BLASTX nr result

ID: Dioscorea21_contig00014918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014918
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057601.1| Os06g0358800 [Oryza sativa Japonica Group] g...   271   9e-71
gb|EAZ00889.1| hypothetical protein OsI_22916 [Oryza sativa Indi...   270   3e-70
ref|XP_003560753.1| PREDICTED: ribonuclease 3-like protein 3-lik...   261   9e-68
gb|ACG34313.1| endoribonuclease Dicer [Zea mays]                      261   2e-67
ref|XP_002444209.1| hypothetical protein SORBIDRAFT_07g015020 [S...   260   3e-67

>ref|NP_001057601.1| Os06g0358800 [Oryza sativa Japonica Group]
           gi|75254269|sp|Q69KJ0.1|RTL3_ORYSJ RecName:
           Full=Ribonuclease 3-like protein 3; AltName:
           Full=Ribonuclease III-like protein 3; Short=RNase
           III-like protein 3 gi|51091751|dbj|BAD36550.1| CAF
           protein-like [Oryza sativa Japonica Group]
           gi|113595641|dbj|BAF19515.1| Os06g0358800 [Oryza sativa
           Japonica Group] gi|125597181|gb|EAZ36961.1| hypothetical
           protein OsJ_21299 [Oryza sativa Japonica Group]
          Length = 299

 Score =  271 bits (694), Expect = 9e-71
 Identities = 133/223 (59%), Positives = 172/223 (77%), Gaps = 2/223 (0%)
 Frame = -3

Query: 794 KSAITYERLEFIGDAVLNCLVAREVFVSYPDFAPGLLTRLRAANVDTEKLARVAVSHELY 615
           +  +TYERLE++GDAVL C+V+REVF++Y    PG LTRLRAANVD EKLARVAV H L+
Sbjct: 70  RPGVTYERLEYLGDAVLTCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLH 129

Query: 614 RFIRHKAPQLDKQIQEFRESLLDYPIHSNGLLDPPKALADVVESLLGAVFVDSNSSLETV 435
            F+RHKAP LD QI +F E L  YPIHSNGLLDPPK L DVVESL+GA++ DSN + E V
Sbjct: 130 HFLRHKAPNLDGQITDFIEELSMYPIHSNGLLDPPKVLCDVVESLIGAIYCDSNFNQEIV 189

Query: 434 WEVYRRLAEPLINPKTLGKHPVSELHELCQKNRMEVRFLREKWDESTCIDVMVDGNMVGS 255
           W+V+++LA+PLI+ +TLGKHPVSEL E CQK R  V+ ++++WD++  ++V++DG MVG 
Sbjct: 190 WQVFQKLADPLISLETLGKHPVSELFEFCQKTRRGVKIVKDEWDKNLTVEVLIDGEMVGR 249

Query: 254 ATYGNKKEIALNRAAKAAVDCLKNML--ANENPLSLTQTDLFS 132
           ATY  KKEIA NRAAKAA+D LK  L  +   P+S   ++ F+
Sbjct: 250 ATYAQKKEIAQNRAAKAALDKLKETLGQSQTEPMSAEVSEQFN 292


>gb|EAZ00889.1| hypothetical protein OsI_22916 [Oryza sativa Indica Group]
          Length = 276

 Score =  270 bits (690), Expect = 3e-70
 Identities = 130/206 (63%), Positives = 164/206 (79%)
 Frame = -3

Query: 794 KSAITYERLEFIGDAVLNCLVAREVFVSYPDFAPGLLTRLRAANVDTEKLARVAVSHELY 615
           +  +TYERLE++GDAVL C+V+REVF++Y    PG LTRLRAANVD EKLARVAV H L+
Sbjct: 70  RPGVTYERLEYLGDAVLTCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLH 129

Query: 614 RFIRHKAPQLDKQIQEFRESLLDYPIHSNGLLDPPKALADVVESLLGAVFVDSNSSLETV 435
            F+RHKAP LD QI +F E L  YPIHSNGLLDPPK L DVVESL+GA++ DSN + E V
Sbjct: 130 HFLRHKAPNLDGQITDFIEELSMYPIHSNGLLDPPKVLCDVVESLIGAIYCDSNFNQEIV 189

Query: 434 WEVYRRLAEPLINPKTLGKHPVSELHELCQKNRMEVRFLREKWDESTCIDVMVDGNMVGS 255
           W+V+++LA+PLI+ +TLGKHPVSEL E CQK R  V+ ++++WD++  ++V++DG MVG 
Sbjct: 190 WQVFQKLADPLISLETLGKHPVSELFEFCQKTRRGVKIVKDEWDKNLTVEVLIDGEMVGR 249

Query: 254 ATYGNKKEIALNRAAKAAVDCLKNML 177
           ATY  KKEIA NRAAKAA+D LK  L
Sbjct: 250 ATYAQKKEIAQNRAAKAALDKLKETL 275


>ref|XP_003560753.1| PREDICTED: ribonuclease 3-like protein 3-like [Brachypodium
           distachyon]
          Length = 296

 Score =  261 bits (668), Expect = 9e-68
 Identities = 126/202 (62%), Positives = 160/202 (79%)
 Frame = -3

Query: 782 TYERLEFIGDAVLNCLVAREVFVSYPDFAPGLLTRLRAANVDTEKLARVAVSHELYRFIR 603
           TYERLE++GD VL CL++REVF++Y    PG LTRLRAANVD EKLARVAV H ++RF+R
Sbjct: 74  TYERLEYLGDGVLTCLMSREVFLTYRSLPPGPLTRLRAANVDKEKLARVAVEHGIHRFLR 133

Query: 602 HKAPQLDKQIQEFRESLLDYPIHSNGLLDPPKALADVVESLLGAVFVDSNSSLETVWEVY 423
           HKAPQLD QI +F + L  Y  HSNGLLD PK L+D+VESL+GA+++DSN + E VW V+
Sbjct: 134 HKAPQLDGQIDDFIKELCKYKYHSNGLLDAPKVLSDIVESLIGAIYLDSNFNQEVVWRVF 193

Query: 422 RRLAEPLINPKTLGKHPVSELHELCQKNRMEVRFLREKWDESTCIDVMVDGNMVGSATYG 243
           R LA+PLI+ +TLGKHPVSEL E CQK R  ++F+++ WD+   +DV+VDG ++G+ATY 
Sbjct: 194 RNLADPLISLETLGKHPVSELLEFCQKTRRGLQFVKDGWDKHLKVDVLVDGELLGTATYA 253

Query: 242 NKKEIALNRAAKAAVDCLKNML 177
            KKEIA NRAAKAA+D LK  L
Sbjct: 254 QKKEIAQNRAAKAALDKLKETL 275


>gb|ACG34313.1| endoribonuclease Dicer [Zea mays]
          Length = 329

 Score =  261 bits (666), Expect = 2e-67
 Identities = 128/200 (64%), Positives = 156/200 (78%)
 Frame = -3

Query: 782 TYERLEFIGDAVLNCLVAREVFVSYPDFAPGLLTRLRAANVDTEKLARVAVSHELYRFIR 603
           TYERLE++GD VL CL++REVF +Y    PG LTRLRAANVDTEKLARVAV   LYRF+R
Sbjct: 83  TYERLEYLGDGVLTCLMSREVFRTYRTLQPGPLTRLRAANVDTEKLARVAVHRGLYRFLR 142

Query: 602 HKAPQLDKQIQEFRESLLDYPIHSNGLLDPPKALADVVESLLGAVFVDSNSSLETVWEVY 423
           HKAP+L  QI  F E +  YP+HSNGLLDPPK L D+VESL+GA+++DSN   E VW V+
Sbjct: 143 HKAPKLQDQICFFIEEMRKYPVHSNGLLDPPKVLCDIVESLIGAIYLDSNFDQEEVWRVF 202

Query: 422 RRLAEPLINPKTLGKHPVSELHELCQKNRMEVRFLREKWDESTCIDVMVDGNMVGSATYG 243
           R LA+PLI  +TLGKHPVSEL E CQK    V+FL+++WD+S  + V++DG +VGSA YG
Sbjct: 203 RTLADPLIGLETLGKHPVSELFEFCQKTHRGVKFLKDEWDKSLKVQVLIDGEVVGSAIYG 262

Query: 242 NKKEIALNRAAKAAVDCLKN 183
            KKEIA NRAAK A+D LK+
Sbjct: 263 PKKEIAQNRAAKDALDKLKD 282


>ref|XP_002444209.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
           gi|241940559|gb|EES13704.1| hypothetical protein
           SORBIDRAFT_07g015020 [Sorghum bicolor]
          Length = 291

 Score =  260 bits (664), Expect = 3e-67
 Identities = 127/202 (62%), Positives = 159/202 (78%)
 Frame = -3

Query: 782 TYERLEFIGDAVLNCLVAREVFVSYPDFAPGLLTRLRAANVDTEKLARVAVSHELYRFIR 603
           TYERLE++GD VL CL++REVF +Y    PG LTRLRAANVDTEKLARVAV   L+RF+R
Sbjct: 62  TYERLEYLGDGVLTCLMSREVFRNYRTLPPGPLTRLRAANVDTEKLARVAVDRGLHRFLR 121

Query: 602 HKAPQLDKQIQEFRESLLDYPIHSNGLLDPPKALADVVESLLGAVFVDSNSSLETVWEVY 423
           HKAP+L  QI  F E +  YP+HSNGLLDPPK L D+VESL+GA++ DS+ + E VW V+
Sbjct: 122 HKAPKLQDQICLFIEEMRKYPVHSNGLLDPPKVLCDIVESLIGAIYWDSDFNQEEVWRVF 181

Query: 422 RRLAEPLINPKTLGKHPVSELHELCQKNRMEVRFLREKWDESTCIDVMVDGNMVGSATYG 243
           R LA+PLI  +TLGKHPV+EL E CQK R  V+F++++WD+S  ++V++DG +V SATYG
Sbjct: 182 RTLADPLIGLETLGKHPVTELFEFCQKTRRGVKFVKDEWDKSLKVEVLIDGELVASATYG 241

Query: 242 NKKEIALNRAAKAAVDCLKNML 177
            KKEIA NRAAKAA+D LK  L
Sbjct: 242 PKKEIAQNRAAKAALDKLKETL 263


Top