BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014679
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572110.1| PREDICTED: ribosome biogenesis GTPase A-like...   246   8e-63
ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   243   9e-62
ref|XP_002467456.1| hypothetical protein SORBIDRAFT_01g028440 [S...   240   6e-61
gb|AAL86477.1|AC077693_16 putative GTPase domain containing prot...   238   2e-60
ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   234   3e-59

>ref|XP_003572110.1| PREDICTED: ribosome biogenesis GTPase A-like [Brachypodium
            distachyon]
          Length = 373

 Score =  246 bits (628), Expect = 8e-63
 Identities = 133/235 (56%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
 Frame = +2

Query: 497  MAAMAVTSLFAESVGAIVRELSLKKAADRLYGPCMAAFERAIIERAPLVDLVVEVRDARI 676
            MAA A    F+  +GA VR LS        YG  MAA +RAI  R PLVDLV+EVRDARI
Sbjct: 1    MAATAAAEAFSRRLGAAVRGLS-----GAWYGRHMAAADRAIRARLPLVDLVLEVRDARI 55

Query: 677  PLTSAFEPLRRLA---CSHKQMIVLNKVDLADRSLTEMWLRHFKMQNFICYGVNSHNKDS 847
            P TSAFEPLRR +      ++++ LNK DLAD S T+ W+   K +      +NSH+++S
Sbjct: 56   PATSAFEPLRRRSQEDLDGRRIVALNKADLADPSETQKWVAFMKQRGCSSVAINSHSRES 115

Query: 848  INELLRVVRARIRKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLKHA 1027
            I ELL VVR++IR++K  +   T T+LLVGIPNVGKSA++N+MHQIGR GA  KGKLKHA
Sbjct: 116  IKELLNVVRSKIREIKLGENDCTGTVLLVGIPNVGKSAIINAMHQIGRIGAAEKGKLKHA 175

Query: 1028 TVSSQPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSL 1192
             VSS PGET+DI  YK+ SHPNIYVLDTPG+L      D+ G +LAL+GAI DSL
Sbjct: 176  IVSSHPGETRDISGYKVASHPNIYVLDTPGILCRTFASDECGPRLALTGAIKDSL 230


>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
            gi|297744953|emb|CBI38545.3| unnamed protein product
            [Vitis vinifera]
          Length = 369

 Score =  243 bits (619), Expect = 9e-62
 Identities = 127/211 (60%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
 Frame = +2

Query: 563  LKKAADRLYGPCMAAFERAIIERAPLVDLVVEVRDARIPLTSAFEPLRRLACSHKQMIVL 742
            +K+AA   + P MAA  RA+ ER PLVDLV+EVRDARIPL+S ++ LR    S K++IVL
Sbjct: 14   VKRAAKTWFSPHMAAASRAVSERIPLVDLVLEVRDARIPLSSEYDQLRNFPSSSKRIIVL 73

Query: 743  NKVDLADRSLTEMWLRHFKMQNFICYGVNSHNKDSINELLRVVRARIRKLKG-DDRSYTS 919
            NK+DLA+R   + W+R+F+ QN I +GVNSHNKD+I E L+ ++A+++ +K  D  SYT+
Sbjct: 74   NKMDLANRLEIKEWMRYFEQQNCISFGVNSHNKDNIKECLKFLQAQVKGVKKIDHSSYTA 133

Query: 920  TILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLKHATVSSQPGETKDIISYKIGSHPNIY 1099
            TI+LVGIPNVGKSA+ NS+HQIGR  A  KGKLKHATVS  PGET+DI S KIGSHPN+Y
Sbjct: 134  TIMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPIPGETRDISSLKIGSHPNVY 193

Query: 1100 VLDTPGVLSGEIGVDDLGSKLALSGAIDDSL 1192
            VLDTPG+L  +I    + SKLAL+GAI D L
Sbjct: 194  VLDTPGILPPDILDVVVCSKLALTGAIKDCL 224


>ref|XP_002467456.1| hypothetical protein SORBIDRAFT_01g028440 [Sorghum bicolor]
            gi|241921310|gb|EER94454.1| hypothetical protein
            SORBIDRAFT_01g028440 [Sorghum bicolor]
          Length = 374

 Score =  240 bits (612), Expect = 6e-61
 Identities = 132/233 (56%), Positives = 163/233 (69%), Gaps = 5/233 (2%)
 Frame = +2

Query: 509  AVTSLFAESVGAIVRELSLKKAADRLYGPCMAAFERAIIERAPLVDLVVEVRDARIPLTS 688
            A   + +  +GA VR+LS        YG  MAA ERAI  R PLVDLV+EVRDAR+P +S
Sbjct: 4    AAAEVVSRRLGAAVRDLS-----GTWYGRHMAAAERAIRARLPLVDLVLEVRDARVPASS 58

Query: 689  AFEPLRR----LACSHKQMIVLNKVDLADRSLTEMWLRHFKMQNFI-CYGVNSHNKDSIN 853
            +FEPLRR    L    +++++LNK DLAD S TE W+ + K Q    C  VNSH+++SI 
Sbjct: 59   SFEPLRRRRGPLEPDRRRVVLLNKADLADPSETEEWVAYIKKQTSCPCVAVNSHSRESIK 118

Query: 854  ELLRVVRARIRKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLKHATV 1033
            ELL  V+ RI+++K  + + T+T LLVGIPNVGKSA+VN+MHQIGR  A  KGKLKHA V
Sbjct: 119  ELLNAVQTRIKEIKNGENNCTATALLVGIPNVGKSAIVNAMHQIGRIAAAEKGKLKHAIV 178

Query: 1034 SSQPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSL 1192
            SS PGET+DI  YK+ SHPNIYVLDTPGVLS     D  G +LAL+GAI DSL
Sbjct: 179  SSHPGETRDISGYKVASHPNIYVLDTPGVLSPRFANDGSGPRLALTGAIKDSL 231


>gb|AAL86477.1|AC077693_16 putative GTPase domain containing protein [Oryza sativa Japonica
            Group] gi|31433619|gb|AAP55111.1| expressed protein
            [Oryza sativa Japonica Group] gi|125533031|gb|EAY79596.1|
            hypothetical protein OsI_34736 [Oryza sativa Indica
            Group] gi|125575767|gb|EAZ17051.1| hypothetical protein
            OsJ_32544 [Oryza sativa Japonica Group]
          Length = 370

 Score =  238 bits (607), Expect = 2e-60
 Identities = 130/230 (56%), Positives = 159/230 (69%), Gaps = 2/230 (0%)
 Frame = +2

Query: 509  AVTSLFAESVGAIVRELSLKKAADRLYGPCMAAFERAIIERAPLVDLVVEVRDARIPLTS 688
            A T  F+  +   VR LS        YG  MAA +RAI  R PLVDLV+EVRDAR+P  S
Sbjct: 3    AATEAFSRRLSDAVRGLS-----GAWYGRHMAAADRAIRSRLPLVDLVLEVRDARVPAAS 57

Query: 689  AFEPLRRLACS--HKQMIVLNKVDLADRSLTEMWLRHFKMQNFICYGVNSHNKDSINELL 862
            AF PLRR +     ++++VLNK DLAD S TE W+ + K  +  C  +NSH+++ I ELL
Sbjct: 58   AFAPLRRRSPEPDRRRLVVLNKADLADPSQTEKWMAYMKQTSCSCVALNSHSREGIKELL 117

Query: 863  RVVRARIRKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLKHATVSSQ 1042
              VRA+IR++K  +   T T+LLVGIPNVGKSA+VN+MH+IGR GA  KGKLKHA VSS 
Sbjct: 118  NAVRAKIREIKLGESDCTGTVLLVGIPNVGKSAIVNAMHRIGRIGAAEKGKLKHAIVSSH 177

Query: 1043 PGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSL 1192
            PGETKDI  YK+ SHPNIYVLDTPGVLS     D+ G  LAL+GAI DS+
Sbjct: 178  PGETKDISGYKVASHPNIYVLDTPGVLSPVFFNDESGPLLALTGAIKDSM 227


>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
            gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
            biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  234 bits (597), Expect = 3e-59
 Identities = 127/231 (54%), Positives = 164/231 (70%), Gaps = 2/231 (0%)
 Frame = +2

Query: 506  MAVTSLFAESVGAIVRELSL-KKAADRLYGPCMAAFERAIIERAPLVDLVVEVRDARIPL 682
            MA  +L  + +G  + +L+   + +   Y   M A  RA+ ER PLVD V+EVRDARIP 
Sbjct: 1    MAAATLMRK-IGTAINQLAAGNRISSGWYDAHMEAASRAVAERIPLVDFVLEVRDARIPT 59

Query: 683  TSAFEPLRRLACSHKQMIVLNKVDLADRSLTEMWLRHFKMQNFICYGVNSHNKDSINELL 862
            +S +E ++    S K++IVLNK DLAD+S TE+W RHF+  N I YGVNSHNK++I E L
Sbjct: 60   SSEYEMMKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDHNCISYGVNSHNKENIREFL 119

Query: 863  RVVRARIRKLKGDDRS-YTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLKHATVSS 1039
              ++AR+R+LK    S + +T++LVGIPNVGKSA+ NS+HQIGR  A  KGKLKHA VSS
Sbjct: 120  NFLQARVRELKKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHAVVSS 179

Query: 1040 QPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSL 1192
            QPGETK+I S KI SHPNIYVLDTPG+   +I   ++ SKLAL+GAI D L
Sbjct: 180  QPGETKNISSLKIASHPNIYVLDTPGIFPPKIDDIEVCSKLALTGAIRDIL 230