BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014936
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513029.1| protein with unknown function [Ricinus commu...    65   4e-09
ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatu...    62   4e-08
ref|XP_002322621.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, c...    62   5e-08

>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/54 (64%), Positives = 40/54 (74%)
 Frame = +3

Query: 15  MDKLSVNQKRGAKQAKSKRKAPLKVVYISSPMKFETSAAKFRELVQSVTGQDSD 176
           MD L VN K   KQA  + K  +KVVYISSPMK ETSA+KFR LVQ +TG+DSD
Sbjct: 1   MDVLGVNMK-SRKQASKRSKKGIKVVYISSPMKVETSASKFRALVQELTGKDSD 53


>ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/70 (44%), Positives = 46/70 (65%)
 Frame = +3

Query: 15  MDKLSVNQKRGAKQAKSKRKAPLKVVYISSPMKFETSAAKFRELVQSVTGQDSDIDSMLG 194
           MD L  N K G +    + K  +KVVYISSPMK +TSA+KFR LVQ +TG+DSD +  + 
Sbjct: 1   MDVLGANMKSGKRSHTKRGKKAIKVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMD 60

Query: 195 FHESITTVDV 224
            + +  ++++
Sbjct: 61  INGARDSLEI 70


>dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatus subsp. vulgaris]
          Length = 146

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/56 (53%), Positives = 41/56 (73%)
 Frame = +3

Query: 24  LSVNQKRGAKQAKSKRKAPLKVVYISSPMKFETSAAKFRELVQSVTGQDSDIDSML 191
           ++V  K+ AK+++    A  KVVYISSPMK +TSA+KFR LVQ +TGQDSD +  +
Sbjct: 1   MNVTGKKQAKRSRKSAAADFKVVYISSPMKVKTSASKFRSLVQRLTGQDSDAERFM 56


>ref|XP_002322621.1| predicted protein [Populus trichocarpa] gi|222867251|gb|EEF04382.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/50 (60%), Positives = 42/50 (84%)
 Frame = +3

Query: 30  VNQKRGAKQAKSKRKAPLKVVYISSPMKFETSAAKFRELVQSVTGQDSDI 179
           V +++G K AK+K+K P+KVVYIS+PMKF+ SA+ FR LVQ +TGQDS++
Sbjct: 13  VQERKGTKIAKTKKK-PMKVVYISNPMKFKISASGFRALVQELTGQDSEL 61


>ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Cucumis sativus] gi|449487122|ref|XP_004157503.1|
           PREDICTED: sigma factor binding protein 1,
           chloroplastic-like [Cucumis sativus]
          Length = 140

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +3

Query: 30  VNQKRGAKQAKSKRKAPLKVVYISSPMKFETSAAKFRELVQSVTGQDSDIDSML 191
           V  K+ AK++K    A  KVVYISSPMK +TSA+KFR LVQ +TGQDSD +  +
Sbjct: 3   VTGKKQAKRSKKSAGAGFKVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFM 56