BLASTX nr result

ID: Dioscorea21_contig00014937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014937
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002453962.1| hypothetical protein SORBIDRAFT_04g022280 [S...   273   3e-71
dbj|BAJ97989.1| predicted protein [Hordeum vulgare subsp. vulgare]    265   1e-68
ref|XP_003575105.1| PREDICTED: U-box domain-containing protein 2...   259   7e-67
ref|NP_001148065.1| ubiquitin-protein ligase [Zea mays] gi|19561...   259   7e-67
gb|AFW71736.1| ubiquitin-protein ligase [Zea mays]                    258   1e-66

>ref|XP_002453962.1| hypothetical protein SORBIDRAFT_04g022280 [Sorghum bicolor]
           gi|241933793|gb|EES06938.1| hypothetical protein
           SORBIDRAFT_04g022280 [Sorghum bicolor]
          Length = 407

 Score =  273 bits (699), Expect = 3e-71
 Identities = 152/264 (57%), Positives = 174/264 (65%), Gaps = 5/264 (1%)
 Frame = -1

Query: 777 LDVAGVQIPYHFRCPISLELMRDPVTVSTGQTYDRPSIESWVATGNTTCPVTRSPLTEFT 598
           LD AGVQ+P++FRCPISLELMRDPVTVSTGQTYDR SIESWVATGNTTCPVTR+PL +FT
Sbjct: 11  LDTAGVQVPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRAPLADFT 70

Query: 597 LIPNHTLRRLIQDWCVAHRSQGVERIPTPKQPADPSLVRHLVAQAVDSGLEVEIRIGVLR 418
           LIPNHTLRRLIQ+WCVAHRS GVERIPTPKQPADP LVR LVAQ           +  LR
Sbjct: 71  LIPNHTLRRLIQEWCVAHRSMGVERIPTPKQPADPDLVRSLVAQGPG--------LPALR 122

Query: 417 KMRALARESEKNRVVMGTHETRSALIELAFGDGDADLEVEAIGVLA----GFAMTXXXXX 250
           ++RALARES+KNR+VM THETR+AL+E AFG G  +++ EA+ VLA    G A       
Sbjct: 123 RLRALARESDKNRLVMATHETRAALVEAAFGSGAEEVQAEAMAVLALVGLGEAEAAAVVG 182

Query: 249 XXXXXXXXXXRLARWV-AEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMEGIVGLVK 73
                      LA  V                                  VM+G+V LV+
Sbjct: 183 REERVARLGKVLAAGVGVPLEARVNAGAVAEAAASASGAEARAVLGAAEGVMDGLVALVE 242

Query: 72  QKGNTRGVMVGIRALFALCLAREN 1
           +K N R V VGIRALFALCLA+EN
Sbjct: 243 EKANARAVRVGIRALFALCLAKEN 266


>dbj|BAJ97989.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 407

 Score =  265 bits (677), Expect = 1e-68
 Identities = 144/263 (54%), Positives = 172/263 (65%), Gaps = 4/263 (1%)
 Frame = -1

Query: 777 LDVAGVQIPYHFRCPISLELMRDPVTVSTGQTYDRPSIESWVATGNTTCPVTRSPLTEFT 598
           LD  G+Q+P++FRCPISLELM+DPVTV+TGQTYDR SIESWVATGNTTCPVTR+PL +FT
Sbjct: 11  LDTVGLQVPWYFRCPISLELMQDPVTVATGQTYDRASIESWVATGNTTCPVTRAPLADFT 70

Query: 597 LIPNHTLRRLIQDWCVAHRSQGVERIPTPKQPADPSLVRHLVAQAVDSGLEVEIRIGVLR 418
           LIPNHTLRRLIQ+WCVAHRS GVERIPTPKQPADP L+R L+AQ           + VL+
Sbjct: 71  LIPNHTLRRLIQEWCVAHRSLGVERIPTPKQPADPDLIRSLIAQGPG--------LPVLK 122

Query: 417 KMRALARESEKNRVVMGTHETRSALIELAFGDGDADLEVEAIGVLAGFAMTXXXXXXXXX 238
           K+RALARES+KNR+VM THETR+AL+E+AFG    + + EA+ VLA   M          
Sbjct: 123 KLRALARESDKNRLVMATHETRAALVEMAFGGSAEEAQAEAMAVLALVGMGEAEAVDVVG 182

Query: 237 XXXXXXRLARWVAE----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMEGIVGLVKQ 70
                 RLA+ +                                     V+EG+V LV +
Sbjct: 183 REDRVTRLAKVLGSQGTTLEAKVNAGAVVEAAAAVSGAEARVVLGAADGVIEGLVALVDE 242

Query: 69  KGNTRGVMVGIRALFALCLAREN 1
           K N R V VGIR LFALCLA+EN
Sbjct: 243 KANARAVRVGIRGLFALCLAKEN 265


>ref|XP_003575105.1| PREDICTED: U-box domain-containing protein 25-like [Brachypodium
           distachyon]
          Length = 412

 Score =  259 bits (661), Expect = 7e-67
 Identities = 145/268 (54%), Positives = 173/268 (64%), Gaps = 9/268 (3%)
 Frame = -1

Query: 777 LDVAGVQIPYHFRCPISLELMRDPVTVSTGQTYDRPSIESWVATGNTTCPVTRSPLTEFT 598
           LD  G+Q+P++FRCPISLELM+DPVTV+TGQTYDR SIESWVATGNTTCPVTR+PL +FT
Sbjct: 11  LDTVGLQVPWYFRCPISLELMQDPVTVATGQTYDRASIESWVATGNTTCPVTRAPLADFT 70

Query: 597 LIPNHTLRRLIQDWCVAHRSQGVERIPTPKQPADPSLVRHLVAQAVDSGLEVEIRIGVLR 418
           LIPNHTLRRLIQ+WCVAHRS GVERIPTPKQPADP L+R L+AQ           +  LR
Sbjct: 71  LIPNHTLRRLIQEWCVAHRSLGVERIPTPKQPADPDLIRSLIAQCPG--------LPALR 122

Query: 417 KMRALARESEKNRVVMGTHETRSALIELAF--GDGDADLEVEAIGVLAGFAMTXXXXXXX 244
           K+RALARES+KNR+VM THETR+AL+E+AF  G G  + + EA+ VL+   M        
Sbjct: 123 KLRALARESDKNRLVMATHETRAALVEMAFGAGGGGEEAQAEAMAVLSLIGMGEAEAVEV 182

Query: 243 XXXXXXXXRL------ARWVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMEGIVG 82
                   RL      ++ +                                 VMEG+V 
Sbjct: 183 VGREERVARLGKLLGSSQGIMTLEARVNAGAVVEAAAAVSGAEARVVLGVAEGVMEGLVA 242

Query: 81  LVKQKG-NTRGVMVGIRALFALCLAREN 1
           LV +KG N R V VGIR LFALCLA+EN
Sbjct: 243 LVDEKGNNARAVRVGIRGLFALCLAKEN 270


>ref|NP_001148065.1| ubiquitin-protein ligase [Zea mays] gi|195615592|gb|ACG29626.1|
           ubiquitin-protein ligase [Zea mays]
          Length = 416

 Score =  259 bits (661), Expect = 7e-67
 Identities = 147/268 (54%), Positives = 172/268 (64%), Gaps = 9/268 (3%)
 Frame = -1

Query: 777 LDVAGVQIPYHFRCPISLELMRDPVTVSTGQTYDRPSIESWVATGNTTCPVTRSPLTEFT 598
           LD AGVQ+P++FRCPISLELMRDPVTVSTGQTYDR SIESWVATGNTTCPVTR+ L +FT
Sbjct: 11  LDTAGVQVPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRAALADFT 70

Query: 597 LIPNHTLRRLIQDWCVAHRSQGVERIPTPKQPADPSLVRHLVAQAVDSGLEVEIRIGVLR 418
           LIPNHTLRRLIQ+WCVAHRS GVERIPTPKQPADP LVR LVAQ           +  LR
Sbjct: 71  LIPNHTLRRLIQEWCVAHRSMGVERIPTPKQPADPDLVRSLVAQGPG--------LPALR 122

Query: 417 KMRALARESEKNRVVMGTHETRSALIELAFGDGDA----DLEVEAIGVLAGFAMTXXXXX 250
           ++RALARES+KNR+VM THETR+AL+E AFG G      +LE EA+ VLA   +      
Sbjct: 123 RLRALARESDKNRLVMATHETRAALVEAAFGSGSGAASEELEAEAMAVLALVGLGEAEAA 182

Query: 249 XXXXXXXXXXRLARWV---AEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMEGIVGL 79
                     RL + +                                    VM+G+V L
Sbjct: 183 EVVGREERVARLGKVLGGGGPLEARVNAGAVVEAVASASGAEARAALGGAEGVMDGLVAL 242

Query: 78  VKQK--GNTRGVMVGIRALFALCLAREN 1
            +++   N R V VG+RALFALCLA+EN
Sbjct: 243 AEEEKANNARAVRVGVRALFALCLAKEN 270


>gb|AFW71736.1| ubiquitin-protein ligase [Zea mays]
          Length = 418

 Score =  258 bits (659), Expect = 1e-66
 Identities = 147/270 (54%), Positives = 172/270 (63%), Gaps = 11/270 (4%)
 Frame = -1

Query: 777 LDVAGVQIPYHFRCPISLELMRDPVTVSTGQTYDRPSIESWVATGNTTCPVTRSPLTEFT 598
           LD AGVQ+P++FRCPISLELMRDPVTVSTGQTYDR SIESWVATGNTTCPVTR+ L +FT
Sbjct: 11  LDTAGVQVPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRTALADFT 70

Query: 597 LIPNHTLRRLIQDWCVAHRSQGVERIPTPKQPADPSLVRHLVAQAVDSGLEVEIRIGVLR 418
           LIPNHTLRRLIQ+WCVAHRS GVERIPTPKQPADP LVR LVAQ           +  LR
Sbjct: 71  LIPNHTLRRLIQEWCVAHRSMGVERIPTPKQPADPDLVRSLVAQGPG--------LPALR 122

Query: 417 KMRALARESEKNRVVMGTHETRSALIELAFGDGDA------DLEVEAIGVLAGFAMTXXX 256
           ++RALARES+KNR+VM THETR+AL+E AFG G        +LE EA+ VLA   +    
Sbjct: 123 RLRALARESDKNRLVMATHETRAALVEAAFGSGSGSGAASEELETEAMAVLALVGLGEAE 182

Query: 255 XXXXXXXXXXXXRLARWV---AEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMEGIV 85
                       RL + +                                    VM+G+V
Sbjct: 183 AAEVVGREERVARLGKVLGGGGPLEARVNAGAVVEAVASASGAEARAALGGAEGVMDGLV 242

Query: 84  GLVKQK--GNTRGVMVGIRALFALCLAREN 1
            L +++   N R V VG+RALFALCLA+EN
Sbjct: 243 ALAEEEKANNARAVRVGVRALFALCLAKEN 272


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