BLASTX nr result

ID: Dioscorea21_contig00014810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014810
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...   215   5e-54
ref|XP_002277017.1| PREDICTED: transcription initiation factor T...   210   2e-52
ref|XP_002299376.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_003569565.1| PREDICTED: transcription initiation factor T...   205   7e-51
ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [S...   205   7e-51

>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score =  215 bits (548), Expect = 5e-54
 Identities = 105/126 (83%), Positives = 118/126 (93%)
 Frame = +1

Query: 196 NMGVELGKLPSSGDPDKMATMQSILAQFTEDQMSRYESFRRSGFQKSNMKRLLASIVGSQ 375
           N+ VEL K PSSGDPDKMA MQ+IL+QFTE+QMSRYESFRR+GFQK+NMKRLLASI G+Q
Sbjct: 95  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQ 154

Query: 376 KISVPMNIVVSGIAKMFVGELIETARIVMTERGDMGPIRPCHIREAYRRLRLEGKIPKRS 555
           KISVPM IVVSGIAKMFVGEL+ETAR+VMTER D GPIRPCH+REAYRRL+LEGKIP++S
Sbjct: 155 KISVPMTIVVSGIAKMFVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKS 214

Query: 556 VPRLFR 573
           VPRLFR
Sbjct: 215 VPRLFR 220


>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
           vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
           product [Vitis vinifera]
          Length = 198

 Score =  210 bits (534), Expect = 2e-52
 Identities = 103/126 (81%), Positives = 115/126 (91%)
 Frame = +1

Query: 196 NMGVELGKLPSSGDPDKMATMQSILAQFTEDQMSRYESFRRSGFQKSNMKRLLASIVGSQ 375
           NM VELGKLP+SGDP KMA MQ+IL+QFTE+QMSRYESFRRSGFQK+NMK+LL SI GSQ
Sbjct: 73  NMDVELGKLPTSGDPHKMAKMQAILSQFTEEQMSRYESFRRSGFQKANMKKLLVSITGSQ 132

Query: 376 KISVPMNIVVSGIAKMFVGELIETARIVMTERGDMGPIRPCHIREAYRRLRLEGKIPKRS 555
           KIS PM IV SGIAKMFVGEL+ETAR+VMTER + GPIRPCHIREAYRRL+LEGK+P+RS
Sbjct: 133 KISAPMTIVASGIAKMFVGELVETARMVMTERKETGPIRPCHIREAYRRLKLEGKVPRRS 192

Query: 556 VPRLFR 573
           V RLFR
Sbjct: 193 VSRLFR 198


>ref|XP_002299376.1| predicted protein [Populus trichocarpa] gi|222846634|gb|EEE84181.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  207 bits (526), Expect = 2e-51
 Identities = 104/126 (82%), Positives = 112/126 (88%)
 Frame = +1

Query: 196 NMGVELGKLPSSGDPDKMATMQSILAQFTEDQMSRYESFRRSGFQKSNMKRLLASIVGSQ 375
           NM VEL KL S+ DPDKMA MQ+ILAQFTE QMSRYESFRRS  QK+NMKRLL SI GSQ
Sbjct: 97  NMDVELSKLASTADPDKMAKMQTILAQFTEGQMSRYESFRRSALQKTNMKRLLVSITGSQ 156

Query: 376 KISVPMNIVVSGIAKMFVGELIETARIVMTERGDMGPIRPCHIREAYRRLRLEGKIPKRS 555
           KIS+PM IVV GIAKMFVGEL+ETARIVMTER + GPIRPCHIREAYRRL+LEGK+PKRS
Sbjct: 157 KISLPMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRS 216

Query: 556 VPRLFR 573
           VPRLFR
Sbjct: 217 VPRLFR 222


>ref|XP_003569565.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           [Brachypodium distachyon]
          Length = 216

 Score =  205 bits (521), Expect = 7e-51
 Identities = 104/127 (81%), Positives = 116/127 (91%), Gaps = 1/127 (0%)
 Frame = +1

Query: 196 NMGVELGKLPS-SGDPDKMATMQSILAQFTEDQMSRYESFRRSGFQKSNMKRLLASIVGS 372
           +M V+L KLPS + DPDK+A M ++L+QFTEDQM+RYESFRRSGFQKSNMK+LLASI GS
Sbjct: 90  HMEVDLDKLPSGTSDPDKLAKMNALLSQFTEDQMNRYESFRRSGFQKSNMKKLLASITGS 149

Query: 373 QKISVPMNIVVSGIAKMFVGELIETARIVMTERGDMGPIRPCHIREAYRRLRLEGKIPKR 552
           QKIS+P  IVVSGIAKMFVGE+IETARIVMTER D GPIRPCHIREAYRRL+LEGKIPKR
Sbjct: 150 QKISMPTTIVVSGIAKMFVGEVIETARIVMTERKDSGPIRPCHIREAYRRLKLEGKIPKR 209

Query: 553 SVPRLFR 573
           SVPRLFR
Sbjct: 210 SVPRLFR 216


>ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]
           gi|241928124|gb|EES01269.1| hypothetical protein
           SORBIDRAFT_03g031220 [Sorghum bicolor]
          Length = 209

 Score =  205 bits (521), Expect = 7e-51
 Identities = 104/126 (82%), Positives = 114/126 (90%), Gaps = 1/126 (0%)
 Frame = +1

Query: 199 MGVELGKLPSS-GDPDKMATMQSILAQFTEDQMSRYESFRRSGFQKSNMKRLLASIVGSQ 375
           M V+L KLPSS GDPDK+A M +IL+QFTE QM+RYESFRRSGFQKSNMKRLL  I GSQ
Sbjct: 84  MEVDLEKLPSSTGDPDKLAKMNAILSQFTEQQMNRYESFRRSGFQKSNMKRLLVGITGSQ 143

Query: 376 KISVPMNIVVSGIAKMFVGELIETARIVMTERGDMGPIRPCHIREAYRRLRLEGKIPKRS 555
           KIS+P +IVVSGIAKMFVGELIETAR+VMTER D GPIRPCHIREAYRRL+LEGKIP+RS
Sbjct: 144 KISIPTSIVVSGIAKMFVGELIETARVVMTERKDSGPIRPCHIREAYRRLKLEGKIPRRS 203

Query: 556 VPRLFR 573
           VPRLFR
Sbjct: 204 VPRLFR 209


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