BLASTX nr result

ID: Dioscorea21_contig00014637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014637
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066444.1| Os12g0230600 [Oryza sativa Japonica Group] g...   182   2e-44
ref|XP_002309816.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44
ref|XP_002264307.2| PREDICTED: uncharacterized protein LOC100261...   179   2e-43
ref|NP_850394.1| uncharacterized protein [Arabidopsis thaliana] ...   178   6e-43
ref|XP_002892311.1| hypothetical protein ARALYDRAFT_470598 [Arab...   177   7e-43

>ref|NP_001066444.1| Os12g0230600 [Oryza sativa Japonica Group]
           gi|77553516|gb|ABA96312.1| expressed protein [Oryza
           sativa Japonica Group] gi|113648951|dbj|BAF29463.1|
           Os12g0230600 [Oryza sativa Japonica Group]
           gi|215704198|dbj|BAG93038.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 215

 Score =  182 bits (463), Expect = 2e-44
 Identities = 92/142 (64%), Positives = 103/142 (72%), Gaps = 6/142 (4%)
 Frame = +1

Query: 1   WPRRSKSGVMLEGYVDES---VGLCLMPVGGETPAMGRTKSLTDEDLEELKGCLDLGFGF 171
           WPRR+K  V+ E         VG C    G E   +GR +SLTD+DLEELKGC+DLGFGF
Sbjct: 74  WPRRTKPVVVAEDEPPSGGVIVGACTAGGGEEGGGVGRARSLTDDDLEELKGCVDLGFGF 133

Query: 172 SYDGIPELCGTLPALELCYSLSQRFLDEQHQHHSHEVAHEPPSP---LANWKISSPGDHP 342
           SYD IPELCGTLPALELCYS+SQRFLD+  Q H       PP P   + NWKISSPGD P
Sbjct: 134 SYDEIPELCGTLPALELCYSMSQRFLDDHPQSHHSPPPPPPPMPSPSIPNWKISSPGDSP 193

Query: 343 EDVKARLKYWAQAVACTVRLCS 408
           ++VKARLKYWAQAVACTVRLCS
Sbjct: 194 DEVKARLKYWAQAVACTVRLCS 215


>ref|XP_002309816.1| predicted protein [Populus trichocarpa] gi|222852719|gb|EEE90266.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  181 bits (459), Expect = 6e-44
 Identities = 95/138 (68%), Positives = 105/138 (76%), Gaps = 4/138 (2%)
 Frame = +1

Query: 7   RRSKSGVMLEGYVDESVGLCLMPVGGETPAMGRTKSLTDEDLEELKGCLDLGFGFSYDGI 186
           +R KS V+LEGYV+ S         G    + RTKSLTD+DL+ELKGCLDLGFGFSYD I
Sbjct: 68  QRKKSQVLLEGYVEGSSS-------GSEDELKRTKSLTDDDLDELKGCLDLGFGFSYDEI 120

Query: 187 PELCGTLPALELCYSLSQRFLDEQH---QHHSHEVAHEP-PSPLANWKISSPGDHPEDVK 354
           PELC TLPALELCYS+SQ+FLDE     +  S  VA     SP+ANWKISSPGDHPEDVK
Sbjct: 121 PELCNTLPALELCYSMSQKFLDEHQKSPEGSSPAVAEAANSSPIANWKISSPGDHPEDVK 180

Query: 355 ARLKYWAQAVACTVRLCS 408
           ARLKYWAQAVACTVRLCS
Sbjct: 181 ARLKYWAQAVACTVRLCS 198


>ref|XP_002264307.2| PREDICTED: uncharacterized protein LOC100261066 isoform 1 [Vitis
           vinifera] gi|359478114|ref|XP_003632071.1| PREDICTED:
           uncharacterized protein LOC100261066 isoform 2 [Vitis
           vinifera]
          Length = 185

 Score =  179 bits (454), Expect = 2e-43
 Identities = 90/135 (66%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
 Frame = +1

Query: 7   RRSKSGVMLEGYVDESVGLCLMPVGGETPAMGRTKSLTDEDLEELKGCLDLGFGFSYDGI 186
           ++ K  V+LEGYV+ +    LM          RTKSLTDEDL+ELKGCLDLGFGFSY+ I
Sbjct: 61  QKKKKQVLLEGYVETADEDDLM----------RTKSLTDEDLDELKGCLDLGFGFSYEEI 110

Query: 187 PELCGTLPALELCYSLSQRFLDEQHQ-HHSHEVAHEPPSPLANWKISSPGDHPEDVKARL 363
           PELC TLPALELCYS+SQ+F+D+Q +   S   A E P P+ANWKISSPGDHPE+VKARL
Sbjct: 111 PELCNTLPALELCYSMSQKFMDDQQKAPESSPAASESPGPIANWKISSPGDHPEEVKARL 170

Query: 364 KYWAQAVACTVRLCS 408
           K+WAQAVACTVRLCS
Sbjct: 171 KFWAQAVACTVRLCS 185


>ref|NP_850394.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13877691|gb|AAK43923.1|AF370604_1 Unknown protein
           [Arabidopsis thaliana] gi|107738118|gb|ABF83640.1|
           At2g43340 [Arabidopsis thaliana]
           gi|110743935|dbj|BAE99801.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255159|gb|AEC10253.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 189

 Score =  178 bits (451), Expect = 6e-43
 Identities = 87/140 (62%), Positives = 105/140 (75%), Gaps = 7/140 (5%)
 Frame = +1

Query: 10  RSKSGVMLEGYVDESVGLCLMPVGGETPAMGRTKSLTDEDLEELKGCLDLGFGFSYDGIP 189
           + KS V+LEGYV +S              + RTKSLTD+DLEELKGC+DLGFGF+Y+ IP
Sbjct: 59  KKKSNVLLEGYVVDSA---------VNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIP 109

Query: 190 ELCGTLPALELCYSLSQRFLDEQHQHHS-------HEVAHEPPSPLANWKISSPGDHPED 348
           ELC TLPALELCYS+SQ+F+D+ H HHS         V   P SP+A+WKISSPGD+P+D
Sbjct: 110 ELCNTLPALELCYSMSQKFIDQDHHHHSSSSPEKKSSVLDSPVSPIASWKISSPGDNPDD 169

Query: 349 VKARLKYWAQAVACTVRLCS 408
           VKARLK+WAQAVACTVRLC+
Sbjct: 170 VKARLKFWAQAVACTVRLCT 189


>ref|XP_002892311.1| hypothetical protein ARALYDRAFT_470598 [Arabidopsis lyrata subsp.
           lyrata] gi|297338153|gb|EFH68570.1| hypothetical protein
           ARALYDRAFT_470598 [Arabidopsis lyrata subsp. lyrata]
          Length = 187

 Score =  177 bits (450), Expect = 7e-43
 Identities = 88/140 (62%), Positives = 106/140 (75%), Gaps = 7/140 (5%)
 Frame = +1

Query: 10  RSKSGVMLEGYVDESVGLCLMPVGGETPAMGRTKSLTDEDLEELKGCLDLGFGFSYDGIP 189
           R KS V+LEGYV+ +       V  +   + R+KSLTD+DLE+LKGCLDLGFGFSYD IP
Sbjct: 54  RKKSQVLLEGYVETAA------VDDQKDDLTRSKSLTDDDLEDLKGCLDLGFGFSYDEIP 107

Query: 190 ELCGTLPALELCYSLSQRFLDEQHQHHSHEVAHEPPS-------PLANWKISSPGDHPED 348
           ELC TLPALELCYS+SQ+FLD++H+        + PS       P+ANWKISSPGD+P+D
Sbjct: 108 ELCNTLPALELCYSMSQKFLDDKHKSPESSSVEDSPSPSPVTSTPIANWKISSPGDNPDD 167

Query: 349 VKARLKYWAQAVACTVRLCS 408
           VKARLKYWAQAVACTV+LCS
Sbjct: 168 VKARLKYWAQAVACTVQLCS 187


Top