BLASTX nr result

ID: Dioscorea21_contig00014859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014859
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communi...    58   9e-07
ref|XP_003573952.1| PREDICTED: exosome component 10-like [Brachy...    55   4e-06

>ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 857

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = +2

Query: 5   ETRIEEAPMSLSELSSSFQQCFKSLNEIKGAKRNQRSAQQPVDLNPQFRPFDYADARQHI 184
           ET  E  P SLS+LS+SFQ+CF+S NE K  + N + +Q P  L  Q +PFDYA AR+ +
Sbjct: 737 ETDEEGEPASLSDLSTSFQKCFQSNNENKTNENNMQKSQDPTGL-LQLKPFDYAAARKEV 795

Query: 185 RF 190
            F
Sbjct: 796 IF 797


>ref|XP_003573952.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
          Length = 906

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
 Frame = +2

Query: 17   EEAPMSLS--ELSSSFQQCFKSLNEIKGAKRNQRSAQQPVDLNPQFRPFDYADARQHIRF 190
            E+  MS S  ELSS  +Q F+S+NE +  ++N ++ ++P + + Q +PFDYA+AR++I F
Sbjct: 788  EDTEMSSSPRELSSGNEQRFRSINESRNVQQNHKALEEP-EFHDQLKPFDYAEARKNISF 846

Query: 191  XXXXXXXXXXXXSQDSVRSRKXXXXXXXXXXXXXXXXXXFQQPRRRQAF 337
                           ++                      FQ PRRRQAF
Sbjct: 847  GEVKSERRKDNAVARAINKDSGDKRRTSKQPGGEEDEGDFQNPRRRQAF 895


Top