BLASTX nr result

ID: Dioscorea21_contig00014534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014534
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             138   1e-30
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             136   6e-30
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             136   6e-30
ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 ...   130   4e-28
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   127   3e-27

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  138 bits (347), Expect = 1e-30
 Identities = 77/242 (31%), Positives = 130/242 (53%), Gaps = 1/242 (0%)
 Frame = +2

Query: 35   NHLMFADDLIIITNASRSAARNCKFCLDIYRDLTGQQANLAKSTIHLPSWCNSRIKTSIS 214
            +HL FADDL++   AS   A+    CLD + D +G + N +KS +   S  N+ +K +I 
Sbjct: 1213 SHLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIG 1272

Query: 215  SILGMHLGSFPFKYLGVLISPKRLTVYQWQYLVEKAATCVRSWNHSALSYAGRTVLINSA 394
            SIL + +      YLG+ +  +R++   +  +++K  T + SW  S+L+ AGR VL+ ++
Sbjct: 1273 SILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQAS 1332

Query: 395  LLSIPSYALSCCAVPDSVLDSISALARKFLWRPSSNGTGVHSVGWEVTTLDKSEGGLGVR 574
            L ++P+Y +   A+P S  + I    R FLW   +N   +HSV W      ++EGGLG+R
Sbjct: 1333 LATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 1392

Query: 575  HLRNVKISLMAKNLFAFLNNEDKVWIHLLHFKY-GNLHVWDPGKPKSMSWFFQKLRECAD 751
              R+   + + K  +   +N DK+W+ +L  KY  N          + SW ++ + +  D
Sbjct: 1393 MARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKD 1452

Query: 752  VL 757
            VL
Sbjct: 1453 VL 1454


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  136 bits (342), Expect = 6e-30
 Identities = 76/242 (31%), Positives = 130/242 (53%), Gaps = 1/242 (0%)
 Frame = +2

Query: 35   NHLMFADDLIIITNASRSAARNCKFCLDIYRDLTGQQANLAKSTIHLPSWCNSRIKTSIS 214
            +HL FADDL++   AS   A+    CLD + + +G + N +KS +   S  N+ +K +I 
Sbjct: 681  SHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIG 740

Query: 215  SILGMHLGSFPFKYLGVLISPKRLTVYQWQYLVEKAATCVRSWNHSALSYAGRTVLINSA 394
            SIL + +      YLG+ +  +R++   +  +++K  T + SW  S+L+ AGR VL+ ++
Sbjct: 741  SILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQAS 800

Query: 395  LLSIPSYALSCCAVPDSVLDSISALARKFLWRPSSNGTGVHSVGWEVTTLDKSEGGLGVR 574
            L ++P+Y +   A+P S  + I    R FLW   +N   +HSV W      ++EGGLG+R
Sbjct: 801  LATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 860

Query: 575  HLRNVKISLMAKNLFAFLNNEDKVWIHLLHFKY-GNLHVWDPGKPKSMSWFFQKLRECAD 751
              R+   + + K  +   +N DK+W+ +L  KY  N          + SW ++ + +  D
Sbjct: 861  MARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKD 920

Query: 752  VL 757
            VL
Sbjct: 921  VL 922


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  136 bits (342), Expect = 6e-30
 Identities = 76/242 (31%), Positives = 130/242 (53%), Gaps = 1/242 (0%)
 Frame = +2

Query: 35   NHLMFADDLIIITNASRSAARNCKFCLDIYRDLTGQQANLAKSTIHLPSWCNSRIKTSIS 214
            +HL FADDL++   AS   A+    CLD + + +G + N +KS +   S  N+ +K +I 
Sbjct: 681  SHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIG 740

Query: 215  SILGMHLGSFPFKYLGVLISPKRLTVYQWQYLVEKAATCVRSWNHSALSYAGRTVLINSA 394
            SIL + +      YLG+ +  +R++   +  +++K  T + SW  S+L+ AGR VL+ ++
Sbjct: 741  SILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQAS 800

Query: 395  LLSIPSYALSCCAVPDSVLDSISALARKFLWRPSSNGTGVHSVGWEVTTLDKSEGGLGVR 574
            L ++P+Y +   A+P S  + I    R FLW   +N   +HSV W      ++EGGLG+R
Sbjct: 801  LATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 860

Query: 575  HLRNVKISLMAKNLFAFLNNEDKVWIHLLHFKY-GNLHVWDPGKPKSMSWFFQKLRECAD 751
              R+   + + K  +   +N DK+W+ +L  KY  N          + SW ++ + +  D
Sbjct: 861  MARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKD 920

Query: 752  VL 757
            VL
Sbjct: 921  VL 922


>ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 [Sorghum bicolor]
            gi|241947177|gb|EES20322.1| hypothetical protein
            SORBIDRAFT_0015s007030 [Sorghum bicolor]
          Length = 933

 Score =  130 bits (326), Expect = 4e-28
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
 Frame = +2

Query: 11   DRRLEKNFNHLMFADDLIIITNASRSAARNCKFCLDIYRDLTGQQANLAKSTIHL----P 178
            D  +EK    L +ADD II    S   ARN K  L ++  + G + N  KS +       
Sbjct: 681  DHIIEKGVAVLQYADDTIICLKHSIEGARNLKMLLYMFELMAGLKINFLKSEVITINDED 740

Query: 179  SWCNSRIKTSISSILGMHLGSFPFKYLGVLISPKRLTVYQWQYLVEKAATCVRSWNHSAL 358
            +W         + I    +GSFPFKYLGV +SP R+ V  W  +VEKA   +  W  ++L
Sbjct: 741  NWAEV-----YAGIFNCQVGSFPFKYLGVPVSPSRIHVRDWLPIVEKAYRKLDVWKGNSL 795

Query: 359  SYAGRTVLINSALLSIPSYALSCCAVPDSVLDSISALARKFLWRPSSNGTGVHSVGWEVT 538
            S  GR  LI+S L + P Y +S   +P ++   +  + R F W+        H + W   
Sbjct: 796  SIPGRKTLIDSTLSNAPLYQISIYLLPKTITYKLDKIRRTFFWQGGDTKKKYHLIKWTKI 855

Query: 539  TLDKSEGGLGVRHLRNVKISLMAKNLFAFLNNEDKVWIHLLHFKY 673
               K +GGLG++ +R + ISL+ K L+  L  ED VW  +++FKY
Sbjct: 856  CKSKKKGGLGIKCIRKMNISLLCKWLWK-LETEDGVWQKIINFKY 899


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score =  127 bits (319), Expect = 3e-27
 Identities = 65/214 (30%), Positives = 108/214 (50%)
 Frame = +2

Query: 35  NHLMFADDLIIITNASRSAARNCKFCLDIYRDLTGQQANLAKSTIHLPSWCNSRIKTSIS 214
           +HL+FADDL++   AS   A     CLD++   +GQ+ N  K+ ++     ++ ++  I 
Sbjct: 107 SHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQVYFSKNVDNHLREDII 166

Query: 215 SILGMHLGSFPFKYLGVLISPKRLTVYQWQYLVEKAATCVRSWNHSALSYAGRTVLINSA 394
              G +  +   KYLG  I+P R +   + +++ K    +  W    LS AGR  L    
Sbjct: 167 QHTGFNQVNSLGKYLGANITPGRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFV 226

Query: 395 LLSIPSYALSCCAVPDSVLDSISALARKFLWRPSSNGTGVHSVGWEVTTLDKSEGGLGVR 574
           + SIP Y +    +P ++ D I  + R F+W  S+ G   H V W+V  L K  GGLG +
Sbjct: 227 ISSIPYYHMQYAKIPKTICDEIEKIQRGFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFK 286

Query: 575 HLRNVKISLMAKNLFAFLNNEDKVWIHLLHFKYG 676
              ++  + + K L+  +   DK+W  +L+ KYG
Sbjct: 287 RPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYG 320


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