BLASTX nr result

ID: Dioscorea21_contig00014458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014458
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554372.1| PREDICTED: WD repeat-containing protein 20-l...   359   e-116
ref|XP_003521386.1| PREDICTED: WD repeat-containing protein 20-l...   362   e-116
ref|XP_002285063.1| PREDICTED: WD repeat-containing protein 20 [...   350   e-115
ref|XP_003625617.1| WD repeat-containing protein [Medicago trunc...   357   e-115
ref|XP_002322873.1| predicted protein [Populus trichocarpa] gi|2...   340   e-113

>ref|XP_003554372.1| PREDICTED: WD repeat-containing protein 20-like [Glycine max]
          Length = 550

 Score =  359 bits (922), Expect(2) = e-116
 Identities = 171/201 (85%), Positives = 182/201 (90%)
 Frame = -1

Query: 813 IGLHSGDIYSVSLRQQLQDPGKKLVGAHHYNKDGIVNNSRCTCISWIPEGDGTSVVYSTF 634
           IGL+SGD+YSVSLRQQLQD GKK VGA HYN+DG VNNSRCTCI+W+P GDG+      F
Sbjct: 195 IGLNSGDVYSVSLRQQLQDVGKKPVGALHYNRDGSVNNSRCTCIAWVPGGDGS------F 248

Query: 633 VVSHADGNIYVYEKNKDGTADCSFPVIKDQSQFMVAHAKSSKSNPIARWHICQGSINSIS 454
           VVSHADGN+YVYEKNKDG  D SFPV+KDQ+QF VAHA+ SKSNPIARWHICQGSINSIS
Sbjct: 249 VVSHADGNLYVYEKNKDGAGDSSFPVVKDQTQFSVAHARYSKSNPIARWHICQGSINSIS 308

Query: 453 FSADGAFLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQ 274
           FS DGAFLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWS DGKYILTGGEDDLVQ
Sbjct: 309 FSMDGAFLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQ 368

Query: 273 VWSMEDRKIVACGEGHNSWVS 211
           VWSMEDRK+VA GEGHNSWVS
Sbjct: 369 VWSMEDRKVVAWGEGHNSWVS 389



 Score = 87.4 bits (215), Expect(2) = e-116
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = -2

Query: 146 NSWVSGVTFDSYWSVPTSDGTGENVMYRFGSVGQDTQLLLWDLVMDEI 3
           NSWVSGV FDSYWS P S+  GE +MYRFGSVGQDTQLLLWDL MDEI
Sbjct: 385 NSWVSGVAFDSYWSSPNSNDNGETIMYRFGSVGQDTQLLLWDLEMDEI 432


>ref|XP_003521386.1| PREDICTED: WD repeat-containing protein 20-like [Glycine max]
          Length = 550

 Score =  362 bits (928), Expect(2) = e-116
 Identities = 171/201 (85%), Positives = 182/201 (90%)
 Frame = -1

Query: 813 IGLHSGDIYSVSLRQQLQDPGKKLVGAHHYNKDGIVNNSRCTCISWIPEGDGTSVVYSTF 634
           IGL+SGD+YSVSLRQQLQD GKKLVGA HYNKDG VNNSRCTCI+W+P GDG+      F
Sbjct: 195 IGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKDGSVNNSRCTCIAWVPGGDGS------F 248

Query: 633 VVSHADGNIYVYEKNKDGTADCSFPVIKDQSQFMVAHAKSSKSNPIARWHICQGSINSIS 454
           VVSH DGN+YVYEKNKDG  D SFPV+KDQ+QF VAHA+ SKSNPIARWHICQGSINSIS
Sbjct: 249 VVSHTDGNLYVYEKNKDGAGDSSFPVVKDQTQFSVAHARYSKSNPIARWHICQGSINSIS 308

Query: 453 FSADGAFLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQ 274
           FS DGA+LATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWS DGKYILTGGEDDLVQ
Sbjct: 309 FSMDGAYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQ 368

Query: 273 VWSMEDRKIVACGEGHNSWVS 211
           VWSMEDRK+VA GEGHNSWVS
Sbjct: 369 VWSMEDRKVVAWGEGHNSWVS 389



 Score = 84.3 bits (207), Expect(2) = e-116
 Identities = 38/48 (79%), Positives = 40/48 (83%)
 Frame = -2

Query: 146 NSWVSGVTFDSYWSVPTSDGTGENVMYRFGSVGQDTQLLLWDLVMDEI 3
           NSWVSGV FDSYW+ P S+  GE V YRFGSVGQDTQLLLWDL MDEI
Sbjct: 385 NSWVSGVAFDSYWTSPNSNDNGETVTYRFGSVGQDTQLLLWDLEMDEI 432


>ref|XP_002285063.1| PREDICTED: WD repeat-containing protein 20 [Vitis vinifera]
           gi|297746239|emb|CBI16295.3| unnamed protein product
           [Vitis vinifera]
          Length = 548

 Score =  350 bits (897), Expect(2) = e-115
 Identities = 165/201 (82%), Positives = 181/201 (90%)
 Frame = -1

Query: 813 IGLHSGDIYSVSLRQQLQDPGKKLVGAHHYNKDGIVNNSRCTCISWIPEGDGTSVVYSTF 634
           IGL+SGD+YSVSLRQQLQD GKKLVGA HYNKDG V+ SRCT I+WIP+GDG       F
Sbjct: 194 IGLNSGDVYSVSLRQQLQDFGKKLVGAQHYNKDGSVSTSRCTSIAWIPQGDGA------F 247

Query: 633 VVSHADGNIYVYEKNKDGTADCSFPVIKDQSQFMVAHAKSSKSNPIARWHICQGSINSIS 454
            V+H+DGN+YVYEK KDGT D SFPVIKDQ+QF VAHA+SSKSNP+ARWHICQGSINSI+
Sbjct: 248 AVAHSDGNLYVYEKGKDGTGDSSFPVIKDQTQFTVAHARSSKSNPVARWHICQGSINSIA 307

Query: 453 FSADGAFLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQ 274
           FS+DG +LATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWS DGKYILTGGEDDLVQ
Sbjct: 308 FSSDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSLDGKYILTGGEDDLVQ 367

Query: 273 VWSMEDRKIVACGEGHNSWVS 211
           VWSMEDRK+VA GEGH+SWVS
Sbjct: 368 VWSMEDRKVVAWGEGHSSWVS 388



 Score = 91.7 bits (226), Expect(2) = e-115
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -2

Query: 146 NSWVSGVTFDSYWSVPTSDGTGENVMYRFGSVGQDTQLLLWDLVMDEI 3
           +SWVSGV FDSYWS P+SDGTGE+VMYRFGSVGQDTQLLLWDL M+EI
Sbjct: 384 SSWVSGVAFDSYWSSPSSDGTGESVMYRFGSVGQDTQLLLWDLSMEEI 431


>ref|XP_003625617.1| WD repeat-containing protein [Medicago truncatula]
           gi|355500632|gb|AES81835.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 552

 Score =  357 bits (917), Expect(2) = e-115
 Identities = 166/201 (82%), Positives = 181/201 (90%)
 Frame = -1

Query: 813 IGLHSGDIYSVSLRQQLQDPGKKLVGAHHYNKDGIVNNSRCTCISWIPEGDGTSVVYSTF 634
           IGL SGD+YSVSLRQQLQD GKK+VGAHHYNKDGI+NNSRCTCISW+P GDG       F
Sbjct: 192 IGLFSGDVYSVSLRQQLQDVGKKIVGAHHYNKDGILNNSRCTCISWVPGGDGA------F 245

Query: 633 VVSHADGNIYVYEKNKDGTADCSFPVIKDQSQFMVAHAKSSKSNPIARWHICQGSINSIS 454
           VV+HADGN+YVYEKNKDG  + SFP++KDQ+ F VAHA+ SKSNPIARWHICQGSINSIS
Sbjct: 246 VVAHADGNLYVYEKNKDGAGESSFPILKDQTLFSVAHARYSKSNPIARWHICQGSINSIS 305

Query: 453 FSADGAFLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQ 274
           FSADGA+LATVGRDGYLRVFDY+KE L+CGGKSYYG LLCCAWS DGKYILTGGEDDLVQ
Sbjct: 306 FSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQ 365

Query: 273 VWSMEDRKIVACGEGHNSWVS 211
           VWSMEDRK+VA GEGHNSWVS
Sbjct: 366 VWSMEDRKVVAWGEGHNSWVS 386



 Score = 83.6 bits (205), Expect(2) = e-115
 Identities = 37/48 (77%), Positives = 40/48 (83%)
 Frame = -2

Query: 146 NSWVSGVTFDSYWSVPTSDGTGENVMYRFGSVGQDTQLLLWDLVMDEI 3
           NSWVSGV FDSYWS P S+  GE + YRFGSVGQDTQLLLW+L MDEI
Sbjct: 382 NSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWELEMDEI 429


>ref|XP_002322873.1| predicted protein [Populus trichocarpa] gi|222867503|gb|EEF04634.1|
           predicted protein [Populus trichocarpa]
          Length = 560

 Score =  340 bits (872), Expect(2) = e-113
 Identities = 164/206 (79%), Positives = 177/206 (85%), Gaps = 5/206 (2%)
 Frame = -1

Query: 813 IGLHSGDIYSVSLRQQLQDPGKKLVGAHHYNKDGIVNNS-----RCTCISWIPEGDGTSV 649
           IGL SGD+YSVSLRQQLQD GKKLVGAHHYNKDG VNN      RC  I+W+P GDG   
Sbjct: 199 IGLSSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNRQEYLYRCMSIAWVPGGDGA-- 256

Query: 648 VYSTFVVSHADGNIYVYEKNKDGTADCSFPVIKDQSQFMVAHAKSSKSNPIARWHICQGS 469
               FVV+HADGN+YVYEK+KDG  D SFPVIKDQ+QF V+HA+ SKSNPIARWHICQGS
Sbjct: 257 ----FVVAHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVSHARYSKSNPIARWHICQGS 312

Query: 468 INSISFSADGAFLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSPDGKYILTGGE 289
           IN I+FS +GA+LATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWS D KYILTGGE
Sbjct: 313 INGIAFSNEGAYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDAKYILTGGE 372

Query: 288 DDLVQVWSMEDRKIVACGEGHNSWVS 211
           DDLVQVWSMEDRK+VA GEGHNSWVS
Sbjct: 373 DDLVQVWSMEDRKVVAWGEGHNSWVS 398



 Score = 95.1 bits (235), Expect(2) = e-113
 Identities = 43/48 (89%), Positives = 44/48 (91%)
 Frame = -2

Query: 146 NSWVSGVTFDSYWSVPTSDGTGENVMYRFGSVGQDTQLLLWDLVMDEI 3
           NSWVSGV FDSYWS P SDGTGENV+YRFGSVGQDTQLLLWDL MDEI
Sbjct: 394 NSWVSGVAFDSYWSSPNSDGTGENVVYRFGSVGQDTQLLLWDLEMDEI 441


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