BLASTX nr result

ID: Dioscorea21_contig00014578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014578
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269385.1| PREDICTED: tubulin-specific chaperone C-like...   154   1e-35
ref|XP_003634829.1| PREDICTED: tubulin-specific chaperone C-like...   149   4e-34
ref|XP_002866894.1| hypothetical protein ARALYDRAFT_912482 [Arab...   139   6e-31
ref|NP_195702.1| C-CAP/cofactor C-like domain-containing protein...   137   1e-30
gb|AAM22959.1|AF486850_1 tubulin folding cofactor C [Arabidopsis...   135   8e-30

>ref|XP_002269385.1| PREDICTED: tubulin-specific chaperone C-like [Vitis vinifera]
          Length = 351

 Score =  154 bits (389), Expect = 1e-35
 Identities = 90/191 (47%), Positives = 126/191 (65%), Gaps = 4/191 (2%)
 Frame = +2

Query: 74  NPNPVAYDALEKKHALMLERLENLRQARKTES---GSGSEAAPSFESVASFLSRFSDAKR 244
           NPN     A +KKHA ML RL NL+Q R  +S    S S + PSFES  SFL+RFSD+KR
Sbjct: 9   NPNQALDSATQKKHASMLARLSNLQQTRLQQSLARKSDSVSGPSFESTQSFLTRFSDSKR 68

Query: 245 SIDAELSRLRVL-DPSAKPDVKLQLEALSAMIADLERLVAENSYFLPSYDVRSSLKSISD 421
           SI+++L+  R+  DP  + D    L+ +S  IADLE+LVAENSY+LPSY++RS+LKS+S+
Sbjct: 69  SIESQLAGARLTSDPQRRSD----LQQISTSIADLEKLVAENSYYLPSYEIRSALKSVSE 124

Query: 422 LKESLDALSAELVPRXXXXXXXXXXXXXQSVLSKEKEEFRVLDEERSDLGGVRESPGFRN 601
           LK++LD L++EL+P+              S   +EK EF   D +   +  + ++PGFRN
Sbjct: 125 LKQTLDNLNSELLPKKKFSFRNKGTKKEPSNAPEEK-EFGNADLQPKLVFSIPDTPGFRN 183

Query: 602 KKGDVLVKQFR 634
           K+G++LVK FR
Sbjct: 184 KEGELLVKDFR 194


>ref|XP_003634829.1| PREDICTED: tubulin-specific chaperone C-like [Vitis vinifera]
          Length = 351

 Score =  149 bits (376), Expect = 4e-34
 Identities = 87/183 (47%), Positives = 123/183 (67%), Gaps = 4/183 (2%)
 Frame = +2

Query: 98  ALEKKHALMLERLENLRQARKTES---GSGSEAAPSFESVASFLSRFSDAKRSIDAELSR 268
           A +KKHA MLERL NL+Q R  +S    S S + PSFES  SFL+RFSD+ RSI+++L+ 
Sbjct: 17  ATQKKHASMLERLSNLQQTRLQQSLARKSDSVSGPSFESTQSFLTRFSDSNRSIESQLAG 76

Query: 269 LRVL-DPSAKPDVKLQLEALSAMIADLERLVAENSYFLPSYDVRSSLKSISDLKESLDAL 445
            R+  DP  + D    L+ +S  IADLE+LVAENSY+LPSY++RS+LKS+S+LK++LD L
Sbjct: 77  ARLTCDPQRRSD----LQQISTSIADLEKLVAENSYYLPSYEIRSALKSVSELKQTLDNL 132

Query: 446 SAELVPRXXXXXXXXXXXXXQSVLSKEKEEFRVLDEERSDLGGVRESPGFRNKKGDVLVK 625
           ++EL+P+              S   +EK EF   D +   +  + ++PGFRNK+G++LVK
Sbjct: 133 NSELLPKKKFSFRNKGTKREPSNAPEEK-EFGNADLQPKLVFSIPDTPGFRNKEGELLVK 191

Query: 626 QFR 634
            FR
Sbjct: 192 DFR 194


>ref|XP_002866894.1| hypothetical protein ARALYDRAFT_912482 [Arabidopsis lyrata subsp.
           lyrata] gi|297312730|gb|EFH43153.1| hypothetical protein
           ARALYDRAFT_912482 [Arabidopsis lyrata subsp. lyrata]
          Length = 350

 Score =  139 bits (349), Expect = 6e-31
 Identities = 86/188 (45%), Positives = 121/188 (64%), Gaps = 9/188 (4%)
 Frame = +2

Query: 98  ALEKKHALMLERLENLRQARKTES--GSGSEAAPSFESVASFLSRFSDAKRSIDAELSRL 271
           AL+KKH  MLERL    QARK++S   S S ++ + ES +SFL++FSD+KRSI++ ++  
Sbjct: 16  ALQKKHHDMLERLSARHQARKSDSPDASSSSSSSTLESTSSFLAKFSDSKRSIESRIAES 75

Query: 272 RVLDPSAKPD-VKLQLEALSAMIADLERLVAENSYFLPSYDVRSSLKSISDLKESLDALS 448
           R++  S     +K  L  +S  I +LE+L+AENSYFLPSY+VRSSLK +SDLK+SLD LS
Sbjct: 76  RLVSSSTDSSKLKSDLAEISVAINNLEKLLAENSYFLPSYEVRSSLKIVSDLKQSLDILS 135

Query: 449 AELVPRXXXXXXXXXXXXXQSVLSKEKEEFRVLDEERSD------LGGVRESPGFRNKKG 610
            ELVP+             +S  + +K E ++ + ++SD      L  VR+SPG RNK G
Sbjct: 136 GELVPK--------KKFSFKSKSTTKKPESKLPEIQKSDAVLPPKLLPVRDSPGLRNKHG 187

Query: 611 DVLVKQFR 634
             LVK F+
Sbjct: 188 VTLVKSFK 195


>ref|NP_195702.1| C-CAP/cofactor C-like domain-containing protein [Arabidopsis
           thaliana] gi|75206810|sp|Q9SMR2.1|TBCC_ARATH RecName:
           Full=Tubulin-folding cofactor C; Short=TFC C; AltName:
           Full=Protein PORCINO gi|4490743|emb|CAB38905.1| putative
           protein [Arabidopsis thaliana]
           gi|7271047|emb|CAB80655.1| putative protein [Arabidopsis
           thaliana] gi|89000967|gb|ABD59073.1| At4g39920
           [Arabidopsis thaliana] gi|332661738|gb|AEE87138.1|
           C-CAP/cofactor C-like domain-containing protein
           [Arabidopsis thaliana]
          Length = 345

 Score =  137 bits (346), Expect = 1e-30
 Identities = 85/186 (45%), Positives = 119/186 (63%), Gaps = 8/186 (4%)
 Frame = +2

Query: 98  ALEKKHALMLERLENLRQARKTES-GSGSEAAPSFESVASFLSRFSDAKRSIDAELSRLR 274
           AL+KKH  MLERL    QARK++S  S S ++ + ES +SFL++FSD+KRSI++ ++  R
Sbjct: 16  ALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSFLAKFSDSKRSIESRIAESR 75

Query: 275 VLDPSAKPD-VKLQLEALSAMIADLERLVAENSYFLPSYDVRSSLKSISDLKESLDALSA 451
           +   S     +K  L  +S  I +LE+L+AENSYFLPSY+VRSSLK +SDLK+SLD LS 
Sbjct: 76  LASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEVRSSLKIVSDLKQSLDILSG 135

Query: 452 ELVPRXXXXXXXXXXXXXQSVLSKEKEEFRVLDEERSD------LGGVRESPGFRNKKGD 613
           ELVP+             +S  + +K E ++ + ++ D      L  VR+SPG RNK G+
Sbjct: 136 ELVPK--------KKFSFKSKSTTKKPESKLPEIQKPDVVLPPKLVPVRDSPGLRNKHGE 187

Query: 614 VLVKQF 631
            LVK F
Sbjct: 188 TLVKSF 193


>gb|AAM22959.1|AF486850_1 tubulin folding cofactor C [Arabidopsis thaliana]
          Length = 340

 Score =  135 bits (339), Expect = 8e-30
 Identities = 85/181 (46%), Positives = 115/181 (63%), Gaps = 3/181 (1%)
 Frame = +2

Query: 98  ALEKKHALMLERLENLRQARKTES-GSGSEAAPSFESVASFLSRFSDAKRSIDAELSRLR 274
           AL+KKH  MLERL    QARK++S  S S ++ + ES +SFL++FSD+KRSI++ ++  R
Sbjct: 16  ALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSFLAKFSDSKRSIESRIAESR 75

Query: 275 VLDPSAKPD-VKLQLEALSAMIADLERLVAENSYFLPSYDVRSSLKSISDLKESLDALSA 451
           +   S     +K  L  +S  I +LE+L+AENSYFLPSY+VRSSLK +SDLK+SLD LS 
Sbjct: 76  LASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEVRSSLKIVSDLKQSLDILSG 135

Query: 452 ELVPRXXXXXXXXXXXXXQSVLSKEKEEFRVLDEE-RSDLGGVRESPGFRNKKGDVLVKQ 628
           ELVP+             +S  + +K E +  D      L  VR+SPG RNK G+ LVK 
Sbjct: 136 ELVPK--------KKFSFKSKSTTKKPEIQKPDVVLPPKLVPVRDSPGLRNKHGETLVKS 187

Query: 629 F 631
           F
Sbjct: 188 F 188


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