BLASTX nr result

ID: Dioscorea21_contig00014884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014884
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269135.1| PREDICTED: uncharacterized protein LOC100244...    72   4e-11
emb|CAN62024.1| hypothetical protein VITISV_004927 [Vitis vinifera]    69   4e-10
ref|XP_002310994.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002316486.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002446442.1| hypothetical protein SORBIDRAFT_06g016120 [S...    57   1e-06

>ref|XP_002269135.1| PREDICTED: uncharacterized protein LOC100244711 [Vitis vinifera]
           gi|296084462|emb|CBI25021.3| unnamed protein product
           [Vitis vinifera]
          Length = 226

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/73 (57%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
 Frame = -3

Query: 206 WPWASCKHPKTSSFRGGKGHDDTMFKTVNSVYFDYSN-----ESCFTNTSEDLLSESFST 42
           W W SCKHPKT SFR G    D MFKTVNSV+FD ++     ES FTNTSE   S SFST
Sbjct: 20  WQWPSCKHPKTLSFRAG----DDMFKTVNSVFFDPTDGVETPESWFTNTSE---SASFST 72

Query: 41  VSEDSNGDSSLEM 3
            SE+  G  S+E+
Sbjct: 73  ESEEEYGVKSVEV 85


>emb|CAN62024.1| hypothetical protein VITISV_004927 [Vitis vinifera]
          Length = 226

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
 Frame = -3

Query: 206 WPWASCKHPKTSSFRGGKGHDDTMFKTVNSVYFDYSN-----ESCFTNTSEDLLSESFST 42
           W W SCK PKT SFR G    D MFKTVNSV+FD ++     ES FTNTSE   S SFST
Sbjct: 20  WQWPSCKXPKTLSFRAG----DDMFKTVNSVFFDPTDGVETPESWFTNTSE---SASFST 72

Query: 41  VSEDSNGDSSLEM 3
            SE+  G  S+E+
Sbjct: 73  ESEEEYGVKSVEV 85


>ref|XP_002310994.1| predicted protein [Populus trichocarpa] gi|222850814|gb|EEE88361.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/67 (56%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
 Frame = -3

Query: 200 WASCKHPKTSSFRGGKGHDDTMFKTVNSVYFDYSN-----ESCFTNTSEDLLSESFSTVS 36
           W SCKHPKT SFRGG    D + KTVNSV+FD S      ES FTN+SE   + SFST S
Sbjct: 19  WPSCKHPKTLSFRGG----DDVIKTVNSVFFDPSERVETPESWFTNSSE---TTSFSTES 71

Query: 35  EDSNGDS 15
           E  +G+S
Sbjct: 72  EGFDGES 78


>ref|XP_002316486.1| predicted protein [Populus trichocarpa] gi|222865526|gb|EEF02657.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
 Frame = -3

Query: 200 WASCKHPKTSSFRGGKGHDDTMFKTVNSVYFDYSN-----ESCFTNTSEDLLSESFSTVS 36
           W SCKHPKT SFR G    D + KTVNSV+FD S      ES FT++SE   + SFST S
Sbjct: 19  WPSCKHPKTLSFRAG----DDVIKTVNSVFFDPSEGVETPESWFTDSSE---TTSFSTES 71

Query: 35  EDSNGDS 15
           ED +G+S
Sbjct: 72  EDYDGES 78


>ref|XP_002446442.1| hypothetical protein SORBIDRAFT_06g016120 [Sorghum bicolor]
           gi|241937625|gb|EES10770.1| hypothetical protein
           SORBIDRAFT_06g016120 [Sorghum bicolor]
          Length = 330

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
 Frame = -3

Query: 206 WPWASCKHPKTSSFRGGKGHDDTMFKTVNSVYFDYSNE-----------SCFTNTSEDLL 60
           WPW SC+HP+TSSFRG K  D  +F+T+NSVY   S +           +C   +   LL
Sbjct: 72  WPWPSCRHPRTSSFRGPKDDDAAVFRTLNSVYDTTSEQFLRRSSSIDVAACVDRSPLSLL 131

Query: 59  SESFSTVSEDSNGDSSLEM 3
            E+ +   +    D   E+
Sbjct: 132 GEAVAVAEQVDEEDKETEL 150


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