BLASTX nr result

ID: Dioscorea21_contig00014786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014786
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [S...   242   4e-62
ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group] g...   231   1e-58
ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 ...   224   1e-56
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
tpg|DAA45216.1| TPA: hypothetical protein ZEAMMB73_557479 [Zea m...   172   4e-41

>ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
            gi|241921770|gb|EER94914.1| hypothetical protein
            SORBIDRAFT_01g036270 [Sorghum bicolor]
          Length = 1184

 Score =  242 bits (618), Expect = 4e-62
 Identities = 134/231 (58%), Positives = 164/231 (70%), Gaps = 5/231 (2%)
 Frame = -3

Query: 679  HNAKWKESLIARTISRRNSNLMQLVYG-PTXXXXXXXXXXXXXXXXXSDDENFFKPKGER 503
            + +KWKESL+ART SRR++NLMQLVYG P+                 S D+ FF PKG++
Sbjct: 550  NTSKWKESLLARTQSRRSANLMQLVYGLPSTKLGGGALEENDDGEANSSDDEFFIPKGQK 609

Query: 502  EKKLNHKSGSHVNLEDRSKFLNIQLKDWSNEDLIRGIRDRFVTGDWSKAAQRGQ--MEDG 329
            + K    S   ++ ED SKF   +L+DWSNEDLI+ IRDRFVTG+WSKAA RGQ   E+G
Sbjct: 610  QAKNESPSFEDIDAEDCSKFFKAELRDWSNEDLIKSIRDRFVTGNWSKAALRGQDADENG 669

Query: 328  DNDESVYGDFEDLETGEVYKSKPTDDMEGNECILEDTMENEDRRLKKLALRAKFDSQ--Y 155
            ++ E +YGDFEDLETGEV+ S+  +D E      +D  E E+RRLKKLALRAKFD+Q  Y
Sbjct: 670  EDGEEIYGDFEDLETGEVHMSQAVEDAE-----RKDDPEVEERRLKKLALRAKFDAQLTY 724

Query: 154  DGSEQSDEEADGGKKKKYHQSQANEGGYFDKLKEEIELRKQMNLSELNDLD 2
            DGSE SD+E D  KKK   Q Q+N GGYFDKLKEE+ELRKQMN+SELNDLD
Sbjct: 725  DGSELSDDEVDDVKKKS-RQEQSNGGGYFDKLKEEMELRKQMNMSELNDLD 774


>ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group]
            gi|113548492|dbj|BAF11935.1| Os03g0333100 [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  231 bits (589), Expect = 1e-58
 Identities = 126/230 (54%), Positives = 160/230 (69%), Gaps = 4/230 (1%)
 Frame = -3

Query: 679  HNAKWKESLIARTISRRNSNLMQLVYGPTXXXXXXXXXXXXXXXXXSDDENFFKPKGERE 500
            +N+KWKESL+ART+SRR++NLMQLVYG                     DE FF PKG+++
Sbjct: 545  NNSKWKESLLARTLSRRSANLMQLVYGQASKKLDEGNDSSAEES---SDEEFFVPKGQKK 601

Query: 499  KKLNHKSG-SHVNLEDRSKFLNIQLKDWSNEDLIRGIRDRFVTGDWSKAAQRGQ--MEDG 329
            +  N  +    ++ ED SKF   +L+DWS+EDLI+ IRDRFVTG+WSKAA RGQ   E+ 
Sbjct: 602  QAKNESTSFDDMDAEDYSKFFKTELRDWSDEDLIKSIRDRFVTGNWSKAALRGQEINEND 661

Query: 328  DNDESVYGDFEDLETGEVYKSKPTDDMEGN-ECILEDTMENEDRRLKKLALRAKFDSQYD 152
             +DE V GDFEDLETGEV+ SK  ++  GN     +D +  E+RRLKKLAL+AKFD++YD
Sbjct: 662  VDDEEVDGDFEDLETGEVHTSKAYENTSGNGGTHKQDDLAMEERRLKKLALKAKFDAEYD 721

Query: 151  GSEQSDEEADGGKKKKYHQSQANEGGYFDKLKEEIELRKQMNLSELNDLD 2
            GS+ S EE D   KK   + + N GGYFDKLKEEIE+RKQMN+SELNDLD
Sbjct: 722  GSDLSGEEVDNDTKKS-KREETNGGGYFDKLKEEIEIRKQMNISELNDLD 770


>ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Brachypodium
            distachyon]
          Length = 1178

 Score =  224 bits (571), Expect = 1e-56
 Identities = 122/229 (53%), Positives = 160/229 (69%), Gaps = 3/229 (1%)
 Frame = -3

Query: 679  HNAKWKESLIARTISRRNSNLMQLVYGPTXXXXXXXXXXXXXXXXXSDDENFFKPKGERE 500
            + +KWK+SL+ART+SRR+++LMQLVYG                     DE  F PKG+++
Sbjct: 549  NTSKWKKSLLARTLSRRSASLMQLVYGQPSTAVDTNRVEEDS-----SDEEIFIPKGQKK 603

Query: 499  KKLNH-KSGSHVNLEDRSKFLNIQLKDWSNEDLIRGIRDRFVTGDWSKAAQRGQM--EDG 329
            +  N   S   V+ ED SKF   +L DWS+EDL + IRDRFVTGDWSKA+ RG+   E+G
Sbjct: 604  QAKNELPSFDDVDAEDYSKFFKAELNDWSDEDLAKSIRDRFVTGDWSKASLRGREIDENG 663

Query: 328  DNDESVYGDFEDLETGEVYKSKPTDDMEGNECILEDTMENEDRRLKKLALRAKFDSQYDG 149
            + DE + GDFEDLETGEV+KS+  ++  G   + +D ++ E+ RLKKLAL+AKFDS+YDG
Sbjct: 664  EGDEEIDGDFEDLETGEVHKSQAAENGSGKPGV-QDELKVEELRLKKLALKAKFDSEYDG 722

Query: 148  SEQSDEEADGGKKKKYHQSQANEGGYFDKLKEEIELRKQMNLSELNDLD 2
            SE S E+ D  +KK   + Q++ GGYFDKLKEEIELRKQMN+SELNDLD
Sbjct: 723  SELSGEQVDEDRKKS-KRDQSDGGGYFDKLKEEIELRKQMNISELNDLD 770


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  181 bits (459), Expect = 1e-43
 Identities = 107/229 (46%), Positives = 138/229 (60%), Gaps = 5/229 (2%)
 Frame = -3

Query: 673  AKWKESLIARTISRRNSNLMQLVYGPTXXXXXXXXXXXXXXXXXSDDENFFKPKGEREKK 494
            +KWKESL+ RT S++N+NLMQ VYG +                   D+ FFK KGE  KK
Sbjct: 556  SKWKESLVDRTFSKQNNNLMQRVYGKSASTPINEKQDGSEDEE--SDDEFFKLKGEGNKK 613

Query: 493  LNHKSG-SHVNLEDRSKFLNIQ-LKDWSNEDLIRGIRDRFVTGDWSKAAQRGQM---EDG 329
            L       +V+ ++ SKF N   LK+W +E++   IRDRFVTGDWSKAAQR ++    D 
Sbjct: 614  LREGFDVENVDADECSKFTNYSDLKNWKDEEIYESIRDRFVTGDWSKAAQRNKLPTANDE 673

Query: 328  DNDESVYGDFEDLETGEVYKSKPTDDMEGNECILEDTMENEDRRLKKLALRAKFDSQYDG 149
            D+++SVYGDFEDLETGE + +   ++        ED +E E R+LKKLAL          
Sbjct: 674  DDEDSVYGDFEDLETGEKHGNHQKEESGNVSMQKEDELE-EQRKLKKLALH--------- 723

Query: 148  SEQSDEEADGGKKKKYHQSQANEGGYFDKLKEEIELRKQMNLSELNDLD 2
                 EE D     K+H+ QANE GY DKLKEEIE+RKQ N++ELNDLD
Sbjct: 724  -----EEVDEKHGAKFHRGQANESGYIDKLKEEIEIRKQRNIAELNDLD 767


>tpg|DAA45216.1| TPA: hypothetical protein ZEAMMB73_557479 [Zea mays]
          Length = 725

 Score =  172 bits (437), Expect = 4e-41
 Identities = 93/178 (52%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
 Frame = -3

Query: 679  HNAKWKESLIARTISRRNSNLMQLVYGPTXXXXXXXXXXXXXXXXXSDDENFFKPKGERE 500
            + +KWKESL+ART+SRR+ NLMQLVYG                   S D+ FF+PKG+++
Sbjct: 552  NTSKWKESLLARTMSRRSDNLMQLVYGLPSTKLGSVAEENDDSEANSSDDEFFRPKGQKQ 611

Query: 499  KKLNHK-SGSHVNLEDRSKFLNIQLKDWSNEDLIRGIRDRFVTGDWSKAAQRGQMED--G 329
            +  N   S   ++ ED SKF   +LKDWSNEDLI+ IRDRFVTG+WSKA  RGQ  D  G
Sbjct: 612  QAKNESPSFGDIDGEDCSKFFKAELKDWSNEDLIKSIRDRFVTGNWSKATLRGQDTDDRG 671

Query: 328  DNDESVYGDFEDLETGEVYKSKPTDDMEGNECILEDTMENEDRRLKKLALRAKFDSQY 155
            ++DE +YGDFEDLETGEV+ ++  +++E      +D  E E+RRLKKLA RAKFD+QY
Sbjct: 672  EDDEEMYGDFEDLETGEVHMAQTDENVEA-----KDDPEVEERRLKKLAQRAKFDAQY 724


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