BLASTX nr result

ID: Dioscorea21_contig00014676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014676
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466604.1| hypothetical protein SORBIDRAFT_01g010860 [S...   162   3e-38
ref|XP_003560681.1| PREDICTED: eukaryotic peptide chain release ...   161   5e-38
ref|NP_001151538.1| eukaryotic peptide chain release factor subu...   161   6e-38
dbj|BAK06486.1| predicted protein [Hordeum vulgare subsp. vulgare]    160   1e-37
dbj|BAJ94255.1| predicted protein [Hordeum vulgare subsp. vulgar...   160   1e-37

>ref|XP_002466604.1| hypothetical protein SORBIDRAFT_01g010860 [Sorghum bicolor]
           gi|241920458|gb|EER93602.1| hypothetical protein
           SORBIDRAFT_01g010860 [Sorghum bicolor]
          Length = 437

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/89 (88%), Positives = 85/89 (95%)
 Frame = +1

Query: 1   RLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKHSVSGEMVIK 180
           +LIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLK+S +GE VIK
Sbjct: 286 KLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKNSATGETVIK 345

Query: 181 HLNKDQEADQNQFRDPAANAELEVQEKTS 267
           HLNK+QEADQ+ FRDP+ NAELEVQEKTS
Sbjct: 346 HLNKEQEADQSHFRDPSTNAELEVQEKTS 374


>ref|XP_003560681.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Brachypodium distachyon]
           gi|357117871|ref|XP_003560685.1| PREDICTED: eukaryotic
           peptide chain release factor subunit 1-3-like
           [Brachypodium distachyon]
          Length = 437

 Score =  161 bits (408), Expect = 5e-38
 Identities = 78/89 (87%), Positives = 84/89 (94%)
 Frame = +1

Query: 1   RLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKHSVSGEMVIK 180
           +LIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETL+VWENLDVNRYVLKHSV+ E++IK
Sbjct: 286 KLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLMVWENLDVNRYVLKHSVTAEIIIK 345

Query: 181 HLNKDQEADQNQFRDPAANAELEVQEKTS 267
           HLNKDQEADQ+ FRD   NAELEVQEKTS
Sbjct: 346 HLNKDQEADQSNFRDETTNAELEVQEKTS 374


>ref|NP_001151538.1| eukaryotic peptide chain release factor subunit 1-1 [Zea mays]
           gi|195647508|gb|ACG43222.1| eukaryotic peptide chain
           release factor subunit 1-1 [Zea mays]
           gi|224035083|gb|ACN36617.1| unknown [Zea mays]
           gi|413933342|gb|AFW67893.1| eukaryotic peptide chain
           release factor subunit 1-1 isoform 1 [Zea mays]
           gi|413933343|gb|AFW67894.1| eukaryotic peptide chain
           release factor subunit 1-1 isoform 2 [Zea mays]
          Length = 437

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/89 (87%), Positives = 85/89 (95%)
 Frame = +1

Query: 1   RLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKHSVSGEMVIK 180
           +LIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLK++ +GE VIK
Sbjct: 286 KLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKNTATGETVIK 345

Query: 181 HLNKDQEADQNQFRDPAANAELEVQEKTS 267
           HLNK+QEADQ+ FRDP+ NAELEVQEKTS
Sbjct: 346 HLNKEQEADQSHFRDPSTNAELEVQEKTS 374


>dbj|BAK06486.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 437

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/89 (85%), Positives = 84/89 (94%)
 Frame = +1

Query: 1   RLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKHSVSGEMVIK 180
           +LIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETL+VWENLDVNRYVLKHS +GE++IK
Sbjct: 286 KLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLMVWENLDVNRYVLKHSATGEIIIK 345

Query: 181 HLNKDQEADQNQFRDPAANAELEVQEKTS 267
           HLNK+ E DQ+ FRDP+ NAELEVQEKTS
Sbjct: 346 HLNKETETDQSNFRDPSTNAELEVQEKTS 374


>dbj|BAJ94255.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326520812|dbj|BAJ92769.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326525939|dbj|BAJ93146.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 437

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/89 (85%), Positives = 84/89 (94%)
 Frame = +1

Query: 1   RLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKHSVSGEMVIK 180
           +LIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETL+VWENLDVNRYVLKHS +GE++IK
Sbjct: 286 KLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLMVWENLDVNRYVLKHSATGEIIIK 345

Query: 181 HLNKDQEADQNQFRDPAANAELEVQEKTS 267
           HLNK+ E DQ+ FRDP+ NAELEVQEKTS
Sbjct: 346 HLNKETETDQSNFRDPSTNAELEVQEKTS 374


Top