BLASTX nr result

ID: Dioscorea21_contig00014842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014842
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|NP_001060830.1| Os08g0112400 [Oryza sativa Japonica Group] g...   158   4e-37
gb|EEC82801.1| hypothetical protein OsI_27570 [Oryza sativa Indi...   157   6e-37
ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containi...   155   2e-36

>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/154 (51%), Positives = 104/154 (67%), Gaps = 26/154 (16%)
 Frame = -2

Query: 385 ADLQHGRELHCYIMKHRFEGDGRQLLSNSLLDMYSKSG---------------------- 272
           A+LQHG+E HCYIMKH+ + +   LL N+L+DMYS+SG                      
Sbjct: 432 ANLQHGKEFHCYIMKHK-QFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTS 490

Query: 271 ----YGMQGEGAISLKLFNRMIECGIEPDHITMVAILSACSHSGLVTQGQMLFDKMVSLH 104
               YGM+GEG  +LKLF  M +  I+PDH+TMVA+L+ACSHSGLV QGQ+LF +M+ +H
Sbjct: 491 MILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVH 550

Query: 103 RIVPRMEHYSCMVDLFGRVGLLRKAEEIMIRMPF 2
            IVPR+EHY+CM DLFGR GLL KA+E +  MP+
Sbjct: 551 GIVPRLEHYACMADLFGRAGLLNKAKEFITGMPY 584


>ref|NP_001060830.1| Os08g0112400 [Oryza sativa Japonica Group]
           gi|42408356|dbj|BAD09508.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113622799|dbj|BAF22744.1| Os08g0112400 [Oryza
           sativa Japonica Group]
          Length = 667

 Score =  158 bits (400), Expect = 4e-37
 Identities = 85/152 (55%), Positives = 102/152 (67%), Gaps = 26/152 (17%)
 Frame = -2

Query: 379 LQHGRELHCYIMKHRFEGDGRQLLSNSLLDMYSKS------------------------- 275
           L HGRELHCYI+KH  E D  +L+ NSL+DMYSK                          
Sbjct: 394 LCHGRELHCYILKH--ELDSSKLMENSLVDMYSKCRQMVVAQRVFELMQFRDKHAYTSLV 451

Query: 274 -GYGMQGEGAISLKLFNRMIECGIEPDHITMVAILSACSHSGLVTQGQMLFDKMVSLHRI 98
            GYG+Q EG +SLKLF+ MI   IEPDH+T VA+LSACSHSGLVTQGQ+LF KMVS+  I
Sbjct: 452 LGYGLQREGHVSLKLFDEMIVNSIEPDHVTFVAVLSACSHSGLVTQGQLLFAKMVSIFGI 511

Query: 97  VPRMEHYSCMVDLFGRVGLLRKAEEIMIRMPF 2
            PR+EH+SCMVDL+ R GLL+ AE I+ +MPF
Sbjct: 512 APRVEHFSCMVDLYCREGLLKMAEVIIDKMPF 543


>gb|EEC82801.1| hypothetical protein OsI_27570 [Oryza sativa Indica Group]
          Length = 1194

 Score =  157 bits (398), Expect = 6e-37
 Identities = 85/152 (55%), Positives = 101/152 (66%), Gaps = 26/152 (17%)
 Frame = -2

Query: 379 LQHGRELHCYIMKHRFEGDGRQLLSNSLLDMYSKS------------------------- 275
           L HGRELHCYI+KH  E D  +L+ NSL+DMYSK                          
Sbjct: 394 LCHGRELHCYILKH--ELDSSKLMENSLVDMYSKCRQMVVAQRVFELMQFRDKHAYTSLV 451

Query: 274 -GYGMQGEGAISLKLFNRMIECGIEPDHITMVAILSACSHSGLVTQGQMLFDKMVSLHRI 98
            GYG+Q EG +SLKLF+ MI   IEPDH+T VA+LSACSHSGLVTQGQ+LF KMVS+  I
Sbjct: 452 LGYGLQREGHVSLKLFDEMIVNSIEPDHVTFVAVLSACSHSGLVTQGQLLFAKMVSIFGI 511

Query: 97  VPRMEHYSCMVDLFGRVGLLRKAEEIMIRMPF 2
            PR+EH+SCMVDL+ R GLL+ AE I+  MPF
Sbjct: 512 APRVEHFSCMVDLYCREGLLKMAEVIIDNMPF 543


>ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
           gi|449481506|ref|XP_004156203.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score =  156 bits (395), Expect = 1e-36
 Identities = 81/154 (52%), Positives = 102/154 (66%), Gaps = 26/154 (16%)
 Frame = -2

Query: 385 ADLQHGRELHCYIMKHRFEGDGRQLLSNSLLDMYSKSG---------------------- 272
           ADLQHGRE HCYI KHR   D   LL N+L+DMY+++G                      
Sbjct: 431 ADLQHGREFHCYITKHRDFRD-HLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTS 489

Query: 271 ----YGMQGEGAISLKLFNRMIECGIEPDHITMVAILSACSHSGLVTQGQMLFDKMVSLH 104
               YGMQGEG  +++LF  M    I+PDHITM+A+LSACSHSGLV Q ++LF +M S+H
Sbjct: 490 LIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVH 549

Query: 103 RIVPRMEHYSCMVDLFGRVGLLRKAEEIMIRMPF 2
            + PR+EHY+CM DLFGRVGLL KA+EI+ RMP+
Sbjct: 550 GLSPRLEHYACMADLFGRVGLLNKAKEIITRMPY 583


>dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|50509708|dbj|BAD31746.1|
           putative pentatricopeptide (PPR) repeat-containing
           protein [Oryza sativa Japonica Group]
          Length = 703

 Score =  155 bits (393), Expect = 2e-36
 Identities = 81/154 (52%), Positives = 105/154 (68%), Gaps = 26/154 (16%)
 Frame = -2

Query: 385 ADLQHGRELHCYIMKHRFEGDGRQLLSNSLLDMYSKSG---------------------- 272
           A+LQHG+ELH +I+KH F+G   +LL NSL+DMYSKSG                      
Sbjct: 424 ANLQHGQELHGHIVKHGFKG--YRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTS 481

Query: 271 ----YGMQGEGAISLKLFNRMIECGIEPDHITMVAILSACSHSGLVTQGQMLFDKMVSLH 104
               YGMQG+G ++L+LF +MI+ GI+PDHI MV +LSACSHSGLV +G+ LF+KMV  +
Sbjct: 482 MIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISY 541

Query: 103 RIVPRMEHYSCMVDLFGRVGLLRKAEEIMIRMPF 2
            I P+MEHYSCM+DL+ R GLL KAEE++   PF
Sbjct: 542 GIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPF 575


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