G
Sbjct: 308 VWSSSASPVSERAAAAAAGAVHVFGGGGADHGDAKGAQAYDEYSFGNKNEKDGPTLSKLG 367

Query: 123 TDTIAEHNXXXXXXXXXXXXMLAASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVSFR 302
           +++ A+              M  ASVMTRLILIMVWRKLIRNPNTYSSL+G+IWSLVS+R
Sbjct: 368 SNSTAQLRPKDDGEGMAAA-MPPASVMTRLILIMVWRKLIRNPNTYSSLLGVIWSLVSYR 426

Query: 303 WGTEMPAIIARSISILSDAGLGMAMFS 383
           WG EMPAIIARSISILSDAGLGMAMFS
Sbjct: 427 WGIEMPAIIARSISILSDAGLGMAMFS 453


>emb|CBX24397.1| hypothetical_protein [Oryza glaberrima]
          Length = 556

 Score =  138 bits (347), Expect = 5e-31
 Identities = 85/148 (57%), Positives = 96/148 (64%), Gaps = 21/148 (14%)
 Frame = +3

Query: 3   VWSSSASPVSENTTAG-----VH---------------DVCNEFSFRNQ-ERDGGNGVKQ 119
           VWSSSASPVSE   A      VH                  +E+SF N+ E+DG    K 
Sbjct: 311 VWSSSASPVSERAAAAAAAGAVHVFGGGGADHGDAKGAQAYDEYSFGNKNEKDGPTLSKL 370

Query: 120 GTDTIAEHNXXXXXXXXXXXXMLAASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVSF 299
           G+++ A+              M  ASVMTRLILIMVWRKLIRNPNTYSSL+G+IWSLVS+
Sbjct: 371 GSNSTAQLRPKDDGEGRAAA-MPPASVMTRLILIMVWRKLIRNPNTYSSLLGVIWSLVSY 429

Query: 300 RWGTEMPAIIARSISILSDAGLGMAMFS 383
           RWG EMPAIIARSISILSDAGLGMAMFS
Sbjct: 430 RWGIEMPAIIARSISILSDAGLGMAMFS 457


>tpd|FAA00679.1| TPA: auxin efflux carrier [Oryza sativa Japonica Group]
          Length = 558

 Score =  138 bits (347), Expect = 5e-31
 Identities = 85/148 (57%), Positives = 96/148 (64%), Gaps = 21/148 (14%)
 Frame = +3

Query: 3   VWSSSASPVSENTTAG-----VH---------------DVCNEFSFRNQ-ERDGGNGVKQ 119
           VWSSSASPVSE   A      VH                  +E+SF N+ E+DG    K 
Sbjct: 311 VWSSSASPVSERAAAAAAAGAVHVFGGGGADHGDAKGAQAYDEYSFGNKNEKDGPTLSKL 370

Query: 120 GTDTIAEHNXXXXXXXXXXXXMLAASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVSF 299
           G+++ A+              M  ASVMTRLILIMVWRKLIRNPNTYSSL+G+IWSLVS+
Sbjct: 371 GSNSTAQLRPKDDGEGRAAA-MPPASVMTRLILIMVWRKLIRNPNTYSSLLGVIWSLVSY 429

Query: 300 RWGTEMPAIIARSISILSDAGLGMAMFS 383
           RWG EMPAIIARSISILSDAGLGMAMFS
Sbjct: 430 RWGIEMPAIIARSISILSDAGLGMAMFS 457


>ref|XP_002282701.1| PREDICTED: probable auxin efflux carrier component 1c-like isoform
           3 [Vitis vinifera]
          Length = 600

 Score =  138 bits (347), Expect = 5e-31
 Identities = 87/155 (56%), Positives = 96/155 (61%), Gaps = 28/155 (18%)
 Frame = +3

Query: 3   VWSSSASPVSEN--------------------TTAGVHDVCN--EFSFRNQ------ERD 98
           VWSSSASPVSE                      T G+H   +  EFSF N+      +R+
Sbjct: 346 VWSSSASPVSEGGIHVFRGGDYGNEVAGGVLPQTKGIHGFWSQDEFSFGNRPVANGGDRE 405

Query: 99  GGNGVKQGTDTIAEHNXXXXXXXXXXXXMLAASVMTRLILIMVWRKLIRNPNTYSSLIGL 278
           G    K G+ + AE N            M  ASVMTRLILIMVWRKLIRNPNTYSSLIGL
Sbjct: 406 GAMMSKLGSSSTAELNPKAAAQSKPTS-MPPASVMTRLILIMVWRKLIRNPNTYSSLIGL 464

Query: 279 IWSLVSFRWGTEMPAIIARSISILSDAGLGMAMFS 383
            WSLVSF+WG EMPAIIA+SISILSDAGLGMAMFS
Sbjct: 465 TWSLVSFKWGIEMPAIIAKSISILSDAGLGMAMFS 499


>ref|XP_002282687.1| PREDICTED: probable auxin efflux carrier component 1c-like isoform
           1 [Vitis vinifera]
          Length = 591

 Score =  138 bits (347), Expect = 5e-31
 Identities = 88/149 (59%), Positives = 96/149 (64%), Gaps = 22/149 (14%)
 Frame = +3

Query: 3   VWSSSASPVSENTTAGVH-----DVCNE-----------FSFRNQ------ERDGGNGVK 116
           VWSSSASPVSE    G+H     D  NE           FSF N+      +R+G    K
Sbjct: 346 VWSSSASPVSEG---GIHVFRGGDYGNEVADYDESRQDEFSFGNRPVANGGDREGAMMSK 402

Query: 117 QGTDTIAEHNXXXXXXXXXXXXMLAASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVS 296
            G+ + AE N            M  ASVMTRLILIMVWRKLIRNPNTYSSLIGL WSLVS
Sbjct: 403 LGSSSTAELNPKAAAQSKPTS-MPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVS 461

Query: 297 FRWGTEMPAIIARSISILSDAGLGMAMFS 383
           F+WG EMPAIIA+SISILSDAGLGMAMFS
Sbjct: 462 FKWGIEMPAIIAKSISILSDAGLGMAMFS 490


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