BLASTX nr result
ID: Dioscorea21_contig00015011
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00015011
(1467 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin... 190 7e-46
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin... 190 7e-46
gb|AFK47668.1| unknown [Medicago truncatula] 177 8e-42
ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [... 177 8e-42
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin... 176 1e-41
>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 190 bits (483), Expect = 7e-46
Identities = 96/194 (49%), Positives = 120/194 (61%), Gaps = 4/194 (2%)
Frame = +3
Query: 3 KEEGGKKFRYPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKE 182
K++ +F+YPVRP CS+Y++TGTC+FGSNCK+NHP RR+ +Q KE
Sbjct: 117 KDDKSARFQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRK-----------NQVAKE 165
Query: 183 KEREIGKETLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQEMNEEGSV-ELNFLGLPVRP 359
K +E KE PE+ G +CKY+L GGCKFGK C++ H + V ELNFLGLP+R
Sbjct: 166 KVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRM 225
Query: 360 GARECSYYMRTGGCKYANNCKFHHPDPIAVGGREPRDHPSKY-NQGHTPV--VSQLPATS 530
G +EC YYMRTG CKY NC+F+HPDP A GG E PS Y N G P+ SQ S
Sbjct: 226 GEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYE---SPSGYGNGGSVPLQGASQSNMAS 282
Query: 531 WPMQIASNEPVTFL 572
W A NEP F+
Sbjct: 283 WSSPRALNEPAPFV 296
Score = 72.8 bits (177), Expect = 2e-10
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = +1
Query: 790 QQVYIDELPDRPGQPECQHFMKTGSCKFKSSCKFHHPKSRSVKASP 927
QQ I++ P+RPGQPEC +F+KTG CKF+++CK+HHPK+R K+ P
Sbjct: 352 QQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPP 397
Score = 69.7 bits (169), Expect = 2e-09
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +3
Query: 138 LTKDSLEANHQAVKEKEREIGKETLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQE-MNE 314
+ + +AN +++++ E PE+ G +C YFL G CKF CK+ H + + +
Sbjct: 335 INNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPK 394
Query: 315 EGSVELNFLGLPVRPGARECSYYMRTGGCKYANNCKFHHP 434
L+ GLP+RP C++Y R G CK+ CKF HP
Sbjct: 395 SPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHP 434
Score = 66.6 bits (161), Expect = 2e-08
Identities = 32/89 (35%), Positives = 45/89 (50%)
Frame = +3
Query: 30 YPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKEKEREIGKET 209
+P RPG+P CSY++KTG C+F + CKY+HP+ R K + +
Sbjct: 359 FPERPGQPECSYFLKTGDCKFRAACKYHHPKNR--------------IPKSPPCTLSDKG 404
Query: 210 LPEKAGYVKCKYFLMPGGCKFGKDCKFAH 296
LP + C ++ G CKFG CKF H
Sbjct: 405 LPLRPDQNICTHYNRYGICKFGPACKFDH 433
>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
protein product [Vitis vinifera]
Length = 484
Score = 190 bits (483), Expect = 7e-46
Identities = 96/194 (49%), Positives = 120/194 (61%), Gaps = 4/194 (2%)
Frame = +3
Query: 3 KEEGGKKFRYPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKE 182
K++ +F+YPVRP CS+Y++TGTC+FGSNCK+NHP RR+ +Q KE
Sbjct: 117 KDDKSARFQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRK-----------NQVAKE 165
Query: 183 KEREIGKETLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQEMNEEGSV-ELNFLGLPVRP 359
K +E KE PE+ G +CKY+L GGCKFGK C++ H + V ELNFLGLP+R
Sbjct: 166 KVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRM 225
Query: 360 GARECSYYMRTGGCKYANNCKFHHPDPIAVGGREPRDHPSKY-NQGHTPV--VSQLPATS 530
G +EC YYMRTG CKY NC+F+HPDP A GG E PS Y N G P+ SQ S
Sbjct: 226 GEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYE---SPSGYGNGGSVPLQGASQSNMAS 282
Query: 531 WPMQIASNEPVTFL 572
W A NEP F+
Sbjct: 283 WSSPRALNEPAPFV 296
Score = 72.8 bits (177), Expect = 2e-10
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = +1
Query: 790 QQVYIDELPDRPGQPECQHFMKTGSCKFKSSCKFHHPKSRSVKASP 927
QQ I++ P+RPGQPEC +F+KTG CKF+++CK+HHPK+R K+ P
Sbjct: 355 QQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPP 400
Score = 69.7 bits (169), Expect = 2e-09
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +3
Query: 138 LTKDSLEANHQAVKEKEREIGKETLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQE-MNE 314
+ + +AN +++++ E PE+ G +C YFL G CKF CK+ H + + +
Sbjct: 338 INNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPK 397
Query: 315 EGSVELNFLGLPVRPGARECSYYMRTGGCKYANNCKFHHP 434
L+ GLP+RP C++Y R G CK+ CKF HP
Sbjct: 398 SPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHP 437
Score = 66.6 bits (161), Expect = 2e-08
Identities = 32/89 (35%), Positives = 45/89 (50%)
Frame = +3
Query: 30 YPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKEKEREIGKET 209
+P RPG+P CSY++KTG C+F + CKY+HP+ R K + +
Sbjct: 362 FPERPGQPECSYFLKTGDCKFRAACKYHHPKNR--------------IPKSPPCTLSDKG 407
Query: 210 LPEKAGYVKCKYFLMPGGCKFGKDCKFAH 296
LP + C ++ G CKFG CKF H
Sbjct: 408 LPLRPDQNICTHYNRYGICKFGPACKFDH 436
>gb|AFK47668.1| unknown [Medicago truncatula]
Length = 455
Score = 177 bits (448), Expect = 8e-42
Identities = 87/186 (46%), Positives = 113/186 (60%)
Frame = +3
Query: 27 RYPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKEKEREIGKE 206
++P+RP CS+Y+KTG+C+FG NCK+NHP RR+ +QAV+EK RE +E
Sbjct: 230 QFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKN---------QNQAVREKVRE--RE 278
Query: 207 TLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQEMNEEGSVELNFLGLPVRPGARECSYYM 386
E AG +CKY+ GGCKFGK CK+ H + S ELNFLGLP+R G REC YYM
Sbjct: 279 EPEENAGQTECKYYQRSGGCKFGKACKYNHSRGFTAPIS-ELNFLGLPIRLGERECPYYM 337
Query: 387 RTGGCKYANNCKFHHPDPIAVGGREPRDHPSKYNQGHTPVVSQLPATSWPMQIASNEPVT 566
RTG CK+ +NC+F+HPDP VGG +P+ VSQ P SW + + P
Sbjct: 338 RTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSVSLRGVSQQPVASWSSRKLNETPFA 397
Query: 567 FLNPSP 584
L P+P
Sbjct: 398 PLMPTP 403
>ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355509959|gb|AES91101.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 573
Score = 177 bits (448), Expect = 8e-42
Identities = 87/186 (46%), Positives = 113/186 (60%)
Frame = +3
Query: 27 RYPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKEKEREIGKE 206
++P+RP CS+Y+KTG+C+FG NCK+NHP RR+ +QAV+EK RE +E
Sbjct: 230 QFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKN---------QNQAVREKVRE--RE 278
Query: 207 TLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQEMNEEGSVELNFLGLPVRPGARECSYYM 386
E AG +CKY+ GGCKFGK CK+ H + S ELNFLGLP+R G REC YYM
Sbjct: 279 EPEENAGQTECKYYQRSGGCKFGKACKYNHSRGFTAPIS-ELNFLGLPIRLGERECPYYM 337
Query: 387 RTGGCKYANNCKFHHPDPIAVGGREPRDHPSKYNQGHTPVVSQLPATSWPMQIASNEPVT 566
RTG CK+ +NC+F+HPDP VGG +P+ VSQ P SW + + P
Sbjct: 338 RTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSVSLRGVSQQPVASWSSRKLNETPFA 397
Query: 567 FLNPSP 584
L P+P
Sbjct: 398 PLMPTP 403
Score = 70.9 bits (172), Expect = 8e-10
Identities = 33/91 (36%), Positives = 47/91 (51%)
Frame = +3
Query: 30 YPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKEKEREIGKET 209
+P RPGEP CS++IKTG C+F SNCK++HP+ R K + +
Sbjct: 458 FPERPGEPECSFFIKTGDCKFKSNCKFHHPKNR--------------VAKLPPCNLSDKG 503
Query: 210 LPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQ 302
LP + C ++ G CKFG C+F H +
Sbjct: 504 LPLRPDQSVCSHYSRYGICKFGPACRFDHPE 534
Score = 69.7 bits (169), Expect = 2e-09
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 186 EREIGKETLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQE-MNEEGSVELNFLGLPVRPG 362
++++ E PE+ G +C +F+ G CKF +CKF H + + + L+ GLP+RP
Sbjct: 450 QKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPD 509
Query: 363 ARECSYYMRTGGCKYANNCKFHHPD 437
CS+Y R G CK+ C+F HP+
Sbjct: 510 QSVCSHYSRYGICKFGPACRFDHPE 534
Score = 69.3 bits (168), Expect = 2e-09
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 790 QQVYIDELPDRPGQPECQHFMKTGSCKFKSSCKFHHPKSRSVKASP 927
+Q+ + P+RPG+PEC F+KTG CKFKS+CKFHHPK+R K P
Sbjct: 451 KQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPP 496
>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 570
Score = 176 bits (447), Expect = 1e-41
Identities = 93/206 (45%), Positives = 121/206 (58%), Gaps = 8/206 (3%)
Frame = +3
Query: 3 KEEGGKKFRYPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKE 182
+ G+ +YP+RP C++Y+KTGTC+FG NCK+NHP RR+ +QA KE
Sbjct: 221 ERSSGRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRK-----------NQAKKE 269
Query: 183 KEREIGKETLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQEMNEEGSV-ELNFLGLPVRP 359
E +E E++G ++CKY+L GGCKFGK CKF H + + S ELNFLGLP+R
Sbjct: 270 NAGE--REEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRV 327
Query: 360 GARECSYYMRTGGCKYANNCKFHHPDPIAVGGREPRDHPSKYNQGHT---PVVSQLPATS 530
G +EC YYMRTG CK+ NC+F+HPDP VGG D PS Y G + VSQ +S
Sbjct: 328 GEKECLYYMRTGSCKFGANCRFNHPDPTTVGG---GDSPSGYGNGSSISLQGVSQSSISS 384
Query: 531 WPMQIASNEPVTF----LNPSPHFMP 596
W NE F L+P+P P
Sbjct: 385 WSSTRPLNESAPFVPVILSPNPGVSP 410
Score = 77.0 bits (188), Expect = 1e-11
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +3
Query: 138 LTKDSLEANHQAVKEKEREIGKETLPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQEMNEE 317
+ ++E+N +K+ + E PE+ G +C YFL G CKF +CKF H +
Sbjct: 437 MNNPAMESNVYMHHQKQMLV--EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIAR 494
Query: 318 GSV-ELNFLGLPVRPGARECSYYMRTGGCKYANNCKFHHPDPIAVGGRE 461
+ L+ GLP+RP C+YY R G CK+ CKF HP P + G +
Sbjct: 495 LPLCNLSDKGLPLRPDQNVCTYYRRYGICKFGPACKFDHPAPSTMAGHD 543
Score = 73.6 bits (179), Expect = 1e-10
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Frame = +3
Query: 30 YPVRPGEPACSYYIKTGTCRFGSNCKYNHPRRRRRTLTKDSLEANHQAVKEKEREIGKET 209
+P RPGEP CSY++KTG C+F SNCK++HP+ R L +L +
Sbjct: 459 FPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNL--------------SDKG 504
Query: 210 LPEKAGYVKCKYFLMPGGCKFGKDCKFAHDQEM----NEEGSVELNFLGLPV 353
LP + C Y+ G CKFG CKF H +++ S +N G+ V
Sbjct: 505 LPLRPDQNVCTYYRRYGICKFGPACKFDHPAPSTMAGHDQQSTYINSAGVDV 556
Score = 72.4 bits (176), Expect = 3e-10
Identities = 26/40 (65%), Positives = 36/40 (90%)
Frame = +1
Query: 790 QQVYIDELPDRPGQPECQHFMKTGSCKFKSSCKFHHPKSR 909
+Q+ ++E P+RPG+PEC +F+KTG CKFKS+CKFHHPK+R
Sbjct: 452 KQMLVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNR 491