BLASTX nr result

ID: Dioscorea21_contig00014694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014694
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medi...   208   3e-52
ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group] g...   208   4e-52
emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]        208   4e-52
ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [S...   207   7e-52
ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein lig...   206   1e-51

>ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
           gi|358348400|ref|XP_003638235.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
           gi|355491712|gb|AES72915.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
           gi|355504170|gb|AES85373.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  208 bits (530), Expect = 3e-52
 Identities = 93/107 (86%), Positives = 104/107 (97%)
 Frame = -1

Query: 322 IVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACG 143
           IVS+VCGADH  AYSESK++VYSWGWGDFGRLGHGNSSD+F PQPI+ALQG++IKQIACG
Sbjct: 69  IVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACG 128

Query: 142 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSFQGIPVK 2
           DSHCLAVTM+GEVQSWGRNQNGQLGLGTTEDSLVPQKIQ+FQG+P+K
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIK 175



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/101 (37%), Positives = 65/101 (64%)
 Frame = -1

Query: 322 IVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACG 143
           I  +  GA+H+ A +E+  ++Y WGWG +G LG G+ +D   P+ + ++   K+  +ACG
Sbjct: 174 IKMVAAGAEHSVAITENG-ELYGWGWGRYGNLGLGDRNDRCIPEKV-SVDCDKMVLVACG 231

Query: 142 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSF 20
             H ++V+  GE+ ++G ++ GQLG G  +D LVP K+Q+F
Sbjct: 232 WRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAF 272



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/81 (44%), Positives = 50/81 (61%)
 Frame = -1

Query: 265 QVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACGDSHCLAVTMDGEVQSWGRN 86
           Q+Y WGW  FG++G G++ D  +P  +K     K+ QI+CG  H +AVT    V SWGR 
Sbjct: 295 QLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRG 354

Query: 85  QNGQLGLGTTEDSLVPQKIQS 23
            NGQLG+G T D   P+ I++
Sbjct: 355 TNGQLGIGDTIDWNYPKIIEA 375



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/99 (33%), Positives = 57/99 (57%)
 Frame = -1

Query: 322 IVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACG 143
           +V + CG  H  + S S  ++Y++GW  +G+LGHG+  D   P  ++A     I Q++ G
Sbjct: 225 MVLVACGWRHTISVSSSG-ELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGG 283

Query: 142 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ 26
             H +A+T  G++  WG N+ GQ+G+G   D   P +++
Sbjct: 284 WRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVK 322


>ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
           gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza
           sativa Japonica Group] gi|113564420|dbj|BAF14763.1|
           Os04g0435700 [Oryza sativa Japonica Group]
           gi|125548381|gb|EAY94203.1| hypothetical protein
           OsI_15977 [Oryza sativa Indica Group]
           gi|125590466|gb|EAZ30816.1| hypothetical protein
           OsJ_14886 [Oryza sativa Japonica Group]
           gi|215704772|dbj|BAG94800.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 453

 Score =  208 bits (529), Expect = 4e-52
 Identities = 95/108 (87%), Positives = 102/108 (94%)
 Frame = -1

Query: 325 GIVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIAC 146
           GI S++CGADH TAYSE + QVYSWGWGDFGRLGHGNSSDVFTPQP+KALQGIKIKQIAC
Sbjct: 77  GITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIAC 136

Query: 145 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSFQGIPVK 2
           GDSHCLAVTM GEVQSWGRNQNGQLGLGTTEDSL+PQKIQSF+G+ VK
Sbjct: 137 GDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVK 184



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/99 (38%), Positives = 61/99 (61%)
 Frame = -1

Query: 313 IVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACGDSH 134
           I  GA+H  A +E    +Y WGWG +G LG G+ +D   P+ + +++G K+  IACG  H
Sbjct: 186 IAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRH 244

Query: 133 CLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSFQ 17
            + V+  G + ++G ++ GQLG G  ED LVP K+++ +
Sbjct: 245 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALK 283



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/99 (38%), Positives = 60/99 (60%)
 Frame = -1

Query: 322 IVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACG 143
           +V I CG  H    S S   +Y++GW  +G+LGHG+  D   P  ++AL+   I QI+ G
Sbjct: 235 MVLIACGWRHTITVSSSG-SLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGG 293

Query: 142 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ 26
             H +A+T DG++  WG N+ GQ+G+G T+D   P +++
Sbjct: 294 WRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVK 332



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/99 (37%), Positives = 51/99 (51%)
 Frame = -1

Query: 319 VSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACGD 140
           +S + G    T    S  ++Y WGW  FG++G G++ D   P  +K  +  K+ Q+ACG 
Sbjct: 287 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGW 346

Query: 139 SHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQS 23
            H LA T    V SWGR  +GQLG G   D   P  I +
Sbjct: 347 RHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDA 385


>emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
          Length = 256

 Score =  208 bits (529), Expect = 4e-52
 Identities = 95/108 (87%), Positives = 102/108 (94%)
 Frame = -1

Query: 325 GIVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIAC 146
           GI S++CGADH TAYSE + QVYSWGWGDFGRLGHGNSSDVFTPQP+KALQGIKIKQIAC
Sbjct: 77  GITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIAC 136

Query: 145 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSFQGIPVK 2
           GDSHCLAVTM GEVQSWGRNQNGQLGLGTTEDSL+PQKIQSF+G+ VK
Sbjct: 137 GDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVK 184


>ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
           gi|241937692|gb|EES10837.1| hypothetical protein
           SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  207 bits (527), Expect = 7e-52
 Identities = 93/108 (86%), Positives = 103/108 (95%)
 Frame = -1

Query: 325 GIVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIAC 146
           GI S++CGADH TAYSE +LQVYSWGWGDFGRLGHGNSSDVFTPQP+KALQG+KIKQIAC
Sbjct: 67  GITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIAC 126

Query: 145 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSFQGIPVK 2
           GDSHCLAVTM G+VQSWGRNQNGQLGLGTTEDSL+PQKIQ+F+G+ VK
Sbjct: 127 GDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVK 174



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/99 (37%), Positives = 61/99 (61%)
 Frame = -1

Query: 313 IVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACGDSH 134
           I  GA+H  A +E    +Y WGWG +G LG G+ +D   P+ + +++G K+  +ACG  H
Sbjct: 176 IAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRH 234

Query: 133 CLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSFQ 17
            + V+  G + ++G ++ GQLG G  ED LVP K+++ +
Sbjct: 235 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALK 273



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/98 (35%), Positives = 59/98 (60%)
 Frame = -1

Query: 322 IVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACG 143
           +V + CG  H    S+S   +Y++GW  +G+LGHG+  D   P  ++AL+   I QI+ G
Sbjct: 225 MVLVACGWRHTITVSDSG-NLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGG 283

Query: 142 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKI 29
             H +A+T +G++  WG N+ GQ+G+G  +D   P ++
Sbjct: 284 WRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQV 321



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/99 (37%), Positives = 53/99 (53%)
 Frame = -1

Query: 319 VSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACGD 140
           +S + G    T    S+ ++Y WGW  FG++G GN+ D  +P  +   +  KI Q+ACG 
Sbjct: 277 ISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGW 336

Query: 139 SHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQS 23
            H LA++    V SWGR  +GQLG G   D   P  I +
Sbjct: 337 RHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDA 375


>ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera] gi|296082603|emb|CBI21608.3| unnamed protein
           product [Vitis vinifera]
          Length = 445

 Score =  206 bits (525), Expect = 1e-51
 Identities = 94/107 (87%), Positives = 101/107 (94%)
 Frame = -1

Query: 322 IVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACG 143
           +VS+ CGADH TAYSES  QVYSWGWGDFGRLGHGNSSD+FTPQPIKAL G++IKQIACG
Sbjct: 70  VVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACG 129

Query: 142 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSFQGIPVK 2
           DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ+FQG+ VK
Sbjct: 130 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK 176



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/99 (36%), Positives = 63/99 (63%)
 Frame = -1

Query: 313 IVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACGDSH 134
           +  GA+H  A +E   ++Y WGWG +G LG G+ +D   P+ +  ++G+K+ ++ACG  H
Sbjct: 178 VAAGAEHTAAVTEDG-ELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRH 236

Query: 133 CLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQSFQ 17
            ++V+  G + ++G ++ GQLG G  ED L P K+++ Q
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQ 275



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/99 (37%), Positives = 60/99 (60%)
 Frame = -1

Query: 322 IVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACG 143
           +V + CG  H  + S S   +Y++GW  +G+LGHG+  D  TP  ++ALQ   I +I+ G
Sbjct: 227 MVKVACGWRHTISVSSSG-GLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGG 285

Query: 142 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ 26
             H +A+T DG++  WG N+ GQ+G+G   D   P +++
Sbjct: 286 WRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK 324



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/99 (38%), Positives = 55/99 (55%)
 Frame = -1

Query: 322 IVSIVCGADHATAYSESKLQVYSWGWGDFGRLGHGNSSDVFTPQPIKALQGIKIKQIACG 143
           ++S + G    T    S  ++Y WGW  FG++G G++ D  +P  +K     K+  I+CG
Sbjct: 278 LISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCG 337

Query: 142 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ 26
             H LAVT    V SWGR  NGQLG G + D  +P+ I+
Sbjct: 338 WRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIE 376


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