BLASTX nr result

ID: Dioscorea21_contig00014760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014760
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   149   5e-34
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   149   5e-34
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   148   6e-34
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   145   7e-33
ref|XP_002308772.1| predicted protein [Populus trichocarpa] gi|2...   143   3e-32

>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  149 bits (375), Expect = 5e-34
 Identities = 72/143 (50%), Positives = 106/143 (74%)
 Frame = +1

Query: 1    VQSLGDSGDVVGIWGSLLAACKVHGKFELGKLVAERLFQIKQNNDVDAGYHVLLSNVYAA 180
            V  LG+ G+V+ IWGSLLAAC++H +FELGKLVA++L ++++ N    GYHVLLSN+YA 
Sbjct: 677  VIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKING-KTGYHVLLSNIYAE 735

Query: 181  EGKWQTVNKVRKEMRDRGLRKEPGSSWIEVGDSSHRFMSRDQRHPENEQISSLLQGLISE 360
            E  W+ V+ VRK+MR+RGL+KE GSSWIE+    + F S+D++HP+++QI S+L+ L+ E
Sbjct: 736  ERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLME 795

Query: 361  MKLSGYDNMPVDDLCLPGVIDAE 429
            MK +GY   P+    L G ++ +
Sbjct: 796  MKHAGY--RPLSTSYLGGFLEPD 816


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  149 bits (375), Expect = 5e-34
 Identities = 72/143 (50%), Positives = 106/143 (74%)
 Frame = +1

Query: 1    VQSLGDSGDVVGIWGSLLAACKVHGKFELGKLVAERLFQIKQNNDVDAGYHVLLSNVYAA 180
            V  LG+ G+V+ IWGSLLAAC++H +FELGKLVA++L ++++ N    GYHVLLSN+YA 
Sbjct: 653  VIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKING-KTGYHVLLSNIYAE 711

Query: 181  EGKWQTVNKVRKEMRDRGLRKEPGSSWIEVGDSSHRFMSRDQRHPENEQISSLLQGLISE 360
            E  W+ V+ VRK+MR+RGL+KE GSSWIE+    + F S+D++HP+++QI S+L+ L+ E
Sbjct: 712  ERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLME 771

Query: 361  MKLSGYDNMPVDDLCLPGVIDAE 429
            MK +GY   P+    L G ++ +
Sbjct: 772  MKHAGY--RPLSTSYLGGFLEPD 792


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic [Vitis vinifera]
          Length = 825

 Score =  148 bits (374), Expect = 6e-34
 Identities = 68/126 (53%), Positives = 94/126 (74%)
 Frame = +1

Query: 1    VQSLGDSGDVVGIWGSLLAACKVHGKFELGKLVAERLFQIKQNNDVDAGYHVLLSNVYAA 180
            V+ LG+ G+  GIWGSLL AC++HG+FELGK+VA +L ++++ + +  GYHVLLSN+YAA
Sbjct: 685  VKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSL-TGYHVLLSNIYAA 743

Query: 181  EGKWQTVNKVRKEMRDRGLRKEPGSSWIEVGDSSHRFMSRDQRHPENEQISSLLQGLISE 360
            EG W  V++VRKEMR +GL KE G SW+EV    + FMSRD +HP+  +I  +L+ L  E
Sbjct: 744  EGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAME 803

Query: 361  MKLSGY 378
            MK +GY
Sbjct: 804  MKDAGY 809


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  145 bits (365), Expect = 7e-33
 Identities = 67/126 (53%), Positives = 93/126 (73%)
 Frame = +1

Query: 1    VQSLGDSGDVVGIWGSLLAACKVHGKFELGKLVAERLFQIKQNNDVDAGYHVLLSNVYAA 180
            V+ LG+ G+   IWGSLL AC++HG+FELGK+VA +L ++++ + +  GYHVLLSN+YAA
Sbjct: 685  VKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXL-TGYHVLLSNIYAA 743

Query: 181  EGKWQTVNKVRKEMRDRGLRKEPGSSWIEVGDSSHRFMSRDQRHPENEQISSLLQGLISE 360
            EG W  V++VRKEMR +GL KE G SW+EV    + FMSRD +HP+  +I  +L+ L  E
Sbjct: 744  EGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAME 803

Query: 361  MKLSGY 378
            MK +GY
Sbjct: 804  MKDAGY 809


>ref|XP_002308772.1| predicted protein [Populus trichocarpa] gi|222854748|gb|EEE92295.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  143 bits (360), Expect = 3e-32
 Identities = 66/124 (53%), Positives = 96/124 (77%)
 Frame = +1

Query: 1   VQSLGDSGDVVGIWGSLLAACKVHGKFELGKLVAERLFQIKQNNDVDAGYHVLLSNVYAA 180
           V+ LG++G+V+ IWGSLL AC++H   ELG++VA++L ++++  ++  GYHVLLSN+YA 
Sbjct: 190 VKQLGEAGNVLEIWGSLLGACRLHEHVELGEVVAKKLLEMEKTGNI-TGYHVLLSNIYAE 248

Query: 181 EGKWQTVNKVRKEMRDRGLRKEPGSSWIEVGDSSHRFMSRDQRHPENEQISSLLQGLISE 360
           EG W  V+KVR+EMR++GL+KE GSSWI++G S  RF S+DQ HP +++I  +L GL  E
Sbjct: 249 EGNWVNVDKVRREMREKGLQKEVGSSWIDIGGSVARFTSKDQDHPHSDKIYEMLAGLAME 308

Query: 361 MKLS 372
           MK S
Sbjct: 309 MKKS 312


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