BLASTX nr result

ID: Dioscorea21_contig00014692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014692
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY96578.1| hypothetical protein OsI_18483 [Oryza sativa Indi...    62   6e-08
gb|EEE62356.1| hypothetical protein OsJ_17145 [Oryza sativa Japo...    61   8e-08
ref|NP_001054669.1| Os05g0150900 [Oryza sativa Japonica Group] g...    61   8e-08
ref|XP_002271456.2| PREDICTED: histidyl-tRNA synthetase-like [Vi...    58   7e-07
emb|CBI31248.3| unnamed protein product [Vitis vinifera]               58   7e-07

>gb|EAY96578.1| hypothetical protein OsI_18483 [Oryza sativa Indica Group]
          Length = 885

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
 Frame = +3

Query: 3   ASIVGEELRSKVGDVFQKECPCIDALINDFNSITSASSTGSNYVLVLHRVYDMLIKFREI 182
           A I   ELR K+ D  +         I+D   +    +  S+ V VL  VY+ L+KFR+I
Sbjct: 278 ARIDDAELRKKLTDGVE---------IDDLKGMLGKITIDSDAVSVLRGVYNSLLKFRDI 328

Query: 183 LAWESALALFAIEVDESVEKPAV------------VPLXXXXXXXXXXXXXXXTLGKGTS 326
           LAWE+A+A+  IE+D S+EKP                                TLGKGTS
Sbjct: 329 LAWEAAVAMAVIEMDSSIEKPQAGEENEAGSSTENPQASGEKPKGDKKSKKKKTLGKGTS 388

Query: 327 IVRQLLKDRLSPDASVENV 383
            V  LL+D ++    V +V
Sbjct: 389 AVLMLLRDHVTNGKEVLSV 407


>gb|EEE62356.1| hypothetical protein OsJ_17145 [Oryza sativa Japonica Group]
          Length = 848

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
 Frame = +3

Query: 3   ASIVGEELRSKVGDVFQKECPCIDALINDFNSITSASSTGSNYVLVLHRVYDMLIKFREI 182
           A I   ELR K+ D  +         I+D   +    +  S+ V VL  VY+ L+KFR+I
Sbjct: 241 ARIDDAELRKKLTDGVE---------IDDLKGMLGKVTIDSDAVSVLRGVYNSLLKFRDI 291

Query: 183 LAWESALALFAIEVDESVEKPAVVP------------LXXXXXXXXXXXXXXXTLGKGTS 326
           LAWE+A+A+  IE+D S+EKP                                TLGKGTS
Sbjct: 292 LAWEAAVAMAVIEMDSSIEKPQACEENEAGSSTENPHASGEKPKGDKKSKKKKTLGKGTS 351

Query: 327 IVRQLLKDRLSPDASVENV 383
            V  LL+D ++    V +V
Sbjct: 352 AVLMLLRDLVTNGKEVLSV 370


>ref|NP_001054669.1| Os05g0150900 [Oryza sativa Japonica Group]
           gi|109940176|sp|P93422.2|SYH_ORYSJ RecName:
           Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
           synthetase; Short=HisRS gi|54291833|gb|AAV32201.1|
           histidyl-tRNA synthetase [Oryza sativa Japonica Group]
           gi|113578220|dbj|BAF16583.1| Os05g0150900 [Oryza sativa
           Japonica Group]
          Length = 788

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
 Frame = +3

Query: 3   ASIVGEELRSKVGDVFQKECPCIDALINDFNSITSASSTGSNYVLVLHRVYDMLIKFREI 182
           A I   ELR K+ D  +         I+D   +    +  S+ V VL  VY+ L+KFR+I
Sbjct: 181 ARIDDAELRKKLTDGVE---------IDDLKGMLGKVTIDSDAVSVLRGVYNSLLKFRDI 231

Query: 183 LAWESALALFAIEVDESVEKPAVVP------------LXXXXXXXXXXXXXXXTLGKGTS 326
           LAWE+A+A+  IE+D S+EKP                                TLGKGTS
Sbjct: 232 LAWEAAVAMAVIEMDSSIEKPQACEENEAGSSTENPHASGEKPKGDKKSKKKKTLGKGTS 291

Query: 327 IVRQLLKDRLSPDASVENV 383
            V  LL+D ++    V +V
Sbjct: 292 AVLMLLRDLVTNGKEVLSV 310


>ref|XP_002271456.2| PREDICTED: histidyl-tRNA synthetase-like [Vitis vinifera]
          Length = 890

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
 Frame = +3

Query: 6   SIVGEELRSKVGDVFQKECPCIDALINDFNSITSASSTGSNYVLVLHRVYDMLIKFREIL 185
           SI  + LRS +  +F+ +CP ID L N +  I+ A     +YV  LH V  +L    EI+
Sbjct: 275 SIGSDNLRSSLVGLFEGKCPSIDGLKNAYRLISEAVFE-EDYVKFLHEVNGLLGMVWEIV 333

Query: 186 AWESALALFAIEVDESVEKPAVVPL--XXXXXXXXXXXXXXXTLGKGTSIVRQLLKDRL 356
            WE+  A  ++E  ES+ K  V                     LGKGTS++ QL+K+RL
Sbjct: 334 IWEAITAFVSLEGSESIGKIGVEVNGGDQKGNVGKKSEKKKKVLGKGTSVIVQLVKERL 392


>emb|CBI31248.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
 Frame = +3

Query: 6   SIVGEELRSKVGDVFQKECPCIDALINDFNSITSASSTGSNYVLVLHRVYDMLIKFREIL 185
           SI  + LRS +  +F+ +CP ID L N +  I+ A     +YV  LH V  +L    EI+
Sbjct: 242 SIGSDNLRSSLVGLFEGKCPSIDGLKNAYRLISEAVFE-EDYVKFLHEVNGLLGMVWEIV 300

Query: 186 AWESALALFAIEVDESVEKPAVVPL--XXXXXXXXXXXXXXXTLGKGTSIVRQLLKDRL 356
            WE+  A  ++E  ES+ K  V                     LGKGTS++ QL+K+RL
Sbjct: 301 IWEAITAFVSLEGSESIGKIGVEVNGGDQKGNVGKKSEKKKKVLGKGTSVIVQLVKERL 359


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