BLASTX nr result

ID: Dioscorea21_contig00014396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014396
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265199.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   246   2e-63
emb|CBI16734.3| unnamed protein product [Vitis vinifera]              246   2e-63
gb|AAL86478.1|AC077693_17 putative nuclear protein [Oryza sativa...   238   3e-61
ref|XP_002320579.1| predicted protein [Populus trichocarpa] gi|2...   238   4e-61
emb|CAN61028.1| hypothetical protein VITISV_010074 [Vitis vinifera]   238   4e-61

>ref|XP_002265199.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           assembly factor 3-like [Vitis vinifera]
          Length = 173

 Score =  246 bits (627), Expect = 2e-63
 Identities = 120/150 (80%), Positives = 136/150 (90%)
 Frame = -3

Query: 452 LPDLVKTLRREAPKISNQTLPSLRRAFSLYDQINLIDSVPEDQLRFQGYTDTGFTVNGVK 273
           LP L++ LR+E PK + Q LPSLRRAFSLYDQINLID+VPEDQLRFQGYTDTGFTV+GV+
Sbjct: 12  LPTLMRALRKEPPKPTTQPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYTDTGFTVSGVQ 71

Query: 272 YEGSLLIIENKLMSWSPKRFSEITVESLSIFQIVRPVPEILILGCGRHIEPVSPELRRFI 93
           YEGSLL + N L+SW PK+ SEIT +SLSIF+IVRP+PEILILGCGRHIE V PELRR+I
Sbjct: 72  YEGSLLCVGNVLLSWGPKKLSEITADSLSIFRIVRPIPEILILGCGRHIEQVDPELRRYI 131

Query: 92  RSTGMKLEAIDSRNAASTYNILNEEGRIVA 3
           +STGMKLEA+DSRNAASTYNILNEEGRIVA
Sbjct: 132 QSTGMKLEAVDSRNAASTYNILNEEGRIVA 161


>emb|CBI16734.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score =  246 bits (627), Expect = 2e-63
 Identities = 120/150 (80%), Positives = 136/150 (90%)
 Frame = -3

Query: 452 LPDLVKTLRREAPKISNQTLPSLRRAFSLYDQINLIDSVPEDQLRFQGYTDTGFTVNGVK 273
           LP L++ LR+E PK + Q LPSLRRAFSLYDQINLID+VPEDQLRFQGYTDTGFTV+GV+
Sbjct: 11  LPTLMRALRKEPPKPTTQPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYTDTGFTVSGVQ 70

Query: 272 YEGSLLIIENKLMSWSPKRFSEITVESLSIFQIVRPVPEILILGCGRHIEPVSPELRRFI 93
           YEGSLL + N L+SW PK+ SEIT +SLSIF+IVRP+PEILILGCGRHIE V PELRR+I
Sbjct: 71  YEGSLLCVGNVLLSWGPKKLSEITADSLSIFRIVRPIPEILILGCGRHIEQVDPELRRYI 130

Query: 92  RSTGMKLEAIDSRNAASTYNILNEEGRIVA 3
           +STGMKLEA+DSRNAASTYNILNEEGRIVA
Sbjct: 131 QSTGMKLEAVDSRNAASTYNILNEEGRIVA 160


>gb|AAL86478.1|AC077693_17 putative nuclear protein [Oryza sativa Japonica Group]
           gi|31433611|gb|AAP55103.1| nuclear protein E3-3, isoform
           a, putative, expressed [Oryza sativa Japonica Group]
          Length = 174

 Score =  238 bits (608), Expect = 3e-61
 Identities = 121/164 (73%), Positives = 138/164 (84%), Gaps = 4/164 (2%)
 Frame = -3

Query: 482 AMAGGACRRVLPDLVKTLRRE----APKISNQTLPSLRRAFSLYDQINLIDSVPEDQLRF 315
           A  G      LP LVK+LR E    AP++ +  LPSLRR FSLYDQINLIDSVPEDQLRF
Sbjct: 3   AARGQKAVAALPHLVKSLRSEPVSNAPRLRH--LPSLRRTFSLYDQINLIDSVPEDQLRF 60

Query: 314 QGYTDTGFTVNGVKYEGSLLIIENKLMSWSPKRFSEITVESLSIFQIVRPVPEILILGCG 135
           Q Y DTGF +N VKYEGSLLI+ENK+M+W+PK F+EIT ESLSIF++V P+PEILILGCG
Sbjct: 61  QSYDDTGFNINKVKYEGSLLIVENKIMTWAPKSFAEITAESLSIFKVVHPIPEILILGCG 120

Query: 134 RHIEPVSPELRRFIRSTGMKLEAIDSRNAASTYNILNEEGRIVA 3
           RHI+P+SPELR+FIRSTGMKLEA+DSRNAASTYNILNEEGR VA
Sbjct: 121 RHIQPISPELRKFIRSTGMKLEAVDSRNAASTYNILNEEGRPVA 164


>ref|XP_002320579.1| predicted protein [Populus trichocarpa] gi|222861352|gb|EEE98894.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  238 bits (607), Expect = 4e-61
 Identities = 117/150 (78%), Positives = 133/150 (88%)
 Frame = -3

Query: 452 LPDLVKTLRREAPKISNQTLPSLRRAFSLYDQINLIDSVPEDQLRFQGYTDTGFTVNGVK 273
           LP L+++LR+E PK   + LPSLRRAFSLYDQINLID+VPEDQLRFQGYTDTGF VNGV+
Sbjct: 5   LPKLIQSLRKECPKPRIKQLPSLRRAFSLYDQINLIDNVPEDQLRFQGYTDTGFRVNGVE 64

Query: 272 YEGSLLIIENKLMSWSPKRFSEITVESLSIFQIVRPVPEILILGCGRHIEPVSPELRRFI 93
           YEGSLL + N L SW+P  FS+IT +SLSIFQIVRP+PEILI+GCGR+ +PV PELRRFI
Sbjct: 65  YEGSLLCVGNLLTSWAPSSFSQITPDSLSIFQIVRPIPEILIIGCGRYTQPVDPELRRFI 124

Query: 92  RSTGMKLEAIDSRNAASTYNILNEEGRIVA 3
           RSTGMKLEA+DSRNAASTYNILNEEGR VA
Sbjct: 125 RSTGMKLEAVDSRNAASTYNILNEEGRPVA 154


>emb|CAN61028.1| hypothetical protein VITISV_010074 [Vitis vinifera]
          Length = 158

 Score =  238 bits (607), Expect = 4e-61
 Identities = 116/146 (79%), Positives = 132/146 (90%)
 Frame = -3

Query: 440 VKTLRREAPKISNQTLPSLRRAFSLYDQINLIDSVPEDQLRFQGYTDTGFTVNGVKYEGS 261
           ++ LR+E PK +   LPSLRRAFSLYDQINLID+VPEDQLRFQGYTDTGFTV+GV+YEGS
Sbjct: 1   MRALRKEPPKPTTXPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYTDTGFTVSGVQYEGS 60

Query: 260 LLIIENKLMSWSPKRFSEITVESLSIFQIVRPVPEILILGCGRHIEPVSPELRRFIRSTG 81
           LL + N L+SW PK+ SEIT +SLSIF+IVRP+PEILILGCGRHIE V PELRR+I+STG
Sbjct: 61  LLCVGNVLLSWGPKKLSEITADSLSIFRIVRPIPEILILGCGRHIEQVDPELRRYIQSTG 120

Query: 80  MKLEAIDSRNAASTYNILNEEGRIVA 3
           MKLEA+DSRNAASTYNILNEEGRIVA
Sbjct: 121 MKLEAVDSRNAASTYNILNEEGRIVA 146


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