BLASTX nr result

ID: Dioscorea21_contig00014406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014406
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi...   353   5e-95
ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricin...   351   2e-94
ref|XP_003519435.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   348   1e-93
ref|NP_001175899.1| Os09g0482680 [Oryza sativa Japonica Group] g...   345   7e-93
ref|XP_002462556.1| hypothetical protein SORBIDRAFT_02g028070 [S...   345   1e-92

>ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera]
           gi|297739240|emb|CBI28891.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  353 bits (905), Expect = 5e-95
 Identities = 169/219 (77%), Positives = 196/219 (89%)
 Frame = -1

Query: 986 YVATRGLYSLKPPTIFLPSCIKEDVEKLFDIHRSMSQTELNLEIVALDIGDTYEIRNNLV 807
           YVATRGLY+LKPPTIF+P CIKEDVEKLFDIHR++SQ EL L++VALD+G+TYE+RNNLV
Sbjct: 135 YVATRGLYNLKPPTIFVPPCIKEDVEKLFDIHRALSQVELKLDLVALDVGETYEMRNNLV 194

Query: 806 VRPFKTHHVIPSQGYVIYSMRNKLKKQYAHLKGPQLKNLKVSGIQITDTILSPEVAFTGD 627
           VRPFKTHHVIPSQGYVIY++R KLKKQY HLKG Q++ LK SGI+ITDTILSPEVAFTGD
Sbjct: 195 VRPFKTHHVIPSQGYVIYTVRKKLKKQYIHLKGKQIEKLKNSGIEITDTILSPEVAFTGD 254

Query: 626 TTSDFILEPRNADALRAKVLITEATFLDEENDVEHARQHGHMHLSEIIANAQWFRNKAIL 447
           T SDF+LEPRNADALRAKVLITEATFLD    ++HAR+HGH HL EII NA+W RNKA+L
Sbjct: 255 TRSDFMLEPRNADALRAKVLITEATFLDNGISIDHAREHGHTHLFEIIENAEWIRNKAVL 314

Query: 446 LTHFSSRYKIEDIRQAIAKLQPKLSPKIVALTEGFRSAY 330
           LTHFSSRY IEDIR+A++KLQ K+S ++V L EGF+S Y
Sbjct: 315 LTHFSSRYHIEDIRKAVSKLQSKVSARVVPLMEGFKSMY 353


>ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricinus communis]
           gi|223531595|gb|EEF33423.1| ribonuclease z, chloroplast,
           putative [Ricinus communis]
          Length = 361

 Score =  351 bits (900), Expect = 2e-94
 Identities = 165/219 (75%), Positives = 195/219 (89%)
 Frame = -1

Query: 986 YVATRGLYSLKPPTIFLPSCIKEDVEKLFDIHRSMSQTELNLEIVALDIGDTYEIRNNLV 807
           YVA+RGLY+LKPPT+F+P CIKEDVEKLFDIHRSM Q ELNLE+VALD+G+TYE+RNN+V
Sbjct: 142 YVASRGLYNLKPPTVFVPPCIKEDVEKLFDIHRSMGQVELNLELVALDVGETYELRNNVV 201

Query: 806 VRPFKTHHVIPSQGYVIYSMRNKLKKQYAHLKGPQLKNLKVSGIQITDTILSPEVAFTGD 627
           VRPF+T HVIPSQGYVIYS+R KLKKQY HLKG Q++ LK SG++ITD +LSPEVAFTGD
Sbjct: 202 VRPFRTQHVIPSQGYVIYSVRKKLKKQYTHLKGKQIEKLKKSGVEITDIMLSPEVAFTGD 261

Query: 626 TTSDFILEPRNADALRAKVLITEATFLDEENDVEHARQHGHMHLSEIIANAQWFRNKAIL 447
           TT++++L+P NADALRAKVLITEATFLDE   +EHARQHGH HL EII NA+W RNK++L
Sbjct: 262 TTAEYMLDPHNADALRAKVLITEATFLDEGFSIEHARQHGHTHLLEIIENAEWIRNKSVL 321

Query: 446 LTHFSSRYKIEDIRQAIAKLQPKLSPKIVALTEGFRSAY 330
           LTHFSSRY +EDIRQA+ KLQ K+S K+V LTEGF+S Y
Sbjct: 322 LTHFSSRYTVEDIRQAVLKLQSKVSAKVVPLTEGFKSTY 360


>ref|XP_003519435.1| PREDICTED: ribonuclease Z, chloroplastic-like [Glycine max]
          Length = 354

 Score =  348 bits (893), Expect = 1e-93
 Identities = 166/219 (75%), Positives = 193/219 (88%)
 Frame = -1

Query: 986 YVATRGLYSLKPPTIFLPSCIKEDVEKLFDIHRSMSQTELNLEIVALDIGDTYEIRNNLV 807
           YVA+RGL++LKPPT+F+P CIKEDVEKL DIHR+M Q ELN E+VALD+G+TYEIRNNLV
Sbjct: 135 YVASRGLFNLKPPTVFVPPCIKEDVEKLLDIHRTMGQVELNAEVVALDVGETYEIRNNLV 194

Query: 806 VRPFKTHHVIPSQGYVIYSMRNKLKKQYAHLKGPQLKNLKVSGIQITDTILSPEVAFTGD 627
           VRPF+T HVIPSQGYV+YS+R KL+KQYAHL G Q++ LK SGI+ITD ILSPEVAFTGD
Sbjct: 195 VRPFRTQHVIPSQGYVVYSIRKKLRKQYAHLNGKQIEKLKKSGIEITDMILSPEVAFTGD 254

Query: 626 TTSDFILEPRNADALRAKVLITEATFLDEENDVEHARQHGHMHLSEIIANAQWFRNKAIL 447
           TTSDF+L+P NADALRAK+LITEATFLD+   ++HARQHGH HL EIIANAQW RNKA+L
Sbjct: 255 TTSDFMLDPCNADALRAKILITEATFLDDSFSIDHARQHGHTHLFEIIANAQWIRNKAVL 314

Query: 446 LTHFSSRYKIEDIRQAIAKLQPKLSPKIVALTEGFRSAY 330
           LTHFS RY IEDIRQA +KLQ +LS K+V LTEGF+S Y
Sbjct: 315 LTHFSPRYTIEDIRQAASKLQSRLSAKVVPLTEGFKSMY 353


>ref|NP_001175899.1| Os09g0482680 [Oryza sativa Japonica Group]
           gi|215697960|dbj|BAG92124.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255678994|dbj|BAH94627.1| Os09g0482680 [Oryza sativa
           Japonica Group]
          Length = 365

 Score =  345 bits (886), Expect = 7e-93
 Identities = 163/219 (74%), Positives = 195/219 (89%)
 Frame = -1

Query: 986 YVATRGLYSLKPPTIFLPSCIKEDVEKLFDIHRSMSQTELNLEIVALDIGDTYEIRNNLV 807
           Y+ATRGLY+LKPP +F+P CIK+DVE L  IHR MSQ +L +E+VALD+G+T+EIRN+LV
Sbjct: 146 YIATRGLYNLKPPVVFVPPCIKDDVEDLLQIHRRMSQVDLKVELVALDLGETFEIRNDLV 205

Query: 806 VRPFKTHHVIPSQGYVIYSMRNKLKKQYAHLKGPQLKNLKVSGIQITDTILSPEVAFTGD 627
            RPF+THH IPSQGYVIYS+R KLKKQYAHLKG Q+  +K SG +ITDTIL PEVAFTGD
Sbjct: 206 ARPFETHHAIPSQGYVIYSVRRKLKKQYAHLKGNQIMKMKQSGAEITDTILYPEVAFTGD 265

Query: 626 TTSDFILEPRNADALRAKVLITEATFLDEENDVEHARQHGHMHLSEIIANAQWFRNKAIL 447
           T SDFIL+PRNADALRAKVLITEATFLD++ DV+HAR+HGHMHLSEI+ ++QWFRNKAI+
Sbjct: 266 TKSDFILDPRNADALRAKVLITEATFLDDQIDVDHAREHGHMHLSEIMEHSQWFRNKAIV 325

Query: 446 LTHFSSRYKIEDIRQAIAKLQPKLSPKIVALTEGFRSAY 330
           LTHFS+RY +EDIRQA++KLQ KLS K+VALTEGF+S Y
Sbjct: 326 LTHFSNRYSLEDIRQAVSKLQSKLSSKVVALTEGFKSDY 364


>ref|XP_002462556.1| hypothetical protein SORBIDRAFT_02g028070 [Sorghum bicolor]
           gi|241925933|gb|EER99077.1| hypothetical protein
           SORBIDRAFT_02g028070 [Sorghum bicolor]
          Length = 359

 Score =  345 bits (885), Expect = 1e-92
 Identities = 163/219 (74%), Positives = 194/219 (88%)
 Frame = -1

Query: 986 YVATRGLYSLKPPTIFLPSCIKEDVEKLFDIHRSMSQTELNLEIVALDIGDTYEIRNNLV 807
           Y+ATRGLY+LKPPT+F+P CIK+DVE L  +HR MSQ EL +E+VALD+G+TYEIRN+LV
Sbjct: 140 YIATRGLYNLKPPTVFVPPCIKDDVEDLLQVHRRMSQIELKVELVALDLGETYEIRNDLV 199

Query: 806 VRPFKTHHVIPSQGYVIYSMRNKLKKQYAHLKGPQLKNLKVSGIQITDTILSPEVAFTGD 627
            RPF+T+H IPSQGYVIYS+R KLKKQYAHLKG Q+  LK SG +ITDTIL PEVAFTGD
Sbjct: 200 ARPFQTYHAIPSQGYVIYSIRRKLKKQYAHLKGSQIMKLKQSGTEITDTILYPEVAFTGD 259

Query: 626 TTSDFILEPRNADALRAKVLITEATFLDEENDVEHARQHGHMHLSEIIANAQWFRNKAIL 447
           T SDFIL+PRNADALRAKVLITEATFLD+  DVEHAR+HGHMHLSEI+ ++QWFRN+ I+
Sbjct: 260 TKSDFILDPRNADALRAKVLITEATFLDDHVDVEHAREHGHMHLSEIMEHSQWFRNETIV 319

Query: 446 LTHFSSRYKIEDIRQAIAKLQPKLSPKIVALTEGFRSAY 330
           LTHFS+RY +EDI QA+++LQPKL+ KIVALTEGF+S Y
Sbjct: 320 LTHFSNRYSLEDIHQAVSRLQPKLNSKIVALTEGFKSEY 358


Top