BLASTX nr result

ID: Dioscorea21_contig00014950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014950
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629079.1| Structural maintenance of chromosomes protei...   207   7e-52
ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   206   1e-51
gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group...   206   1e-51
emb|CAD32690.1| SMC4 protein [Oryza sativa]                           206   1e-51
ref|XP_002534418.1| Structural maintenance of chromosome, putati...   205   3e-51

>ref|XP_003629079.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355523101|gb|AET03555.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 1252

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/119 (85%), Positives = 113/119 (94%)
 Frame = -3

Query: 357 LESAGVSVYFQEIIDKEDVTIESVEGSDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLK 178
           L+SAGVSV+FQEI+D ED T E+V G+DFVITRVAFRDNSSKYYIN+R SNFTEVTKKLK
Sbjct: 87  LDSAGVSVHFQEIVDLEDGTYETVPGTDFVITRVAFRDNSSKYYINNRSSNFTEVTKKLK 146

Query: 177 GKGVDLDNNWFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTDQYVEKIEEAYKQ 1
           GKGVDLDNN FLILQGEVEQISLMKPK+QGPHDEGFLEYLEDIIGT++YVEKI+E+YKQ
Sbjct: 147 GKGVDLDNNRFLILQGEVEQISLMKPKSQGPHDEGFLEYLEDIIGTNKYVEKIDESYKQ 205


>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Glycine max]
          Length = 1319

 Score =  206 bits (525), Expect = 1e-51
 Identities = 102/118 (86%), Positives = 112/118 (94%)
 Frame = -3

Query: 357 LESAGVSVYFQEIIDKEDVTIESVEGSDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLK 178
           L+SAGVSV+FQEI+D +D T E+V GSDFVITRVAFRDNSSKYYINDR SNFTEVTKKLK
Sbjct: 173 LDSAGVSVHFQEIVDSDDGTYEAVAGSDFVITRVAFRDNSSKYYINDRTSNFTEVTKKLK 232

Query: 177 GKGVDLDNNWFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTDQYVEKIEEAYK 4
           GKGVDLDNN FLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGT++YVEKI+E++K
Sbjct: 233 GKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTNKYVEKIDESHK 290


>gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group]
           gi|218197032|gb|EEC79459.1| hypothetical protein
           OsI_20467 [Oryza sativa Indica Group]
           gi|222632094|gb|EEE64226.1| hypothetical protein
           OsJ_19059 [Oryza sativa Japonica Group]
          Length = 1241

 Score =  206 bits (525), Expect = 1e-51
 Identities = 103/119 (86%), Positives = 111/119 (93%)
 Frame = -3

Query: 357 LESAGVSVYFQEIIDKEDVTIESVEGSDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLK 178
           L+SAGVSV+FQEIID +D    +VEGSDF+ITRVAFRDN+SKYYINDRGSNFTEVTK LK
Sbjct: 94  LDSAGVSVHFQEIIDLDDGNYRAVEGSDFIITRVAFRDNTSKYYINDRGSNFTEVTKLLK 153

Query: 177 GKGVDLDNNWFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTDQYVEKIEEAYKQ 1
           GKGVDLDNN FLILQGEVEQISLMKPK+QGPHDEGFLEYLEDIIGT+QYVEKIEEA KQ
Sbjct: 154 GKGVDLDNNRFLILQGEVEQISLMKPKSQGPHDEGFLEYLEDIIGTNQYVEKIEEASKQ 212


>emb|CAD32690.1| SMC4 protein [Oryza sativa]
          Length = 1236

 Score =  206 bits (525), Expect = 1e-51
 Identities = 103/119 (86%), Positives = 111/119 (93%)
 Frame = -3

Query: 357 LESAGVSVYFQEIIDKEDVTIESVEGSDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLK 178
           L+SAGVSV+FQEIID +D    +VEGSDF+ITRVAFRDN+SKYYINDRGSNFTEVTK LK
Sbjct: 94  LDSAGVSVHFQEIIDLDDGNYRAVEGSDFIITRVAFRDNTSKYYINDRGSNFTEVTKLLK 153

Query: 177 GKGVDLDNNWFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTDQYVEKIEEAYKQ 1
           GKGVDLDNN FLILQGEVEQISLMKPK+QGPHDEGFLEYLEDIIGT+QYVEKIEEA KQ
Sbjct: 154 GKGVDLDNNRFLILQGEVEQISLMKPKSQGPHDEGFLEYLEDIIGTNQYVEKIEEASKQ 212


>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
           gi|223525329|gb|EEF27966.1| Structural maintenance of
           chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  205 bits (522), Expect = 3e-51
 Identities = 104/119 (87%), Positives = 110/119 (92%)
 Frame = -3

Query: 357 LESAGVSVYFQEIIDKEDVTIESVEGSDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLK 178
           L+SAGVSV+FQEIID +D   E V  SDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLK
Sbjct: 99  LDSAGVSVHFQEIIDLDDGNYEVVPRSDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLK 158

Query: 177 GKGVDLDNNWFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTDQYVEKIEEAYKQ 1
           GKGVDLDNN FLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTD+YVEKIEE+ K+
Sbjct: 159 GKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTDKYVEKIEESSKE 217


Top