BLASTX nr result

ID: Dioscorea21_contig00014879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014879
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...   383   e-104
emb|CBI26833.3| unnamed protein product [Vitis vinifera]              383   e-104
ref|XP_002526002.1| protein with unknown function [Ricinus commu...   373   e-101
ref|XP_003558458.1| PREDICTED: nuclear pore complex protein Nup1...   360   2e-97
ref|XP_003558457.1| PREDICTED: nuclear pore complex protein Nup1...   360   2e-97

>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis vinifera]
          Length = 1496

 Score =  383 bits (984), Expect = e-104
 Identities = 195/267 (73%), Positives = 216/267 (80%)
 Frame = +2

Query: 5    TESLQNNSFPHSNLMADANFAIAAREKAKELSLELKSITQLYNEYAVPFRLWEICLEMLN 184
            +ES+ N S   SNL AD NFA   +EKA+E+SL+LKSITQLYNEYAVPF LWEICLEML 
Sbjct: 1223 SESVLNESCSESNLNADTNFANTVQEKAREISLDLKSITQLYNEYAVPFELWEICLEMLY 1282

Query: 185  FANYSGDADSKIVRETWARLLDQALSKGGVAEACSVLKRVGSNLYPGDGACLPLDTLCLH 364
            FANYSGDADS IVRETWARL+DQALSKGG+AEACSVLKRVGS++YPGDGA LPLDTLCLH
Sbjct: 1283 FANYSGDADSSIVRETWARLIDQALSKGGIAEACSVLKRVGSHIYPGDGAVLPLDTLCLH 1342

Query: 365  LEKAALEHLSSGVELVGDEDVARALLAACRGAPEPVLSIYDQLLSNGXXXXXXXXXXXXX 544
            LEKAALE L+SGVE VGDEDV RALLAAC+GA EPVL+ Y+QLLSNG             
Sbjct: 1343 LEKAALERLASGVEPVGDEDVVRALLAACKGATEPVLNTYEQLLSNGAILPSPNLRLRLL 1402

Query: 545  XXXXXXXXEWAMSIFANRMDTTTAGASFIFGGRLSLEQTTMVNQGVRDKITSALNRYMTE 724
                    EWAMS+FA RM T+  GAS I GG  SLEQTT++NQGVRDKITSA NRYMTE
Sbjct: 1403 RSVLVVLREWAMSVFAQRMGTSATGASLILGGAFSLEQTTVINQGVRDKITSAANRYMTE 1462

Query: 725  VRRLALPQSQTEPVYRGFRDLEEKLLA 805
            VRRLALPQSQTE VYRGFR+LEE L++
Sbjct: 1463 VRRLALPQSQTEAVYRGFRELEESLIS 1489


>emb|CBI26833.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  383 bits (984), Expect = e-104
 Identities = 195/267 (73%), Positives = 216/267 (80%)
 Frame = +2

Query: 5    TESLQNNSFPHSNLMADANFAIAAREKAKELSLELKSITQLYNEYAVPFRLWEICLEMLN 184
            +ES+ N S   SNL AD NFA   +EKA+E+SL+LKSITQLYNEYAVPF LWEICLEML 
Sbjct: 465  SESVLNESCSESNLNADTNFANTVQEKAREISLDLKSITQLYNEYAVPFELWEICLEMLY 524

Query: 185  FANYSGDADSKIVRETWARLLDQALSKGGVAEACSVLKRVGSNLYPGDGACLPLDTLCLH 364
            FANYSGDADS IVRETWARL+DQALSKGG+AEACSVLKRVGS++YPGDGA LPLDTLCLH
Sbjct: 525  FANYSGDADSSIVRETWARLIDQALSKGGIAEACSVLKRVGSHIYPGDGAVLPLDTLCLH 584

Query: 365  LEKAALEHLSSGVELVGDEDVARALLAACRGAPEPVLSIYDQLLSNGXXXXXXXXXXXXX 544
            LEKAALE L+SGVE VGDEDV RALLAAC+GA EPVL+ Y+QLLSNG             
Sbjct: 585  LEKAALERLASGVEPVGDEDVVRALLAACKGATEPVLNTYEQLLSNGAILPSPNLRLRLL 644

Query: 545  XXXXXXXXEWAMSIFANRMDTTTAGASFIFGGRLSLEQTTMVNQGVRDKITSALNRYMTE 724
                    EWAMS+FA RM T+  GAS I GG  SLEQTT++NQGVRDKITSA NRYMTE
Sbjct: 645  RSVLVVLREWAMSVFAQRMGTSATGASLILGGAFSLEQTTVINQGVRDKITSAANRYMTE 704

Query: 725  VRRLALPQSQTEPVYRGFRDLEEKLLA 805
            VRRLALPQSQTE VYRGFR+LEE L++
Sbjct: 705  VRRLALPQSQTEAVYRGFRELEESLIS 731


>ref|XP_002526002.1| protein with unknown function [Ricinus communis]
            gi|223534734|gb|EEF36426.1| protein with unknown function
            [Ricinus communis]
          Length = 1490

 Score =  373 bits (958), Expect = e-101
 Identities = 190/268 (70%), Positives = 215/268 (80%)
 Frame = +2

Query: 2    ITESLQNNSFPHSNLMADANFAIAAREKAKELSLELKSITQLYNEYAVPFRLWEICLEML 181
            ++E +QN S P +N  A+ ++A  AREKAKELSL+LKSITQLYNEYAVPF LWEICLEML
Sbjct: 1218 MSEPVQNGSVPDNN--ANPDYAKVAREKAKELSLDLKSITQLYNEYAVPFELWEICLEML 1275

Query: 182  NFANYSGDADSKIVRETWARLLDQALSKGGVAEACSVLKRVGSNLYPGDGACLPLDTLCL 361
             FANY+GD DS IVRETWARL+DQALS+GG+AEACSVLKRVGS++YPGDGA LPLDTLCL
Sbjct: 1276 YFANYTGDTDSSIVRETWARLIDQALSRGGIAEACSVLKRVGSHIYPGDGAILPLDTLCL 1335

Query: 362  HLEKAALEHLSSGVELVGDEDVARALLAACRGAPEPVLSIYDQLLSNGXXXXXXXXXXXX 541
            HLEKAALE L SG E VGDEDVARALLAAC+GA EPVL+ YDQLLSNG            
Sbjct: 1336 HLEKAALERLESGAEPVGDEDVARALLAACKGATEPVLNAYDQLLSNGAILPSPNLRLRL 1395

Query: 542  XXXXXXXXXEWAMSIFANRMDTTTAGASFIFGGRLSLEQTTMVNQGVRDKITSALNRYMT 721
                     EWAMS+ A RM TTT+GAS I GG  S EQTT++NQG+RDKITSA NRYMT
Sbjct: 1396 LQSLLVVLREWAMSVLAQRMGTTTSGASLILGGTFSQEQTTVINQGIRDKITSAANRYMT 1455

Query: 722  EVRRLALPQSQTEPVYRGFRDLEEKLLA 805
            EV+RL LPQS+TE VYRGFRDLEE L++
Sbjct: 1456 EVKRLPLPQSKTEAVYRGFRDLEESLIS 1483


>ref|XP_003558458.1| PREDICTED: nuclear pore complex protein Nup155-like isoform 2
            [Brachypodium distachyon]
          Length = 1469

 Score =  360 bits (924), Expect = 2e-97
 Identities = 181/262 (69%), Positives = 205/262 (78%)
 Frame = +2

Query: 20   NNSFPHSNLMADANFAIAAREKAKELSLELKSITQLYNEYAVPFRLWEICLEMLNFANYS 199
            ++ FPH N++ADA  A  A++KAKELSL LKSITQLYN+YAVPF LWE+CLEMLNFANYS
Sbjct: 1206 SDPFPHDNILADAESAKVAKDKAKELSLNLKSITQLYNDYAVPFNLWEVCLEMLNFANYS 1265

Query: 200  GDADSKIVRETWARLLDQALSKGGVAEACSVLKRVGSNLYPGDGACLPLDTLCLHLEKAA 379
            GDADSKIVRE WARLLDQ L++GGVAEACSV+KRVGS L P DGACLPLD +CLHLEKAA
Sbjct: 1266 GDADSKIVREIWARLLDQTLTRGGVAEACSVVKRVGSKLDPADGACLPLDIICLHLEKAA 1325

Query: 380  LEHLSSGVELVGDEDVARALLAACRGAPEPVLSIYDQLLSNGXXXXXXXXXXXXXXXXXX 559
            L+ LSSG ELVGDEDVARALL AC+G  EPVL++YDQLLSNG                  
Sbjct: 1326 LDRLSSGEELVGDEDVARALLGACKGLAEPVLAVYDQLLSNGAIVPSLNLKLRLLRSVLA 1385

Query: 560  XXXEWAMSIFANRMDTTTAGASFIFGGRLSLEQTTMVNQGVRDKITSALNRYMTEVRRLA 739
               EW MS+  +++ TTTAGASF   G  SL QT  +NQGVRDKI S  NRYMTEVRRL 
Sbjct: 1386 ILREWGMSVITHKLGTTTAGASFFQDGTFSLNQTGSLNQGVRDKIISLANRYMTEVRRLN 1445

Query: 740  LPQSQTEPVYRGFRDLEEKLLA 805
            LPQ+QT+ VYRGFRDLEEKLL+
Sbjct: 1446 LPQNQTDNVYRGFRDLEEKLLS 1467


>ref|XP_003558457.1| PREDICTED: nuclear pore complex protein Nup155-like isoform 1
            [Brachypodium distachyon]
          Length = 1462

 Score =  360 bits (924), Expect = 2e-97
 Identities = 181/262 (69%), Positives = 205/262 (78%)
 Frame = +2

Query: 20   NNSFPHSNLMADANFAIAAREKAKELSLELKSITQLYNEYAVPFRLWEICLEMLNFANYS 199
            ++ FPH N++ADA  A  A++KAKELSL LKSITQLYN+YAVPF LWE+CLEMLNFANYS
Sbjct: 1199 SDPFPHDNILADAESAKVAKDKAKELSLNLKSITQLYNDYAVPFNLWEVCLEMLNFANYS 1258

Query: 200  GDADSKIVRETWARLLDQALSKGGVAEACSVLKRVGSNLYPGDGACLPLDTLCLHLEKAA 379
            GDADSKIVRE WARLLDQ L++GGVAEACSV+KRVGS L P DGACLPLD +CLHLEKAA
Sbjct: 1259 GDADSKIVREIWARLLDQTLTRGGVAEACSVVKRVGSKLDPADGACLPLDIICLHLEKAA 1318

Query: 380  LEHLSSGVELVGDEDVARALLAACRGAPEPVLSIYDQLLSNGXXXXXXXXXXXXXXXXXX 559
            L+ LSSG ELVGDEDVARALL AC+G  EPVL++YDQLLSNG                  
Sbjct: 1319 LDRLSSGEELVGDEDVARALLGACKGLAEPVLAVYDQLLSNGAIVPSLNLKLRLLRSVLA 1378

Query: 560  XXXEWAMSIFANRMDTTTAGASFIFGGRLSLEQTTMVNQGVRDKITSALNRYMTEVRRLA 739
               EW MS+  +++ TTTAGASF   G  SL QT  +NQGVRDKI S  NRYMTEVRRL 
Sbjct: 1379 ILREWGMSVITHKLGTTTAGASFFQDGTFSLNQTGSLNQGVRDKIISLANRYMTEVRRLN 1438

Query: 740  LPQSQTEPVYRGFRDLEEKLLA 805
            LPQ+QT+ VYRGFRDLEEKLL+
Sbjct: 1439 LPQNQTDNVYRGFRDLEEKLLS 1460


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