BLASTX nr result

ID: Dioscorea21_contig00014561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014561
         (1403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468055.1| hypothetical protein SORBIDRAFT_01g038780 [S...   605   e-171
ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|2...   605   e-171
ref|XP_002525197.1| meiotic recombination protein spo11, putativ...   601   e-169
ref|XP_003561743.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   598   e-168
gb|ACG43435.1| RHL2 [Zea mays]                                        597   e-168

>ref|XP_002468055.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
            gi|241921909|gb|EER95053.1| hypothetical protein
            SORBIDRAFT_01g038780 [Sorghum bicolor]
          Length = 436

 Score =  605 bits (1561), Expect = e-171
 Identities = 313/436 (71%), Positives = 356/436 (81%), Gaps = 12/436 (2%)
 Frame = +3

Query: 9    MSEKKRRW-------PEPGTXXXXXXXXXHAHELKNQLKPDTEILSSLHRLRAATQSCSD 167
            MSEKKRR                      +A  L+++L+PD  IL++L  L +A+ S S 
Sbjct: 1    MSEKKRRAGASAVGAASSSKKPRASAAASYAESLRSKLRPDASILATLRSLASASASKSK 60

Query: 168  QTL-TLSDLNLS----SPFREVSDLDSSSVXXXXXXXXXXXXXXXXXGNGFXXXXXXXXX 332
             T  +L+DL+LS    S +  V+D DS+SV                 G GF         
Sbjct: 61   ATSKSLADLDLSADPASSYIVVADQDSASVTSRINRLVLAAARSILSGRGFSFAVPSRAA 120

Query: 333  XNQLYLPELDRIVLKDKTSSRPFASLSTVRKATITARVLSLVHAILLNGIHVTKRDLFYT 512
             NQ+YLP+LDRIVL  + S+RPFA+++T RKATITARVLSLVHA+L  GIHVTKRDLFYT
Sbjct: 121  SNQVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLGRGIHVTKRDLFYT 180

Query: 513  DVKLFGDQTQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFSDDGDRIDCTRMGIG 692
            DVKLFGDQ+QSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVF+DDGDRIDCTRMG+G
Sbjct: 181  DVKLFGDQSQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFADDGDRIDCTRMGVG 240

Query: 693  GKAIPPNIDRVSDLESDALFILLVEKDAAFMRLAEDRFYNRFPCIIVTAKGQPDVATRLF 872
            GKAIPPN+DRVS +ESDALFILLVEKDAAFMRLAEDRFYNRFPCII+TAKGQPDVATRLF
Sbjct: 241  GKAIPPNVDRVSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLF 300

Query: 873  LKKMKTELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSSNLTTPDIKWLGIRPSDLDK 1052
            L+++K ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDS+NLTTPDIKWLG+RPSDLDK
Sbjct: 301  LRRLKVELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDK 360

Query: 1053 YRVPEQCRLPMTDQDVKVGKDLLEEDFVKRNEGWVRELEMMVRTRQKAEIQALSSFGFQY 1232
            YRVPEQCRLPMTD D+KVGK+LLEEDFVK+NEGWV+ELEMM+RT+QKAEIQALSSFGFQY
Sbjct: 361  YRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELEMMLRTKQKAEIQALSSFGFQY 420

Query: 1233 LTEVYLPLKIQQQDWL 1280
            LTEVYLPLK+Q+QDW+
Sbjct: 421  LTEVYLPLKLQEQDWI 436


>ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|222833522|gb|EEE71999.1|
            predicted protein [Populus trichocarpa]
          Length = 423

 Score =  605 bits (1561), Expect = e-171
 Identities = 308/427 (72%), Positives = 349/427 (81%), Gaps = 1/427 (0%)
 Frame = +3

Query: 3    TTMSEKKRRWPEPGTXXXXXXXXXHAHELKNQLKPDTEILSSLHRLRAATQSCSD-QTLT 179
            T+   +KRR P+P +              KN LKPD+ IL +L  L  +T S S  + LT
Sbjct: 5    TSTKSRKRRQPDPDSTTELL--------FKNLLKPDSVILQTLQSLVISTASASSSKPLT 56

Query: 180  LSDLNLSSPFREVSDLDSSSVXXXXXXXXXXXXXXXXXGNGFXXXXXXXXXXNQLYLPEL 359
            LSDL+LSS  REV+DL  +SV                 G GF          NQLY+PEL
Sbjct: 57   LSDLSLSSSCREVADLSLTSVQSEIEALTISIVQSILSGKGFSFNVPSRSATNQLYVPEL 116

Query: 360  DRIVLKDKTSSRPFASLSTVRKATITARVLSLVHAILLNGIHVTKRDLFYTDVKLFGDQT 539
            DRIVLKDK + RPFA++S+VRK TITAR+LSL+H + L  IHVTKRDLFYTDVKLF DQT
Sbjct: 117  DRIVLKDKNTLRPFANISSVRKCTITARILSLIHQLCLKSIHVTKRDLFYTDVKLFQDQT 176

Query: 540  QSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFSDDGDRIDCTRMGIGGKAIPPNID 719
            QSDAVLDDVSCMLGCTRSSL+V+A+EKGVVVGRL+FSD+GD IDCT+MG+GGKAIPPNID
Sbjct: 177  QSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNID 236

Query: 720  RVSDLESDALFILLVEKDAAFMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLKKMKTELK 899
            RV D++SDALFILLVEKDAA+MRLAEDRFYNRFPCIIVTAKGQPDVATRLFL+KMKTELK
Sbjct: 237  RVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELK 296

Query: 900  LPVLALVDSDPYGLKILSVYMCGSKNMSYDSSNLTTPDIKWLGIRPSDLDKYRVPEQCRL 1079
            LPVLALVDSDPYGLKILSVY CGSKNMSYDS+NLTTPDIKWLGIRPSDLDKY++PEQCRL
Sbjct: 297  LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 356

Query: 1080 PMTDQDVKVGKDLLEEDFVKRNEGWVRELEMMVRTRQKAEIQALSSFGFQYLTEVYLPLK 1259
            PMT+QD+K GKDLLEEDFVK+N GWV EL +MV+T+QKAEIQALSSFGFQYL+EVYLPLK
Sbjct: 357  PMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLK 416

Query: 1260 IQQQDWL 1280
            +QQQDWL
Sbjct: 417  LQQQDWL 423


>ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
            gi|223535494|gb|EEF37163.1| meiotic recombination protein
            spo11, putative [Ricinus communis]
          Length = 421

 Score =  601 bits (1550), Expect = e-169
 Identities = 309/427 (72%), Positives = 348/427 (81%), Gaps = 1/427 (0%)
 Frame = +3

Query: 3    TTMSEKKRRWPEPGTXXXXXXXXXHAHELKNQLKPDTEILSSLHRLRAATQSCSD-QTLT 179
            TT S+K+RR     T              KN LKPD+ IL +L+ L  +T S S  + LT
Sbjct: 4    TTKSKKRRRADPESTTELP---------FKNSLKPDSVILETLNSLLQSTSSSSSSKPLT 54

Query: 180  LSDLNLSSPFREVSDLDSSSVXXXXXXXXXXXXXXXXXGNGFXXXXXXXXXXNQLYLPEL 359
            LSDL+LS+  REV+DL  SSV                 G GF          NQLY+PEL
Sbjct: 55   LSDLSLSATCREVTDLSLSSVQSVIETVVLSLTQSILSGEGFSFNVPSRAATNQLYVPEL 114

Query: 360  DRIVLKDKTSSRPFASLSTVRKATITARVLSLVHAILLNGIHVTKRDLFYTDVKLFGDQT 539
            DRIVLKDK + RPFA +S+VRK+TITA++LSLVH + L  IHVTKRDLFYTDVKLF DQT
Sbjct: 115  DRIVLKDKNTLRPFAHISSVRKSTITAKILSLVHQLCLKNIHVTKRDLFYTDVKLFQDQT 174

Query: 540  QSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFSDDGDRIDCTRMGIGGKAIPPNID 719
            QSDAVLDDVSCMLGCTRSSL+VVA+EKGVVVGRL+FSD+GD IDCT+MG+GGKAIPPNID
Sbjct: 175  QSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNID 234

Query: 720  RVSDLESDALFILLVEKDAAFMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLKKMKTELK 899
            RV D++SDALFILLVEKDAA+MRLAEDRFYNRFPCIIVTAKGQPDVATRLFL+KMK ELK
Sbjct: 235  RVDDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK 294

Query: 900  LPVLALVDSDPYGLKILSVYMCGSKNMSYDSSNLTTPDIKWLGIRPSDLDKYRVPEQCRL 1079
            LPVLALVDSDPYGLKILSVY CGSKNMSYDS+NLTTPDIKWLGIRPSDLDKY++PEQCRL
Sbjct: 295  LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 354

Query: 1080 PMTDQDVKVGKDLLEEDFVKRNEGWVRELEMMVRTRQKAEIQALSSFGFQYLTEVYLPLK 1259
            PMT+QD+K GKDLLEEDFVK+N GWV EL +MV+T+QKAEIQALSSFGFQYL+EVYLPLK
Sbjct: 355  PMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLK 414

Query: 1260 IQQQDWL 1280
            +QQQDWL
Sbjct: 415  LQQQDWL 421


>ref|XP_003561743.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Brachypodium
            distachyon]
          Length = 464

 Score =  598 bits (1541), Expect = e-168
 Identities = 302/411 (73%), Positives = 343/411 (83%), Gaps = 9/411 (2%)
 Frame = +3

Query: 75   HAHELKNQLKPDTEILSSLHRLRAA--------TQSCSDQTLTLSD-LNLSSPFREVSDL 227
            +A  L+++L+PD  IL+SL  L +A        T S + + LT  D  + +S +  V+D 
Sbjct: 54   YAESLRSKLRPDASILASLRALASASSKSKPAGTSSAAAKALTADDPTSANSSYIVVADQ 113

Query: 228  DSSSVXXXXXXXXXXXXXXXXXGNGFXXXXXXXXXXNQLYLPELDRIVLKDKTSSRPFAS 407
            D +SV                 G GF          NQ+YLPELDRIVL  + S+RPFAS
Sbjct: 114  DITSVTSRINRLVLSVARSILEGRGFSFSVPSRTSTNQVYLPELDRIVLLRRESARPFAS 173

Query: 408  LSTVRKATITARVLSLVHAILLNGIHVTKRDLFYTDVKLFGDQTQSDAVLDDVSCMLGCT 587
            + T RKAT+TARVLSLVHA+L  GIHVTKRDLFYTDVKLFGDQ+QSDAVLDDVSCMLGCT
Sbjct: 174  VGTARKATVTARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQSQSDAVLDDVSCMLGCT 233

Query: 588  RSSLHVVASEKGVVVGRLVFSDDGDRIDCTRMGIGGKAIPPNIDRVSDLESDALFILLVE 767
            RSSLHVVASEKGVVVGRL+F+DDGDRIDCTRMG+GGKAIPPNIDRVS +ESDALFILLVE
Sbjct: 234  RSSLHVVASEKGVVVGRLIFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVE 293

Query: 768  KDAAFMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLKKMKTELKLPVLALVDSDPYGLKI 947
            KDAAFMRLAEDRFYNRFPCII+TAKGQPDVATRLFL+++K ELKLPVLALVDSDPYGLKI
Sbjct: 294  KDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKI 353

Query: 948  LSVYMCGSKNMSYDSSNLTTPDIKWLGIRPSDLDKYRVPEQCRLPMTDQDVKVGKDLLEE 1127
            LSVYMCGSKNMSYDS+NLTTPDIKWLG+RPSDLDKYRVPEQCRLPMTD D+KVGK++LEE
Sbjct: 354  LSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDMKVGKEMLEE 413

Query: 1128 DFVKRNEGWVRELEMMVRTRQKAEIQALSSFGFQYLTEVYLPLKIQQQDWL 1280
            DFVK+NEGWV+ELE M+RT+QKAEIQALSSFGFQYLTEVYLPLK+QQ+DW+
Sbjct: 414  DFVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQQEDWI 464


>gb|ACG43435.1| RHL2 [Zea mays]
          Length = 436

 Score =  597 bits (1540), Expect = e-168
 Identities = 309/436 (70%), Positives = 352/436 (80%), Gaps = 12/436 (2%)
 Frame = +3

Query: 9    MSEKKRRW-------PEPGTXXXXXXXXXHAHELKNQLKPDTEILSSLHRLRAATQSCSD 167
            MSEKKRR                      +A  L+++L+PD  IL++L  L +A+ S S 
Sbjct: 1    MSEKKRRAGASAAGAASSSKKPRASSAASYAESLRSKLRPDASILATLRSLASASASKSK 60

Query: 168  -QTLTLSD----LNLSSPFREVSDLDSSSVXXXXXXXXXXXXXXXXXGNGFXXXXXXXXX 332
                +L+D     + +S +  V+D DS+SV                 G GF         
Sbjct: 61   ADARSLADHDPCADPASSYIVVADQDSTSVTSRINRLVLAAARSILSGRGFSFAVPSRAA 120

Query: 333  XNQLYLPELDRIVLKDKTSSRPFASLSTVRKATITARVLSLVHAILLNGIHVTKRDLFYT 512
             NQ+YLP+LDRIVL  + S+RPFA+++T RKATITARVLSLVHA+L  GIHVTKRDLFYT
Sbjct: 121  SNQVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLGRGIHVTKRDLFYT 180

Query: 513  DVKLFGDQTQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFSDDGDRIDCTRMGIG 692
            DVKLFGDQTQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVF+DDGDRIDCTRMG+G
Sbjct: 181  DVKLFGDQTQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFADDGDRIDCTRMGVG 240

Query: 693  GKAIPPNIDRVSDLESDALFILLVEKDAAFMRLAEDRFYNRFPCIIVTAKGQPDVATRLF 872
            GKAIPPN+DRVS +ESDALFILLVEKDAAFMRLAEDRFYNRFPCII+TAKGQPDVATRLF
Sbjct: 241  GKAIPPNVDRVSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLF 300

Query: 873  LKKMKTELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSSNLTTPDIKWLGIRPSDLDK 1052
            L+++K ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDS+NLTTPDIKWLG+RPSDLDK
Sbjct: 301  LRRLKVELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDK 360

Query: 1053 YRVPEQCRLPMTDQDVKVGKDLLEEDFVKRNEGWVRELEMMVRTRQKAEIQALSSFGFQY 1232
            YRVPEQCRLPMTD D+KVGK+LLEEDFVK+NEGWV+ELE M+RT+QKAEIQALSSFGFQY
Sbjct: 361  YRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRTKQKAEIQALSSFGFQY 420

Query: 1233 LTEVYLPLKIQQQDWL 1280
            LTEVYLPLK+Q+QDW+
Sbjct: 421  LTEVYLPLKLQEQDWI 436


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