BLASTX nr result

ID: Dioscorea21_contig00014821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014821
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270834.1| PREDICTED: ribose-5-phosphate isomerase A [V...   177   1e-42
ref|XP_003546296.1| PREDICTED: ribose-5-phosphate isomerase A-li...   175   4e-42
ref|XP_002317071.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
gb|ABK96323.1| unknown [Populus trichocarpa x Populus deltoides]      171   7e-41
ref|XP_004166552.1| PREDICTED: LOW QUALITY PROTEIN: probable rib...   162   3e-38

>ref|XP_002270834.1| PREDICTED: ribose-5-phosphate isomerase A [Vitis vinifera]
           gi|296089229|emb|CBI39001.3| unnamed protein product
           [Vitis vinifera]
          Length = 294

 Score =  177 bits (448), Expect = 1e-42
 Identities = 93/140 (66%), Positives = 116/140 (82%), Gaps = 1/140 (0%)
 Frame = +1

Query: 82  SRRRRPTLM-ACAADTNLALLEAAKHAVDRYVRNGMVIGLGSGCASCLAIQYLGGRLRDG 258
           +R R P++  +C AD + ALL+AAKH VD Y+++GMVIGLGSG AS +AIQYLG +LR G
Sbjct: 31  TRCRFPSVTRSCLADASSALLQAAKHTVDTYIKSGMVIGLGSGHASDMAIQYLGRQLRTG 90

Query: 259 ALQDIVGIPMSVSSATEAAKAGIPLELCRESLQIDFAFDDADVIEEGSLTAVIGRRKLEG 438
           AL+DI GIPMSV+SA+EAAK GIPL   ++  QIDFAFDDADVIEEG+L A+IGRR+L+G
Sbjct: 91  ALKDITGIPMSVASASEAAKVGIPLGHYQDCSQIDFAFDDADVIEEGTLVAIIGRRRLQG 150

Query: 439 GDSIIQEKSILKAAGRVAFI 498
            +SIIQEKSILKAA ++ FI
Sbjct: 151 NESIIQEKSILKAADKLVFI 170


>ref|XP_003546296.1| PREDICTED: ribose-5-phosphate isomerase A-like [Glycine max]
          Length = 291

 Score =  175 bits (443), Expect = 4e-42
 Identities = 98/165 (59%), Positives = 123/165 (74%)
 Frame = +1

Query: 4   ASASFSSPARIPFASRRSAGIYRPCPSRRRRPTLMACAADTNLALLEAAKHAVDRYVRNG 183
           +S+SFS+  R+   S       R C     R    +C  D++ ALL AA+H VD YV++G
Sbjct: 6   SSSSFST--RLLLHSHTPLVCRRRCRPNFLRMVTRSCLDDSS-ALLRAAQHTVDTYVKSG 62

Query: 184 MVIGLGSGCASCLAIQYLGGRLRDGALQDIVGIPMSVSSATEAAKAGIPLELCRESLQID 363
           MV+GLGSG AS +AIQ+LG +LR G L+DIVGIPMSVSSA+EAAKAGIPL+  + S QID
Sbjct: 63  MVVGLGSGHASGMAIQHLGSQLRTGNLKDIVGIPMSVSSASEAAKAGIPLDTYQGSSQID 122

Query: 364 FAFDDADVIEEGSLTAVIGRRKLEGGDSIIQEKSILKAAGRVAFI 498
           FAFDDADVIEEG+L A+IGRRKL+GG+SIIQEKSI+ +A +  FI
Sbjct: 123 FAFDDADVIEEGTLVAIIGRRKLQGGESIIQEKSIINSANKCVFI 167


>ref|XP_002317071.1| predicted protein [Populus trichocarpa] gi|222860136|gb|EEE97683.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score =  171 bits (434), Expect = 4e-41
 Identities = 93/162 (57%), Positives = 126/162 (77%), Gaps = 1/162 (0%)
 Frame = +1

Query: 16  FSSPARIPFASR-RSAGIYRPCPSRRRRPTLMACAADTNLALLEAAKHAVDRYVRNGMVI 192
           +S+P RI  +S+ RS+   R C   ++    +   AD++  LL AAKH VD+++++GMV+
Sbjct: 11  YSTPVRIKTSSKPRSSS--RTC---KKTVPFLVTRADSSSLLLHAAKHTVDKHIQSGMVV 65

Query: 193 GLGSGCASCLAIQYLGGRLRDGALQDIVGIPMSVSSATEAAKAGIPLELCRESLQIDFAF 372
           GLGSG AS LAIQYLG  LR GAL+DIVG+PMSV+SA+EAAKAGIPL++ ++S QIDFAF
Sbjct: 66  GLGSGQASGLAIQYLGRLLRTGALKDIVGVPMSVTSASEAAKAGIPLDVYQDSSQIDFAF 125

Query: 373 DDADVIEEGSLTAVIGRRKLEGGDSIIQEKSILKAAGRVAFI 498
           DDAD+IEE +L A+IGR+K +  +SIIQEKSILKAA ++ F+
Sbjct: 126 DDADIIEEETLVAIIGRQKSQSDESIIQEKSILKAANKLVFM 167


>gb|ABK96323.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 285

 Score =  171 bits (432), Expect = 7e-41
 Identities = 92/162 (56%), Positives = 126/162 (77%), Gaps = 1/162 (0%)
 Frame = +1

Query: 16  FSSPARIPFASR-RSAGIYRPCPSRRRRPTLMACAADTNLALLEAAKHAVDRYVRNGMVI 192
           +S+P RI  +S+ RS+   R C   ++    +   AD++  LL AAKH VD+++++GMV+
Sbjct: 11  YSTPVRIKTSSKPRSSS--RTC---KKTVPFLVTRADSSSLLLHAAKHTVDKHIQSGMVV 65

Query: 193 GLGSGCASCLAIQYLGGRLRDGALQDIVGIPMSVSSATEAAKAGIPLELCRESLQIDFAF 372
           GLGSG AS +AIQYLG  LR GAL+DIVG+PMSV+SA+EAAKAGIPL++ ++S QIDFAF
Sbjct: 66  GLGSGQASGMAIQYLGRLLRTGALKDIVGVPMSVTSASEAAKAGIPLDVYQDSSQIDFAF 125

Query: 373 DDADVIEEGSLTAVIGRRKLEGGDSIIQEKSILKAAGRVAFI 498
           DDAD+IEE +L A+IGR+K +  +SIIQEKSILKAA ++ F+
Sbjct: 126 DDADIIEEETLVAIIGRQKSQSDESIIQEKSILKAANKLVFM 167


>ref|XP_004166552.1| PREDICTED: LOW QUALITY PROTEIN: probable ribose-5-phosphate
           isomerase-like [Cucumis sativus]
          Length = 295

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/121 (69%), Positives = 103/121 (85%)
 Frame = +1

Query: 136 LLEAAKHAVDRYVRNGMVIGLGSGCASCLAIQYLGGRLRDGALQDIVGIPMSVSSATEAA 315
           LL+AAKH VD YV++GMVIGLGSG AS +AIQYLG  LR GAL+DIVG+PMS++SA+EAA
Sbjct: 52  LLQAAKHTVDTYVKSGMVIGLGSGQASGMAIQYLGRLLRAGALKDIVGVPMSIASASEAA 111

Query: 316 KAGIPLELCRESLQIDFAFDDADVIEEGSLTAVIGRRKLEGGDSIIQEKSILKAAGRVAF 495
           KAGIPL+   +S QIDF+FDDAD+IEEG+L AVIG RK +  DSIIQEKSIL A+ ++AF
Sbjct: 112 KAGIPLDQFNDSSQIDFSFDDADIIEEGTLIAVIGHRKPQVEDSIIQEKSILNASNQLAF 171

Query: 496 I 498
           +
Sbjct: 172 M 172


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