BLASTX nr result

ID: Dioscorea21_contig00014432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014432
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    84   1e-14
ref|XP_002517743.1| conserved hypothetical protein [Ricinus comm...    68   7e-10
ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    66   3e-09
ref|XP_004154184.1| PREDICTED: E3 ubiquitin-protein ligase liste...    66   3e-09
ref|XP_004145301.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    66   3e-09

>ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Vitis vinifera]
          Length = 1923

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/89 (47%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = +2

Query: 17   SSLP-VQMTLAKLTALSIGYCWQEFAVGDWNFVLAQSLKWMKLLVLSMEEAAENIDDVAM 193
            S LP VQ+ L+KL A+S+GYCW+EF   DW FVL    +W++  V+ MEE AEN++DV +
Sbjct: 1331 SQLPMVQILLSKLMAVSVGYCWKEFNEEDWEFVLFHLRRWIESAVVMMEEVAENVNDVII 1390

Query: 194  KYTANKKSELILKELDAAIQALDPLQISI 280
               ++   E+ILKEL+ A+  LD  +I+I
Sbjct: 1391 NRPSSDDKEVILKELEHAVLLLDSPRINI 1419


>ref|XP_002517743.1| conserved hypothetical protein [Ricinus communis]
            gi|223543141|gb|EEF44675.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1912

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +2

Query: 29   VQMTLAKLTALSIGYCWQEFAVGDWNFVLAQSLKWMKLLVLSMEEAAENIDDVAMKYTAN 208
            V+M L+KL  +S+GYCW+EFA  DW+F   Q   W++  V+ +EE  EN+DD     T  
Sbjct: 1320 VKMFLSKLMVISVGYCWKEFAEEDWDFFFLQLRSWIQSAVVILEEVTENVDDAITNSTTT 1379

Query: 209  KKSELILK-ELDAAIQALDPLQISI 280
               +++ K E   +I  L P+ +++
Sbjct: 1380 DNLDVLRKLEQLVSISDLSPINVAV 1404


>ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Cucumis sativus]
          Length = 1755

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/84 (34%), Positives = 54/84 (64%)
 Frame = +2

Query: 29   VQMTLAKLTALSIGYCWQEFAVGDWNFVLAQSLKWMKLLVLSMEEAAENIDDVAMKYTAN 208
            VQM L++L  +S+GYCW++F+  DW F+L Q +  ++  V+ MEE AE+++D+ +K +  
Sbjct: 1290 VQMLLSELMVVSVGYCWKQFSDEDWEFLLFQLMSGIQSAVVIMEEIAESVNDIIVKSSTT 1349

Query: 209  KKSELILKELDAAIQALDPLQISI 280
                 IL++L+ ++   +P+   I
Sbjct: 1350 MDLNEILEKLEQSVLISNPIPFCI 1373


>ref|XP_004154184.1| PREDICTED: E3 ubiquitin-protein ligase listerin-like, partial
            [Cucumis sativus]
          Length = 1660

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/84 (34%), Positives = 54/84 (64%)
 Frame = +2

Query: 29   VQMTLAKLTALSIGYCWQEFAVGDWNFVLAQSLKWMKLLVLSMEEAAENIDDVAMKYTAN 208
            VQM L++L  +S+GYCW++F+  DW F+L Q +  ++  V+ MEE AE+++D+ +K +  
Sbjct: 1070 VQMLLSELMVVSVGYCWKQFSDEDWEFLLFQLMSGIQSAVVIMEEIAESVNDIIVKSSTT 1129

Query: 209  KKSELILKELDAAIQALDPLQISI 280
                 IL++L+ ++   +P+   I
Sbjct: 1130 MDLNEILEKLEQSVLISNPIPFCI 1153


>ref|XP_004145301.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Cucumis sativus]
          Length = 1919

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/84 (34%), Positives = 54/84 (64%)
 Frame = +2

Query: 29   VQMTLAKLTALSIGYCWQEFAVGDWNFVLAQSLKWMKLLVLSMEEAAENIDDVAMKYTAN 208
            VQM L++L  +S+GYCW++F+  DW F+L Q +  ++  V+ MEE AE+++D+ +K +  
Sbjct: 1329 VQMLLSELMVVSVGYCWKQFSDEDWEFLLFQLMSGIQSAVVIMEEIAESVNDIIVKSSTT 1388

Query: 209  KKSELILKELDAAIQALDPLQISI 280
                 IL++L+ ++   +P+   I
Sbjct: 1389 MDLNEILEKLEQSVLISNPIPFCI 1412


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