BLASTX nr result

ID: Dioscorea21_contig00014583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014583
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ25510.1| hypothetical protein OsJ_09334 [Oryza sativa Japo...    87   4e-15
ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group] g...    87   4e-15
gb|ABF93875.1| RNA recognition motif family protein, expressed [...    87   4e-15
gb|ABF93874.1| RNA recognition motif family protein, expressed [...    87   4e-15
gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indi...    85   2e-14

>gb|EAZ25510.1| hypothetical protein OsJ_09334 [Oryza sativa Japonica Group]
          Length = 942

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +1

Query: 19   DAEDKPDMGNENGKETPVEDANT-KAIIVKKTEVGDQQAQNLKLFEAGCVLVEYLREEAA 195
            D  DK    NE      V ++NT KA  V   +  +  A N    EAGC+LVE+LR+EAA
Sbjct: 852  DGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEFLRKEAA 909

Query: 196  CKAAHCLHGRSYGEQVIAAGYVPHDLYLLQFPR 294
            C AAH LHGR +G ++++AGY PHDLYL ++PR
Sbjct: 910  CIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 942


>ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group]
           gi|113547378|dbj|BAF10821.1| Os03g0138100 [Oryza sativa
           Japonica Group]
          Length = 404

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +1

Query: 19  DAEDKPDMGNENGKETPVEDANT-KAIIVKKTEVGDQQAQNLKLFEAGCVLVEYLREEAA 195
           D  DK    NE      V ++NT KA  V   +  +  A N    EAGC+LVE+LR+EAA
Sbjct: 314 DGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEFLRKEAA 371

Query: 196 CKAAHCLHGRSYGEQVIAAGYVPHDLYLLQFPR 294
           C AAH LHGR +G ++++AGY PHDLYL ++PR
Sbjct: 372 CIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 404


>gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 964

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +1

Query: 19   DAEDKPDMGNENGKETPVEDANT-KAIIVKKTEVGDQQAQNLKLFEAGCVLVEYLREEAA 195
            D  DK    NE      V ++NT KA  V   +  +  A N    EAGC+LVE+LR+EAA
Sbjct: 874  DGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEFLRKEAA 931

Query: 196  CKAAHCLHGRSYGEQVIAAGYVPHDLYLLQFPR 294
            C AAH LHGR +G ++++AGY PHDLYL ++PR
Sbjct: 932  CIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964


>gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 964

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +1

Query: 19   DAEDKPDMGNENGKETPVEDANT-KAIIVKKTEVGDQQAQNLKLFEAGCVLVEYLREEAA 195
            D  DK    NE      V ++NT KA  V   +  +  A N    EAGC+LVE+LR+EAA
Sbjct: 874  DGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEFLRKEAA 931

Query: 196  CKAAHCLHGRSYGEQVIAAGYVPHDLYLLQFPR 294
            C AAH LHGR +G ++++AGY PHDLYL ++PR
Sbjct: 932  CIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964


>gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
          Length = 1128

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
 Frame = +1

Query: 19   DAEDKPDMGNENGKETPVEDANT-KAIIVKKTEVGDQQAQNLKLFEAGCVLVEYLREEAA 195
            D  DK    NE      V ++NT KA  V   +  +  A N    EAGC+LVE+LR+EAA
Sbjct: 1038 DGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEFLRKEAA 1095

Query: 196  CKAAHCLHGRSYGEQVIAAGYVPHDLYLLQFPR 294
            C AAH LHGR +G ++++AGY PHDLYL ++ R
Sbjct: 1096 CTAAHSLHGRRFGSRIVSAGYAPHDLYLQKYTR 1128


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