BLASTX nr result

ID: Dioscorea21_contig00014645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014645
         (1458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW58923.1| carrier protein [Zea mays]                             278   e-104
ref|NP_001149413.1| mitochondrial carrier protein [Zea mays] gi|...   278   e-104
gb|ACG35363.1| mitochondrial carrier protein [Zea mays] gi|22403...   278   e-104
ref|XP_002448213.1| hypothetical protein SORBIDRAFT_06g023200 [S...   274   e-103
emb|CAE05654.2| OSJNBa0038O10.20 [Oryza sativa Japonica Group] g...   270   e-103

>gb|AFW58923.1| carrier protein [Zea mays]
          Length = 415

 Score =  278 bits (712), Expect(2) = e-104
 Identities = 144/266 (54%), Positives = 175/266 (65%), Gaps = 1/266 (0%)
 Frame = +2

Query: 62  LSESMFXXXXXXXXXXXXXXXXXXXPLDTLKTLLQVSA-GSGQKLSFFQVVDRVRSVSGL 238
           L ES+F                   PLDT+KTLLQ+ A G  QK+   QVVDR+ + SG 
Sbjct: 43  LGESVFAVHAVAGAAAISASAVAVYPLDTVKTLLQLGATGQKQKMGLRQVVDRLMAASGP 102

Query: 239 SGLYNXXXXXXXXXXXXXXARFGVFEILTAFYKDGREDEYVYVAEALLAGIVGGATEAVV 418
           +G YN              ARFG +E+LTAFYKDGRED YVY +EA+ AGI  GA EAV 
Sbjct: 103 AGFYNGIGWSILGKLPGLGARFGTYELLTAFYKDGREDNYVYYSEAMKAGIAAGAVEAVF 162

Query: 419 STPFELLKRRGQVSSTVKSRSMGAATKSLSELVPVAWKLLPTYNPDQKMWNQTLSLLTTL 598
            TPFEL K R QVSS + S++MG A  +  E  P+  KLLP Y PD ++WN T+SLL+ L
Sbjct: 163 CTPFELFKLRNQVSSVIPSKAMGPANVA-QESFPLLSKLLPGYVPDIRVWNNTMSLLSDL 221

Query: 599 PKKHSNMAVALKQYPWLLTGSGRPPLASEVKRPSDIISLEGWQALWRGLRPGIVRDCVFG 778
             KH +M  ALKQ+PW+LTGSG+PPL S+V  PS +I LEGW ALWRGLR GI RDCVFG
Sbjct: 222 SPKHPDMLGALKQHPWMLTGSGKPPLPSDVHLPSRVILLEGWGALWRGLRSGIARDCVFG 281

Query: 779 GIFFSTWQFIHIGMLNWKALDIDPPP 856
           G+FFSTWQF+H  ML WKA+++ P P
Sbjct: 282 GMFFSTWQFLHTVMLTWKAVNMSPKP 307



 Score =  128 bits (321), Expect(2) = e-104
 Identities = 62/100 (62%), Positives = 69/100 (69%)
 Frame = +1

Query: 937  GPVSPXXXXXXXXXXXXXXXXXXHTLDTAKCRSQCIVIPKYIAMERKLLRWKAPGNWIER 1116
            GPV P                  HT DTAK RS+C V+PKYIAMERK L+WKAPG WIER
Sbjct: 314  GPVPPFASSVAAGFAGAIAAAASHTFDTAKSRSECTVVPKYIAMERKFLKWKAPGTWIER 373

Query: 1117 VTGTSPADRNILFRGIWLRMARSGLASFAVVGSYLFAVDH 1236
             TG SPADRN+LFRGI LR ARSG+ASF +VGSY  AV+H
Sbjct: 374  KTGISPADRNVLFRGIGLRTARSGIASFVLVGSYYLAVNH 413


>ref|NP_001149413.1| mitochondrial carrier protein [Zea mays]
           gi|224034659|gb|ACN36405.1| unknown [Zea mays]
          Length = 415

 Score =  278 bits (712), Expect(2) = e-104
 Identities = 144/266 (54%), Positives = 175/266 (65%), Gaps = 1/266 (0%)
 Frame = +2

Query: 62  LSESMFXXXXXXXXXXXXXXXXXXXPLDTLKTLLQVSA-GSGQKLSFFQVVDRVRSVSGL 238
           L ES+F                   PLDT+KTLLQ+ A G  QK+   QVVDR+ + SG 
Sbjct: 43  LGESVFAVHAVAGAAAISASAVAVYPLDTVKTLLQLGATGQKQKMGLRQVVDRLMAASGP 102

Query: 239 SGLYNXXXXXXXXXXXXXXARFGVFEILTAFYKDGREDEYVYVAEALLAGIVGGATEAVV 418
           +G YN              ARFG +E+LTAFYKDGRED YVY +EA+ AGI  GA EAV 
Sbjct: 103 AGFYNGIGWSVLGKLPGLGARFGTYELLTAFYKDGREDNYVYYSEAMKAGIAAGAVEAVF 162

Query: 419 STPFELLKRRGQVSSTVKSRSMGAATKSLSELVPVAWKLLPTYNPDQKMWNQTLSLLTTL 598
            TPFEL K R QVSS + S++MG A  +  E  P+  KLLP Y PD ++WN T+SLL+ L
Sbjct: 163 CTPFELFKLRNQVSSVIPSKAMGPANVA-QESFPLLSKLLPGYVPDIRVWNNTMSLLSDL 221

Query: 599 PKKHSNMAVALKQYPWLLTGSGRPPLASEVKRPSDIISLEGWQALWRGLRPGIVRDCVFG 778
             KH +M  ALKQ+PW+LTGSG+PPL S+V  PS +I LEGW ALWRGLR GI RDCVFG
Sbjct: 222 SPKHPDMLGALKQHPWMLTGSGKPPLPSDVHLPSRVILLEGWGALWRGLRSGIARDCVFG 281

Query: 779 GIFFSTWQFIHIGMLNWKALDIDPPP 856
           G+FFSTWQF+H  ML WKA+++ P P
Sbjct: 282 GMFFSTWQFLHTVMLTWKAVNMSPKP 307



 Score =  128 bits (321), Expect(2) = e-104
 Identities = 62/100 (62%), Positives = 69/100 (69%)
 Frame = +1

Query: 937  GPVSPXXXXXXXXXXXXXXXXXXHTLDTAKCRSQCIVIPKYIAMERKLLRWKAPGNWIER 1116
            GPV P                  HT DTAK RS+C V+PKYIAMERK L+WKAPG WIER
Sbjct: 314  GPVPPFASSVAAGFAGAIAAAASHTFDTAKSRSECTVVPKYIAMERKFLKWKAPGTWIER 373

Query: 1117 VTGTSPADRNILFRGIWLRMARSGLASFAVVGSYLFAVDH 1236
             TG SPADRN+LFRGI LR ARSG+ASF +VGSY  AV+H
Sbjct: 374  KTGISPADRNVLFRGIGLRTARSGIASFVLVGSYYLAVNH 413


>gb|ACG35363.1| mitochondrial carrier protein [Zea mays]
           gi|224030889|gb|ACN34520.1| unknown [Zea mays]
          Length = 380

 Score =  278 bits (712), Expect(2) = e-104
 Identities = 144/266 (54%), Positives = 175/266 (65%), Gaps = 1/266 (0%)
 Frame = +2

Query: 62  LSESMFXXXXXXXXXXXXXXXXXXXPLDTLKTLLQVSA-GSGQKLSFFQVVDRVRSVSGL 238
           L ES+F                   PLDT+KTLLQ+ A G  QK+   QVVDR+ + SG 
Sbjct: 8   LGESVFAVHAVAGAAAISASAVAVYPLDTVKTLLQLGATGQKQKMGLRQVVDRLMAASGP 67

Query: 239 SGLYNXXXXXXXXXXXXXXARFGVFEILTAFYKDGREDEYVYVAEALLAGIVGGATEAVV 418
           +G YN              ARFG +E+LTAFYKDGRED YVY +EA+ AGI  GA EAV 
Sbjct: 68  AGFYNGIGWSILGKLPGLGARFGTYELLTAFYKDGREDNYVYYSEAMKAGIAAGAVEAVF 127

Query: 419 STPFELLKRRGQVSSTVKSRSMGAATKSLSELVPVAWKLLPTYNPDQKMWNQTLSLLTTL 598
            TPFEL K R QVSS + S++MG A  +  E  P+  KLLP Y PD ++WN T+SLL+ L
Sbjct: 128 CTPFELFKLRNQVSSVIPSKAMGPANVA-QESFPLLSKLLPGYVPDIRVWNNTMSLLSDL 186

Query: 599 PKKHSNMAVALKQYPWLLTGSGRPPLASEVKRPSDIISLEGWQALWRGLRPGIVRDCVFG 778
             KH +M  ALKQ+PW+LTGSG+PPL S+V  PS +I LEGW ALWRGLR GI RDCVFG
Sbjct: 187 SPKHPDMLGALKQHPWMLTGSGKPPLPSDVHLPSRVILLEGWGALWRGLRSGIARDCVFG 246

Query: 779 GIFFSTWQFIHIGMLNWKALDIDPPP 856
           G+FFSTWQF+H  ML WKA+++ P P
Sbjct: 247 GMFFSTWQFLHTVMLTWKAVNMSPKP 272



 Score =  128 bits (321), Expect(2) = e-104
 Identities = 62/100 (62%), Positives = 69/100 (69%)
 Frame = +1

Query: 937  GPVSPXXXXXXXXXXXXXXXXXXHTLDTAKCRSQCIVIPKYIAMERKLLRWKAPGNWIER 1116
            GPV P                  HT DTAK RS+C V+PKYIAMERK L+WKAPG WIER
Sbjct: 279  GPVPPFASSVAAGFAGAIAAAASHTFDTAKSRSECTVVPKYIAMERKFLKWKAPGTWIER 338

Query: 1117 VTGTSPADRNILFRGIWLRMARSGLASFAVVGSYLFAVDH 1236
             TG SPADRN+LFRGI LR ARSG+ASF +VGSY  AV+H
Sbjct: 339  KTGISPADRNVLFRGIGLRTARSGIASFVLVGSYYLAVNH 378


>ref|XP_002448213.1| hypothetical protein SORBIDRAFT_06g023200 [Sorghum bicolor]
           gi|241939396|gb|EES12541.1| hypothetical protein
           SORBIDRAFT_06g023200 [Sorghum bicolor]
          Length = 380

 Score =  274 bits (701), Expect(2) = e-103
 Identities = 138/241 (57%), Positives = 170/241 (70%), Gaps = 1/241 (0%)
 Frame = +2

Query: 137 PLDTLKTLLQV-SAGSGQKLSFFQVVDRVRSVSGLSGLYNXXXXXXXXXXXXXXARFGVF 313
           PLDT+KTLLQ+ +AG  +K+   QVVDR+ + SG +G Y+              ARFG +
Sbjct: 33  PLDTVKTLLQLGAAGQKEKMGLRQVVDRLLAASGPAGFYSGIGWSIMGKLPGLGARFGTY 92

Query: 314 EILTAFYKDGREDEYVYVAEALLAGIVGGATEAVVSTPFELLKRRGQVSSTVKSRSMGAA 493
           E+LTAFYKDGRED YVY +EA+LAGI  GA EAV  TPFEL K R QVSS + S+ MG A
Sbjct: 93  ELLTAFYKDGREDNYVYYSEAMLAGIAAGAGEAVFCTPFELFKLRNQVSSVIPSKVMGPA 152

Query: 494 TKSLSELVPVAWKLLPTYNPDQKMWNQTLSLLTTLPKKHSNMAVALKQYPWLLTGSGRPP 673
             +  E  P+  KLLP Y PD ++WN T+SLL+ L  KH +M  ALKQ+PW+LTG G+PP
Sbjct: 153 NVA-QESFPLLSKLLPGYVPDLRVWNNTVSLLSDLSPKHPDMLGALKQHPWMLTGCGKPP 211

Query: 674 LASEVKRPSDIISLEGWQALWRGLRPGIVRDCVFGGIFFSTWQFIHIGMLNWKALDIDPP 853
           L S+V  PS +I LEGW ALWRGLR GI RDCV+GGIFFSTWQF+H  ML WKA+++ P 
Sbjct: 212 LPSDVHLPSRVILLEGWGALWRGLRSGIARDCVYGGIFFSTWQFLHSAMLTWKAVNMSPE 271

Query: 854 P 856
           P
Sbjct: 272 P 272



 Score =  129 bits (323), Expect(2) = e-103
 Identities = 62/102 (60%), Positives = 70/102 (68%)
 Frame = +1

Query: 937  GPVSPXXXXXXXXXXXXXXXXXXHTLDTAKCRSQCIVIPKYIAMERKLLRWKAPGNWIER 1116
            GPV P                  HT DTAK RS+C V+PKYIAMERK L+WK PG WIER
Sbjct: 279  GPVPPFASSVAAGFAGVVAAAASHTFDTAKSRSECTVVPKYIAMERKFLKWKPPGTWIER 338

Query: 1117 VTGTSPADRNILFRGIWLRMARSGLASFAVVGSYLFAVDHFV 1242
             TG SPADRN+LFRGI LRMARSG+ASF +VGSY  AV+H +
Sbjct: 339  KTGISPADRNVLFRGIGLRMARSGIASFVLVGSYYLAVNHLL 380


>emb|CAE05654.2| OSJNBa0038O10.20 [Oryza sativa Japonica Group]
           gi|116310969|emb|CAH67905.1| OSIGBa0115K01-H0319F09.11
           [Oryza sativa Indica Group]
          Length = 377

 Score =  270 bits (691), Expect(2) = e-103
 Identities = 140/270 (51%), Positives = 179/270 (66%), Gaps = 1/270 (0%)
 Frame = +2

Query: 50  VGALLSESMFXXXXXXXXXXXXXXXXXXXPLDTLKTLLQVSA-GSGQKLSFFQVVDRVRS 226
           +G  L +S+F                   PLDT+KTLLQ+SA GS QK+   QVVDR+ S
Sbjct: 1   MGKPLGDSVFAGHAAAGVAAITASAVAVHPLDTVKTLLQLSATGSQQKMGLGQVVDRLMS 60

Query: 227 VSGLSGLYNXXXXXXXXXXXXXXARFGVFEILTAFYKDGREDEYVYVAEALLAGIVGGAT 406
            SG +GLY+              ARFG +E+LTAFYKDG+ED YV  +EA+LAGI  GA 
Sbjct: 61  ASGPAGLYSGIGWSVLGKLPGLGARFGTYELLTAFYKDGKEDNYVSYSEAMLAGIAAGAV 120

Query: 407 EAVVSTPFELLKRRGQVSSTVKSRSMGAATKSLSELVPVAWKLLPTYNPDQKMWNQTLSL 586
           E+V+ TPFELLK R QV S    ++   A  +     P+  KLLP Y PD ++WN ++SL
Sbjct: 121 ESVLCTPFELLKLRSQVGSVKPMKATDPANIT-KVAFPLLSKLLPGYVPDIRVWNSSVSL 179

Query: 587 LTTLPKKHSNMAVALKQYPWLLTGSGRPPLASEVKRPSDIISLEGWQALWRGLRPGIVRD 766
           L+ L  KH +M  ALKQ+PW+LTGSG+PPL S+V+ PS +I+LEGW ALWRGLRPG+ RD
Sbjct: 180 LSNLSPKHPDMMGALKQHPWMLTGSGKPPLPSDVQVPSRVIALEGWGALWRGLRPGMTRD 239

Query: 767 CVFGGIFFSTWQFIHIGMLNWKALDIDPPP 856
           CVFGG+FFSTWQFIH  ML W A++++P P
Sbjct: 240 CVFGGMFFSTWQFIHTAMLTWSAVNMNPQP 269



 Score =  132 bits (332), Expect(2) = e-103
 Identities = 64/102 (62%), Positives = 71/102 (69%)
 Frame = +1

Query: 937  GPVSPXXXXXXXXXXXXXXXXXXHTLDTAKCRSQCIVIPKYIAMERKLLRWKAPGNWIER 1116
            GPVSP                  HT DTAK RS+C VIPKYIAMER+LL+WK PGNWIER
Sbjct: 276  GPVSPFASSLAAGFSGVVAAAASHTFDTAKSRSECTVIPKYIAMERRLLKWKVPGNWIER 335

Query: 1117 VTGTSPADRNILFRGIWLRMARSGLASFAVVGSYLFAVDHFV 1242
             TG SPADRN+LFRGI  RMARSG ASF +VGSY F +D F+
Sbjct: 336  KTGISPADRNVLFRGIGQRMARSGFASFLLVGSYYFVIDQFL 377


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