BLASTX nr result

ID: Dioscorea21_contig00015022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015022
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE15497.1| GA-stimulated transcript-like protein 1 [Gossypiu...   103   3e-20
ref|XP_002307722.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-20
ref|NP_192699.1| gibberellin-regulated protein 2 [Arabidopsis th...   102   5e-20
gb|ACC91329.1| antimicrobial peptide snakin [Capsicum annuum] gi...   102   5e-20
emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar]                 102   6e-20

>gb|AGE15497.1| GA-stimulated transcript-like protein 1 [Gossypium hirsutum]
          Length = 102

 Score =  103 bits (257), Expect = 3e-20
 Identities = 43/62 (69%), Positives = 49/62 (79%)
 Frame = +1

Query: 319 INCGEACKVRCSKSWKPKMCKRACGTCCARCNCVPPGTSVYTRGMCPCYAKMTTHGGRLK 498
           I+CG AC  RC  S +P +CKRACGTCCARCNCVPPGT+   + MCPCYA +TTHGGR K
Sbjct: 42  IDCGGACAARCRLSSRPHLCKRACGTCCARCNCVPPGTA-GNQEMCPCYASLTTHGGRRK 100

Query: 499 CP 504
           CP
Sbjct: 101 CP 102


>ref|XP_002307722.1| predicted protein [Populus trichocarpa] gi|222857171|gb|EEE94718.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  103 bits (257), Expect = 3e-20
 Identities = 46/66 (69%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
 Frame = +1

Query: 313 QTINCGEACKVRCSKSWKPKMCKRACGTCCARCNCVPPGTS--VYTRGMCPCYAKMTTHG 486
           + I+CG AC  RCS S +P++CKRACGTCCARC CVPPGTS   YT   CPCYA MTT G
Sbjct: 41  KNIDCGGACNARCSLSSRPRLCKRACGTCCARCKCVPPGTSGNHYT---CPCYATMTTRG 97

Query: 487 GRLKCP 504
           GRLKCP
Sbjct: 98  GRLKCP 103


>ref|NP_192699.1| gibberellin-regulated protein 2 [Arabidopsis thaliana]
           gi|1169838|sp|P46688.1|GASA2_ARATH RecName:
           Full=Gibberellin-regulated protein 2; AltName:
           Full=GAST1 protein homolog 2; Flags: Precursor
           gi|887937|gb|AAB06309.1| GAST1 protein homolog
           [Arabidopsis thaliana] gi|7267656|emb|CAB78084.1|
           gibberellin-regulated protein GASA2 precursor
           [Arabidopsis thaliana] gi|7321080|emb|CAB82128.1|
           gibberellin-regulated protein GASA2 precursor
           [Arabidopsis thaliana] gi|332657371|gb|AEE82771.1|
           gibberellin-regulated protein 2 [Arabidopsis thaliana]
          Length = 99

 Score =  102 bits (255), Expect = 5e-20
 Identities = 44/65 (67%), Positives = 51/65 (78%)
 Frame = +1

Query: 310 VQTINCGEACKVRCSKSWKPKMCKRACGTCCARCNCVPPGTSVYTRGMCPCYAKMTTHGG 489
           V  I+CG  CK RCSKS + K+C RAC +CC+RCNCVPPGTS  T  +CPCYA +TTHGG
Sbjct: 36  VVKIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTH-LCPCYASITTHGG 94

Query: 490 RLKCP 504
           RLKCP
Sbjct: 95  RLKCP 99


>gb|ACC91329.1| antimicrobial peptide snakin [Capsicum annuum]
           gi|221158268|gb|ACM07330.1| snakin [Capsicum annuum]
          Length = 104

 Score =  102 bits (255), Expect = 5e-20
 Identities = 43/62 (69%), Positives = 48/62 (77%)
 Frame = +1

Query: 319 INCGEACKVRCSKSWKPKMCKRACGTCCARCNCVPPGTSVYTRGMCPCYAKMTTHGGRLK 498
           I+CG  C  RC  S +P++CKRACGTCCARCNCVPPGTS  T+  CPCYA MTTHG R K
Sbjct: 44  IDCGGKCSARCRLSSRPRLCKRACGTCCARCNCVPPGTSGNTQ-TCPCYANMTTHGNRRK 102

Query: 499 CP 504
           CP
Sbjct: 103 CP 104


>emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar]
          Length = 101

 Score =  102 bits (254), Expect = 6e-20
 Identities = 43/62 (69%), Positives = 47/62 (75%)
 Frame = +1

Query: 319 INCGEACKVRCSKSWKPKMCKRACGTCCARCNCVPPGTSVYTRGMCPCYAKMTTHGGRLK 498
           INCG ACK RC  S +P +C RACGTCCARC CVPPGTS   + +CPCY  MTTHGGR K
Sbjct: 41  INCGAACKARCRLSSRPNLCHRACGTCCARCRCVPPGTS-GNQKVCPCYYNMTTHGGRRK 99

Query: 499 CP 504
           CP
Sbjct: 100 CP 101


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