BLASTX nr result

ID: Dioscorea21_contig00014657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014657
         (1751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS...   123   2e-25
ref|XP_003526669.1| PREDICTED: transcriptional corepressor SEUSS...   110   2e-21
ref|XP_004164699.1| PREDICTED: transcriptional corepressor SEUSS...   105   4e-20
ref|XP_004146806.1| PREDICTED: transcriptional corepressor SEUSS...   105   4e-20
ref|XP_002300947.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-18

>ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS-like [Vitis vinifera]
          Length = 913

 Score =  123 bits (308), Expect = 2e-25
 Identities = 108/291 (37%), Positives = 131/291 (45%), Gaps = 12/291 (4%)
 Frame = -1

Query: 1031 MVPSGPPTP-GGAQSVTPSLLRSNSSILXXXXXXXXXXXXXXXXSLVSPRTQFXXXXXXX 855
            MVPSGPPTP GGAQ V PSLLRSNS +L                SLVSPRTQ+       
Sbjct: 1    MVPSGPPTPIGGAQPVPPSLLRSNSGML--GAQAGPVPPQTGFPSLVSPRTQY-----NN 53

Query: 854  XXXXXXXXNVSSLLNPSFGNGVPGPNAGFSGAQTLQHRANLXXXXXXXXXXXXXXXXSET 675
                    +VSSLL+ SFGNG  G N G SG  + Q R  +                  T
Sbjct: 54   MNLLGNVPSVSSLLSQSFGNG--GSNPGLSGPGSGQ-RGGIDAGAESDPLSGVGNGLGFT 110

Query: 674  DPLSF-----ASASTAAQGQQHFQNTPGNQLGQDHLQSQQLD------GVXXXXXXXXXX 528
             P SF     A+  +A QGQQ FQN  GNQ+  D  QSQQL+      G           
Sbjct: 111  PPASFVPTNMANPGSAGQGQQ-FQNPSGNQMLPDQQQSQQLEAQNFQHGQQPLQQFSAPL 169

Query: 527  XXXXXXQLRGAMGGVGNLAPVKMEPQMGPGDQNGPQQQLQSLHGNMGAAMKMEHXXXXXQ 348
                  Q +   GG+G + PVK+EPQ+   DQ+G QQQLQSL                  
Sbjct: 170  NTQQQQQYQSIRGGLGGVGPVKLEPQV-TNDQHGQQQQLQSLR----------------- 211

Query: 347  SLHGGMGAMKMESQQQLQSMRGSIGGVKIEPQQLQSLRNLGPVKLEQPHSD 195
                                  +IG VK+EPQQ+ ++R+L PVK+E  HSD
Sbjct: 212  ----------------------NIGPVKLEPQQIPTMRSLAPVKMEPQHSD 240


>ref|XP_003526669.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]
          Length = 953

 Score =  110 bits (274), Expect = 2e-21
 Identities = 104/310 (33%), Positives = 127/310 (40%), Gaps = 31/310 (10%)
 Frame = -1

Query: 1031 MVPSGPPTP-GGAQSVTPSLLRSNSSILXXXXXXXXXXXXXXXXSLVSPRTQFXXXXXXX 855
            MVP GPPTP GGAQSV+PSLLRSNS +L                 LVSPRTQF       
Sbjct: 44   MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPPQSSFPS--LVSPRTQFNNMNILG 101

Query: 854  XXXXXXXXNVSSLLNPSFGNGVPGPNAGFSGAQTLQHRANLXXXXXXXXXXXXXXXXSET 675
                     V+S+LN SF NGVP P  G SG  + Q  A                  +ET
Sbjct: 102  NMSN-----VTSILNQSFPNGVPNP--GLSGPGSSQRGA--------------IDTGAET 140

Query: 674  DPLS-------------------FASASTAAQGQ-QHFQNTPGNQLGQDHLQSQQLDGVX 555
            DPLS                     +A+++ QGQ Q F N   NQL  D   SQQL+   
Sbjct: 141  DPLSSVGNGMSFNNSSSTFVQSSIVNAASSGQGQGQQFSNPSSNQLLPDQQHSQQLEPQN 200

Query: 554  XXXXXXXXXXXXXXXQ----------LRGAMGGVGNLAPVKMEPQMGPGDQNGPQQQLQS 405
                                       +   GG+G + PVK+E      DQ G QQ    
Sbjct: 201  FQHGQQSMQQFSAPLNTQQPPQPQPHFQSIRGGIGGMGPVKLE--QVSNDQLGQQQ---- 254

Query: 404  LHGNMGAAMKMEHXXXXXQSLHGGMGAMKMESQQQLQSMRGSIGGVKIEPQQLQSLRNLG 225
                                            QQQLQS+R ++  VK+EPQQ+Q++R LG
Sbjct: 255  --------------------------------QQQLQSLR-NLASVKLEPQQMQTMRTLG 281

Query: 224  PVKLEQPHSD 195
            PVK+E  HSD
Sbjct: 282  PVKMEPQHSD 291


>ref|XP_004164699.1| PREDICTED: transcriptional corepressor SEUSS-like, partial [Cucumis
            sativus]
          Length = 398

 Score =  105 bits (262), Expect = 4e-20
 Identities = 98/298 (32%), Positives = 123/298 (41%), Gaps = 19/298 (6%)
 Frame = -1

Query: 1031 MVPSGPPTP-GGAQSVTPSLLRSNSSILXXXXXXXXXXXXXXXXSLVSPRTQFXXXXXXX 855
            MVPSGP TP GGAQSV+PSLLRSNS ++                SLVSPRTQF       
Sbjct: 1    MVPSGPSTPIGGAQSVSPSLLRSNSGMM---GAQGGLPSQSAFPSLVSPRTQF-----NS 52

Query: 854  XXXXXXXXNVSSLLNPSFGNGVPGPNAGFSGAQTLQHRANLXXXXXXXXXXXXXXXXSET 675
                    ++SSLLN SF NGV  PN+G SG    Q                        
Sbjct: 53   MNMLGNTPSMSSLLNQSFVNGV--PNSGPSGLGNSQRVGMDAGSESDPFSLVGNGVNFNN 110

Query: 674  DPLSFASASTAAQGQ------QHFQNTPGNQLGQDHLQSQQLDGVXXXXXXXXXXXXXXX 513
             P S  +++TA  G         F N    Q+  +  QSQQ++                 
Sbjct: 111  TPSSLVTSNTANPGSSSQVSVHQFSNHSSGQILPNQQQSQQIEPQNFQHSQHSMQQFATS 170

Query: 512  XQLRGAM------------GGVGNLAPVKMEPQMGPGDQNGPQQQLQSLHGNMGAAMKME 369
               + +             G + +  PVK+EPQM   D  G Q                 
Sbjct: 171  NNTQQSQQLQQQQQHQFQRGSLCSAGPVKLEPQMNNNDLQGQQ----------------- 213

Query: 368  HXXXXXQSLHGGMGAMKMESQQQLQSMRGSIGGVKIEPQQLQSLRNLGPVKLEQPHSD 195
                             ++ QQQLQSMR ++G VK+EPQQLQS+RN+GPVKLE   SD
Sbjct: 214  -----------------LQQQQQLQSMR-NLGPVKLEPQQLQSMRNMGPVKLEPQQSD 253


>ref|XP_004146806.1| PREDICTED: transcriptional corepressor SEUSS-like [Cucumis sativus]
          Length = 928

 Score =  105 bits (262), Expect = 4e-20
 Identities = 98/298 (32%), Positives = 123/298 (41%), Gaps = 19/298 (6%)
 Frame = -1

Query: 1031 MVPSGPPTP-GGAQSVTPSLLRSNSSILXXXXXXXXXXXXXXXXSLVSPRTQFXXXXXXX 855
            MVPSGP TP GGAQSV+PSLLRSNS ++                SLVSPRTQF       
Sbjct: 1    MVPSGPSTPIGGAQSVSPSLLRSNSGMM---GAQGGLPSQSAFPSLVSPRTQF-----NS 52

Query: 854  XXXXXXXXNVSSLLNPSFGNGVPGPNAGFSGAQTLQHRANLXXXXXXXXXXXXXXXXSET 675
                    ++SSLLN SF NGV  PN+G SG    Q                        
Sbjct: 53   MNMLGNTPSMSSLLNQSFVNGV--PNSGPSGLGNSQRVGMDAGSESDPFSLVGNGVNFNN 110

Query: 674  DPLSFASASTAAQGQ------QHFQNTPGNQLGQDHLQSQQLDGVXXXXXXXXXXXXXXX 513
             P S  +++TA  G         F N    Q+  +  QSQQ++                 
Sbjct: 111  TPSSLVTSNTANPGSSSQVSVHQFSNHSSGQILPNQQQSQQIEPQNFQHSQHSMQQFATS 170

Query: 512  XQLRGAM------------GGVGNLAPVKMEPQMGPGDQNGPQQQLQSLHGNMGAAMKME 369
               + +             G + +  PVK+EPQM   D  G Q                 
Sbjct: 171  NNTQQSQQLQQQQQHQFQRGSLCSAGPVKLEPQMNNNDLQGQQ----------------- 213

Query: 368  HXXXXXQSLHGGMGAMKMESQQQLQSMRGSIGGVKIEPQQLQSLRNLGPVKLEQPHSD 195
                             ++ QQQLQSMR ++G VK+EPQQLQS+RN+GPVKLE   SD
Sbjct: 214  -----------------LQQQQQLQSMR-NLGPVKLEPQQLQSMRNMGPVKLEPQQSD 253


>ref|XP_002300947.1| predicted protein [Populus trichocarpa] gi|222842673|gb|EEE80220.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 98/287 (34%), Positives = 122/287 (42%), Gaps = 8/287 (2%)
 Frame = -1

Query: 1031 MVPSGPPTP-GGAQSVTPSLLRSNSSILXXXXXXXXXXXXXXXXSLVSPRTQFXXXXXXX 855
            M+PSGPPTP GGAQSV+PSLLRSNS +L                SLVSPRTQF       
Sbjct: 1    MLPSGPPTPIGGAQSVSPSLLRSNSGML--GAQGGPLGSQTAFPSLVSPRTQF-----NN 53

Query: 854  XXXXXXXXNVSSLLNPSFGNGVPGPNAGFSGAQTLQHRANLXXXXXXXXXXXXXXXXSET 675
                    N+SSLLN SFGNG  GPN G  G  + Q R N+                   
Sbjct: 54   MSMLGNVPNMSSLLNQSFGNG--GPNPGLPGPGSSQ-RGNIDTGAESDPLSNGGNGMGFN 110

Query: 674  DPLS------FASASTAAQGQQH-FQNTPGNQLGQDHLQSQQLDGVXXXXXXXXXXXXXX 516
             P S        +   + Q Q H F N  GNQL  D  QSQQL+                
Sbjct: 111  APSSSFVPSNMVNPGPSCQVQGHQFSNPSGNQLLPDQQQSQQLEAQNFQHGQQSMQ---- 166

Query: 515  XXQLRGAMGGVGNLAPVKMEPQMGPGDQNGPQQQLQSLHGNMGAAMKMEHXXXXXQSLHG 336
                     G  N   V+             Q Q QS+ G +     ++         H 
Sbjct: 167  ------QFSGAHNTQQVQQ------------QHQFQSIRGGLAGVGPVKLEPHVTNDQH- 207

Query: 335  GMGAMKMESQQQLQSMRGSIGGVKIEPQQLQSLRNLGPVKLEQPHSD 195
              GA +++  Q L++M    G VK+E QQ+Q++R+L  VKLE  HSD
Sbjct: 208  --GARQLQQPQPLRNM----GPVKLEHQQIQTMRSLPTVKLEPQHSD 248


Top