BLASTX nr result
ID: Dioscorea21_contig00014375
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00014375
(1933 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containi... 511 e-142
emb|CBI40106.3| unnamed protein product [Vitis vinifera] 509 e-141
ref|XP_002520121.1| pentatricopeptide repeat-containing protein,... 497 e-138
ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|2... 493 e-136
gb|AEP33759.1| organelle transcript processing 82, partial [Bras... 315 2e-83
>ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
[Vitis vinifera]
Length = 587
Score = 511 bits (1316), Expect = e-142
Identities = 247/411 (60%), Positives = 310/411 (75%)
Frame = +3
Query: 606 TGFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLD 785
TGF EN Q E+GL FKLM QQGL PDRF+F+ VLGIC E+L+ G LHCQT+KL LD
Sbjct: 175 TGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLD 234
Query: 786 TSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYREM 965
++ F+ NV++T+YS+ I E AF I+EKDVISWNT I ACSH DHAK L V++ M
Sbjct: 235 STPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHM 294
Query: 966 ENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGA 1145
++ PDDFT + L ACA LAS+ HG QIH HL+R++ D+GV NAL+NMYAKCG
Sbjct: 295 TEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGC 354
Query: 1146 IELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTA 1325
I A +F + + NLVS+NT+I G GNHG G+ A+E+F+QM G PDS+TFIG+LTA
Sbjct: 355 IGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTA 414
Query: 1326 CSHAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMFPFGNDLI 1505
C+HAGLVD G +YF+SM+ETYGI+P +EH SCL+DMLGRAGRL AE Y+ FPF ND +
Sbjct: 415 CNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPV 474
Query: 1506 IWGSLLSSCRLHKNVVVGERVAKRLLELQPTVSSPYVLLSNLYASNGRWNDVAEARKMLK 1685
+ SLLS+ RLH +VV+GER+AK LL+LQP +SPYVLLSNLYAS+G W+ VAEARK LK
Sbjct: 475 VLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLK 534
Query: 1686 GSGVKKEPGHSMIEIEGGTVKFTVGDFSHKRIEEVKEILGTLNFQAEEFNL 1838
GSG+KKEPGHS+IE+ G KFT+GDF+H RI+E+K IL TL++ E L
Sbjct: 535 GSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWAVGEVTL 585
Score = 140 bits (352), Expect = 2e-30
Identities = 65/127 (51%), Positives = 96/127 (75%)
Frame = +1
Query: 244 MFLQQLGAVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHL 423
M + L ++L+ C K K + GL LHAAV+K G +SD+++ NH++NMYAKCG + A+ +
Sbjct: 1 MITETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQV 60
Query: 424 FDSMPNRNLISWSAIISGYVQAEKPLKAMEIFSQMPLQPNEYIYASVITACASLSALVQG 603
FD M +NL+SWSA+ISGY QA +P A++++SQM L PNEY++ASVI+ACASLSA+ G
Sbjct: 61 FDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLG 120
Query: 604 KQVLQRT 624
+++ R+
Sbjct: 121 QKIHSRS 127
Score = 137 bits (346), Expect = 8e-30
Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 1/316 (0%)
Frame = +3
Query: 702 AVLGICCNKEDLEAGRSLHCQTIKLGLDTSAFVSNVLMTIYSKCGSIGSVESAFWSIKEK 881
++L C + L G SLH +K G + F+SN ++ +Y+KCG F + EK
Sbjct: 8 SLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEK 67
Query: 882 DVISWNTFIVACSHFGDHAKALMVYREMENACDIDPDDFTLSGVLTACAELASIRHGSQI 1061
+++SW+ I G+ A+ +Y +M + P+++ + V++ACA L+++ G +I
Sbjct: 68 NLVSWSAMISGYDQAGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKI 123
Query: 1062 HTHLIRSKPNLDIGVCNALINMYAKCGAIELALRLFHSIPNRNLVSYNTMIMGLGNHGRG 1241
H+ ++ V N+LI+MY KC AL +F + P N VSYN +I G + +
Sbjct: 124 HSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQL 183
Query: 1242 QTALEIFKQMKTWGFSPDSITFIGVLTACSHAGLVDAGL-IYFDSMKETYGISPQLEHLS 1418
+ LE FK M+ G PD F+GVL C+ + G ++ ++K +P + ++
Sbjct: 184 ERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNV- 242
Query: 1419 CLVDMLGRAGRLEVAERYIEMFPFGNDLIIWGSLLSSCRLHKNVVVGERVAKRLLELQPT 1598
++ M ++ AE+ + D+I W +L+++C + G RV K + E
Sbjct: 243 -IITMYSELNLIQEAEKAFRLIE-EKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 1599 VSSPYVLLSNLYASNG 1646
+ S L A G
Sbjct: 301 RPDDFTFTSALAACAG 316
Score = 112 bits (280), Expect = 4e-22
Identities = 76/324 (23%), Positives = 148/324 (45%), Gaps = 1/324 (0%)
Frame = +3
Query: 606 TGFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLD 785
+G+ + +P+ + L+ +Q L P+ + F +V+ C + + G+ +H +++K G +
Sbjct: 77 SGYDQAGEPQMAIDLY---SQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYE 133
Query: 786 TSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYREM 965
+ +FVSN L+++Y KC S F + E + +S+N I + L ++ M
Sbjct: 134 SISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLM 193
Query: 966 ENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGA 1145
+ PD F GVL C +++ G+++H ++ + + N +I MY++
Sbjct: 194 RQQ-GLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNL 252
Query: 1146 IELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQM-KTWGFSPDSITFIGVLT 1322
I+ A + F I ++++S+NT+I + L +FK M + PD TF L
Sbjct: 253 IQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALA 312
Query: 1323 ACSHAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMFPFGNDL 1502
AC+ + G + T + L + LV+M + G + A N L
Sbjct: 313 ACAGLASMSHGKQIHAHLMRT-RLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHN-L 370
Query: 1503 IIWGSLLSSCRLHKNVVVGERVAK 1574
+ W ++++ H +GER +
Sbjct: 371 VSWNTIIAGFGNHG---LGERAVE 391
Score = 76.3 bits (186), Expect = 3e-11
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Frame = +1
Query: 265 AVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNR 444
+ L C HG +HA +++ DL +GN L+NMYAKCG + A +F M +
Sbjct: 309 SALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHH 368
Query: 445 NLISWSAIISGYVQAEKPLKAMEIFSQM---PLQPNEYIYASVITACASLSALVQGK 606
NL+SW+ II+G+ +A+E+F QM ++P+ + ++TAC + +G+
Sbjct: 369 NLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ 425
Score = 74.7 bits (182), Expect = 8e-11
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +3
Query: 999 TLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGAIELALRLFHSI 1178
TLS +L C++ ++R G +H ++++ D+ + N ++NMYAKCG A ++F +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 1179 PNRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTACSHAGLVDAG- 1355
+NLVS++ MI G G Q A++++ QM P+ F V++AC+ V G
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQ 121
Query: 1356 LIYFDSMKETY 1388
I+ S+K Y
Sbjct: 122 KIHSRSLKFGY 132
Score = 74.7 bits (182), Expect = 8e-11
Identities = 32/119 (26%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 268 VLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNRN 447
VL C ++ K G LH +K+ +S ++GN +I MY++ ++ +A+ F + ++
Sbjct: 208 VLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKD 267
Query: 448 LISWSAIISGYVQAEKPLKAMEIFSQMP----LQPNEYIYASVITACASLSALVQGKQV 612
+ISW+ +I+ + K + +F M ++P+++ + S + ACA L+++ GKQ+
Sbjct: 268 VISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326
Score = 72.0 bits (175), Expect = 5e-10
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Frame = +1
Query: 235 YMNMFLQQ----LGAVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGV 402
Y MFL +V+ C G +H+ +K G+ES ++ N LI+MY KC
Sbjct: 92 YSQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQ 151
Query: 403 LSDAQHLFDSMPNRNLISWSAIISGYV---QAEKPLKAMEIFSQMPLQPNEYIYASVITA 573
SDA +F + P N +S++A+I+G+V Q E+ L+ ++ Q L P+ + + V+
Sbjct: 152 CSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGI 211
Query: 574 CASLSALVQGKQV 612
C + L +G ++
Sbjct: 212 CTTTENLKRGAEL 224
>emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 509 bits (1311), Expect = e-141
Identities = 245/404 (60%), Positives = 308/404 (76%)
Frame = +3
Query: 606 TGFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLD 785
TGF EN Q E+GL FKLM QQGL PDRF+F+ VLGIC E+L+ G LHCQT+KL LD
Sbjct: 175 TGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLD 234
Query: 786 TSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYREM 965
++ F+ NV++T+YS+ I E AF I+EKDVISWNT I ACSH DHAK L V++ M
Sbjct: 235 STPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHM 294
Query: 966 ENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGA 1145
++ PDDFT + L ACA LAS+ HG QIH HL+R++ D+GV NAL+NMYAKCG
Sbjct: 295 TEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGC 354
Query: 1146 IELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTA 1325
I A +F + + NLVS+NT+I G GNHG G+ A+E+F+QM G PDS+TFIG+LTA
Sbjct: 355 IGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTA 414
Query: 1326 CSHAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMFPFGNDLI 1505
C+HAGLVD G +YF+SM+ETYGI+P +EH SCL+DMLGRAGRL AE Y+ FPF ND +
Sbjct: 415 CNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPV 474
Query: 1506 IWGSLLSSCRLHKNVVVGERVAKRLLELQPTVSSPYVLLSNLYASNGRWNDVAEARKMLK 1685
+ SLLS+ RLH +VV+GER+AK LL+LQP +SPYVLLSNLYAS+G W+ VAEARK LK
Sbjct: 475 VLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLK 534
Query: 1686 GSGVKKEPGHSMIEIEGGTVKFTVGDFSHKRIEEVKEILGTLNF 1817
GSG+KKEPGHS+IE+ G KFT+GDF+H RI+E+K IL TL++
Sbjct: 535 GSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSW 578
Score = 140 bits (352), Expect = 2e-30
Identities = 65/127 (51%), Positives = 96/127 (75%)
Frame = +1
Query: 244 MFLQQLGAVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHL 423
M + L ++L+ C K K + GL LHAAV+K G +SD+++ NH++NMYAKCG + A+ +
Sbjct: 1 MITETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQV 60
Query: 424 FDSMPNRNLISWSAIISGYVQAEKPLKAMEIFSQMPLQPNEYIYASVITACASLSALVQG 603
FD M +NL+SWSA+ISGY QA +P A++++SQM L PNEY++ASVI+ACASLSA+ G
Sbjct: 61 FDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLG 120
Query: 604 KQVLQRT 624
+++ R+
Sbjct: 121 QKIHSRS 127
Score = 137 bits (346), Expect = 8e-30
Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 1/316 (0%)
Frame = +3
Query: 702 AVLGICCNKEDLEAGRSLHCQTIKLGLDTSAFVSNVLMTIYSKCGSIGSVESAFWSIKEK 881
++L C + L G SLH +K G + F+SN ++ +Y+KCG F + EK
Sbjct: 8 SLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEK 67
Query: 882 DVISWNTFIVACSHFGDHAKALMVYREMENACDIDPDDFTLSGVLTACAELASIRHGSQI 1061
+++SW+ I G+ A+ +Y +M + P+++ + V++ACA L+++ G +I
Sbjct: 68 NLVSWSAMISGYDQAGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKI 123
Query: 1062 HTHLIRSKPNLDIGVCNALINMYAKCGAIELALRLFHSIPNRNLVSYNTMIMGLGNHGRG 1241
H+ ++ V N+LI+MY KC AL +F + P N VSYN +I G + +
Sbjct: 124 HSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQL 183
Query: 1242 QTALEIFKQMKTWGFSPDSITFIGVLTACSHAGLVDAGL-IYFDSMKETYGISPQLEHLS 1418
+ LE FK M+ G PD F+GVL C+ + G ++ ++K +P + ++
Sbjct: 184 ERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNV- 242
Query: 1419 CLVDMLGRAGRLEVAERYIEMFPFGNDLIIWGSLLSSCRLHKNVVVGERVAKRLLELQPT 1598
++ M ++ AE+ + D+I W +L+++C + G RV K + E
Sbjct: 243 -IITMYSELNLIQEAEKAFRLIE-EKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 1599 VSSPYVLLSNLYASNG 1646
+ S L A G
Sbjct: 301 RPDDFTFTSALAACAG 316
Score = 112 bits (280), Expect = 4e-22
Identities = 76/324 (23%), Positives = 148/324 (45%), Gaps = 1/324 (0%)
Frame = +3
Query: 606 TGFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLD 785
+G+ + +P+ + L+ +Q L P+ + F +V+ C + + G+ +H +++K G +
Sbjct: 77 SGYDQAGEPQMAIDLY---SQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYE 133
Query: 786 TSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYREM 965
+ +FVSN L+++Y KC S F + E + +S+N I + L ++ M
Sbjct: 134 SISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLM 193
Query: 966 ENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGA 1145
+ PD F GVL C +++ G+++H ++ + + N +I MY++
Sbjct: 194 RQQ-GLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNL 252
Query: 1146 IELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQM-KTWGFSPDSITFIGVLT 1322
I+ A + F I ++++S+NT+I + L +FK M + PD TF L
Sbjct: 253 IQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALA 312
Query: 1323 ACSHAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMFPFGNDL 1502
AC+ + G + T + L + LV+M + G + A N L
Sbjct: 313 ACAGLASMSHGKQIHAHLMRT-RLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHN-L 370
Query: 1503 IIWGSLLSSCRLHKNVVVGERVAK 1574
+ W ++++ H +GER +
Sbjct: 371 VSWNTIIAGFGNHG---LGERAVE 391
Score = 76.3 bits (186), Expect = 3e-11
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Frame = +1
Query: 265 AVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNR 444
+ L C HG +HA +++ DL +GN L+NMYAKCG + A +F M +
Sbjct: 309 SALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHH 368
Query: 445 NLISWSAIISGYVQAEKPLKAMEIFSQM---PLQPNEYIYASVITACASLSALVQGK 606
NL+SW+ II+G+ +A+E+F QM ++P+ + ++TAC + +G+
Sbjct: 369 NLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ 425
Score = 74.7 bits (182), Expect = 8e-11
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +3
Query: 999 TLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGAIELALRLFHSI 1178
TLS +L C++ ++R G +H ++++ D+ + N ++NMYAKCG A ++F +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 1179 PNRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTACSHAGLVDAG- 1355
+NLVS++ MI G G Q A++++ QM P+ F V++AC+ V G
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQ 121
Query: 1356 LIYFDSMKETY 1388
I+ S+K Y
Sbjct: 122 KIHSRSLKFGY 132
Score = 74.7 bits (182), Expect = 8e-11
Identities = 32/119 (26%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 268 VLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNRN 447
VL C ++ K G LH +K+ +S ++GN +I MY++ ++ +A+ F + ++
Sbjct: 208 VLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKD 267
Query: 448 LISWSAIISGYVQAEKPLKAMEIFSQMP----LQPNEYIYASVITACASLSALVQGKQV 612
+ISW+ +I+ + K + +F M ++P+++ + S + ACA L+++ GKQ+
Sbjct: 268 VISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326
Score = 72.0 bits (175), Expect = 5e-10
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Frame = +1
Query: 235 YMNMFLQQ----LGAVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGV 402
Y MFL +V+ C G +H+ +K G+ES ++ N LI+MY KC
Sbjct: 92 YSQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQ 151
Query: 403 LSDAQHLFDSMPNRNLISWSAIISGYV---QAEKPLKAMEIFSQMPLQPNEYIYASVITA 573
SDA +F + P N +S++A+I+G+V Q E+ L+ ++ Q L P+ + + V+
Sbjct: 152 CSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGI 211
Query: 574 CASLSALVQGKQV 612
C + L +G ++
Sbjct: 212 CTTTENLKRGAEL 224
>ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540613|gb|EEF42176.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 589
Score = 497 bits (1279), Expect = e-138
Identities = 239/410 (58%), Positives = 306/410 (74%)
Frame = +3
Query: 609 GFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLDT 788
GF EN QPEKG+ FK+M Q+G PDRF+F +LGIC + +D G LHCQ IKL L+
Sbjct: 176 GFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLED 235
Query: 789 SAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYREME 968
SAF+ NV++T+YSK I E F IKEKD+ISWNT + AC DH +AL V+R+M
Sbjct: 236 SAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDML 295
Query: 969 NACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGAI 1148
+ C + PDDFT +GVL ACA LASIRHG QIH HLIR++ D+GV NAL+NMYAKCG+I
Sbjct: 296 DVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSI 355
Query: 1149 ELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTAC 1328
+ + +F +RNLVS+NT+I GNHG G ALE F++MKT G PDS+TF+G+LTAC
Sbjct: 356 KNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTAC 415
Query: 1329 SHAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMFPFGNDLII 1508
+HAGLV+ G +YF+SM+E YGI P +EH SCL+D+LGRAGRL+ AE Y+E PFG+D II
Sbjct: 416 NHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPII 475
Query: 1509 WGSLLSSCRLHKNVVVGERVAKRLLELQPTVSSPYVLLSNLYASNGRWNDVAEARKMLKG 1688
GSLLS+CRLH ++V+GE +A +LL+LQP +SPYVLLSNLYAS+ W VAEA KMLK
Sbjct: 476 LGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKY 535
Query: 1689 SGVKKEPGHSMIEIEGGTVKFTVGDFSHKRIEEVKEILGTLNFQAEEFNL 1838
SG+KKEPGHS+I++ G KFT+GD SH RIEE+K+ + LN+ E ++
Sbjct: 536 SGLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLNWTVSEVSI 585
Score = 145 bits (367), Expect = 3e-32
Identities = 69/123 (56%), Positives = 93/123 (75%)
Frame = +1
Query: 244 MFLQQLGAVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHL 423
M + +G++L+ C K K F HGL LHAA +K G SD+ + NH+IN+Y+KCG + A+ +
Sbjct: 1 MIPEAIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRM 60
Query: 424 FDSMPNRNLISWSAIISGYVQAEKPLKAMEIFSQMPLQPNEYIYASVITACASLSALVQG 603
FD M +RNL+SWSAIISGY Q +PL A+ +FSQM + PNEY++ASVI+ACASL+AL QG
Sbjct: 61 FDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMRIVPNEYVFASVISACASLTALSQG 120
Query: 604 KQV 612
QV
Sbjct: 121 LQV 123
Score = 127 bits (319), Expect = 1e-26
Identities = 83/297 (27%), Positives = 150/297 (50%), Gaps = 1/297 (0%)
Frame = +3
Query: 702 AVLGICCNKEDLEAGRSLHCQTIKLGLDTSAFVSNVLMTIYSKCGSIGSVESAFWSIKEK 881
++L C + G SLH +K G+ + VSN ++ +YSKCG++ F + ++
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67
Query: 882 DVISWNTFIVACSHFGDHAKALMVYREMENACDIDPDDFTLSGVLTACAELASIRHGSQI 1061
+++SW+ I G AL ++ +M I P+++ + V++ACA L ++ G Q+
Sbjct: 68 NLVSWSAIISGYDQTGQPLLALNLFSQMR----IVPNEYVFASVISACASLTALSQGLQV 123
Query: 1062 HTHLIRSKPNLDIGVCNALINMYAKCGAIELALRLFHSIPNRNLVSYNTMIMGLGNHGRG 1241
H ++ V NALI+MY KCG AL + + + N VSYN +I G + +
Sbjct: 124 HAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQP 183
Query: 1242 QTALEIFKQMKTWGFSPDSITFIGVLTACSHAGLVDAGL-IYFDSMKETYGISPQLEHLS 1418
+ +E FK M+ GF+PD TF G+L C+ G+ ++ +K S + ++
Sbjct: 184 EKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNV- 242
Query: 1419 CLVDMLGRAGRLEVAERYIEMFPFGNDLIIWGSLLSSCRLHKNVVVGERVAKRLLEL 1589
++ M + +E AE+ + DLI W +L+++C K+ RV + +L++
Sbjct: 243 -IITMYSKFNLIEEAEKVFGLIK-EKDLISWNTLVTACCFCKDHERALRVFRDMLDV 297
Score = 118 bits (295), Expect = 6e-24
Identities = 87/321 (27%), Positives = 149/321 (46%), Gaps = 9/321 (2%)
Frame = +3
Query: 606 TGFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLD 785
+G+ + QP L LF +Q + P+ + F +V+ C + L G +H Q++KLG
Sbjct: 77 SGYDQTGQPLLALNLF---SQMRIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCV 133
Query: 786 TSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYREM 965
+ +FVSN L+++Y KCG + E + +S+N I K + ++ M
Sbjct: 134 SVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVM 193
Query: 966 ENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGA 1145
PD FT SG+L C G Q+H +I+ + N +I MY+K
Sbjct: 194 RQK-GFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNL 252
Query: 1146 IELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGF-SPDSITFIGVLT 1322
IE A ++F I ++L+S+NT++ + AL +F+ M F PD TF GVL
Sbjct: 253 IEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLA 312
Query: 1323 ACS------HAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMF 1484
AC+ H + LI ++ G+S + LV+M + G + + ++F
Sbjct: 313 ACAGLASIRHGKQIHGHLIRTRQYQDV-GVS------NALVNMYAKCGSI---KNSYDVF 362
Query: 1485 PFGND--LIIWGSLLSSCRLH 1541
+D L+ W +++++ H
Sbjct: 363 RRTSDRNLVSWNTIIAAFGNH 383
Score = 78.2 bits (191), Expect = 7e-12
Identities = 34/115 (29%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Frame = +1
Query: 280 CCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNRNLISW 459
C DF G+ LH +IK+ E ++GN +I MY+K ++ +A+ +F + ++LISW
Sbjct: 212 CTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISW 271
Query: 460 SAIISGYVQAEKPLKAMEIFSQMP----LQPNEYIYASVITACASLSALVQGKQV 612
+ +++ + +A+ +F M ++P+++ +A V+ ACA L+++ GKQ+
Sbjct: 272 NTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQI 326
Score = 75.9 bits (185), Expect = 4e-11
Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 1002 LSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGAIELALRLFHSIP 1181
+ +L CA++ + HG +H +++ DI V N +IN+Y+KCG + A R+F +
Sbjct: 6 IGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMS 65
Query: 1182 NRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTACSHAGLVDAGL- 1358
+RNLVS++ +I G G+ AL +F QM+ P+ F V++AC+ + GL
Sbjct: 66 DRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQ 122
Query: 1359 IYFDSMK 1379
++ S+K
Sbjct: 123 VHAQSLK 129
Score = 71.2 bits (173), Expect = 9e-10
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Frame = +1
Query: 265 AVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNR 444
+V+ C GL +HA +K+G S ++ N LI+MY KCG+ +DA + + M
Sbjct: 106 SVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEP 165
Query: 445 NLISWSAIISGYVQAEKPLKAMEIFS---QMPLQPNEYIYASVITACASLSALVQGKQV 612
N +S++A+I+G+V+ ++P K +E F Q P+ + ++ ++ C S +G Q+
Sbjct: 166 NAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQL 224
Score = 68.2 bits (165), Expect = 8e-09
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +1
Query: 268 VLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNRN 447
VL C +HG +H +I+ D+ + N L+NMYAKCG + ++ +F +RN
Sbjct: 310 VLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRN 369
Query: 448 LISWSAIISGYVQAEKPLKAMEIFSQMP---LQPNEYIYASVITACASLSALVQGK 606
L+SW+ II+ + +A+E F +M + P+ + ++TAC + +G+
Sbjct: 370 LVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQ 425
>ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|222854989|gb|EEE92536.1|
predicted protein [Populus trichocarpa]
Length = 583
Score = 493 bits (1268), Expect = e-136
Identities = 236/408 (57%), Positives = 310/408 (75%)
Frame = +3
Query: 606 TGFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLD 785
TGF EN QP+KG + ++M Q G PDRF+FV +LG C +++DL+ G LHCQTIKL L+
Sbjct: 175 TGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLN 234
Query: 786 TSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYREM 965
++AF+ N+++T+YSK + E AF SI+EKD+ISWNTFI +CSH DH KAL ++EM
Sbjct: 235 STAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEM 294
Query: 966 ENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGA 1145
N C + PD+FT + L AC+ LAS+ +G QIH HLIR++ D+G NALINMYAKCG
Sbjct: 295 LNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGC 354
Query: 1146 IELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTA 1325
I A +F + ++NLVS+NTMI G GNHG G A E+F +MKT G PDS+TF+G+LTA
Sbjct: 355 IAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTA 414
Query: 1326 CSHAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMFPFGNDLI 1505
+HAGLVD GL+YF+SM+ETYGISP++EH SCL+D+LGRAGRL A+ Y++ FPFG+D +
Sbjct: 415 SNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTV 474
Query: 1506 IWGSLLSSCRLHKNVVVGERVAKRLLELQPTVSSPYVLLSNLYASNGRWNDVAEARKMLK 1685
+ GSLLS+CRLH +V G+ A++LL+LQP +SPYVLLSNLYAS+ W+ VAEA K+LK
Sbjct: 475 VLGSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLK 534
Query: 1686 GSGVKKEPGHSMIEIEGGTVKFTVGDFSHKRIEEVKEILGTLNFQAEE 1829
GSG+KKEPGHS+IE+ G KFTV DFSH RIEE+ ++L L + A E
Sbjct: 535 GSGLKKEPGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKILRWAAIE 582
Score = 141 bits (355), Expect = 7e-31
Identities = 63/123 (51%), Positives = 91/123 (73%)
Frame = +1
Query: 244 MFLQQLGAVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHL 423
M + +G+++++C K K + GLPLHA IK SD+ + NH++N+YAKC L +A+ +
Sbjct: 1 MVPELVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQV 60
Query: 424 FDSMPNRNLISWSAIISGYVQAEKPLKAMEIFSQMPLQPNEYIYASVITACASLSALVQG 603
FD M RNL+SWSA+ISGY Q +P+ A+ +FS++ + PNEY+YASVI+ACASL LVQG
Sbjct: 61 FDEMSERNLVSWSAMISGYEQIGEPISALGLFSKLNIVPNEYVYASVISACASLKGLVQG 120
Query: 604 KQV 612
KQ+
Sbjct: 121 KQI 123
Score = 128 bits (321), Expect = 6e-27
Identities = 90/319 (28%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Frame = +3
Query: 606 TGFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLD 785
+G+ + +P LGLF +N + P+ + + +V+ C + + L G+ +H Q +K GLD
Sbjct: 77 SGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLD 133
Query: 786 TSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYREM 965
+ +FVSN L+T+Y KCG A+ E + +++N I K V R M
Sbjct: 134 SVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMM 193
Query: 966 ENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGA 1145
PD FT G+L C ++ G +H I+ K N + N +I MY+K
Sbjct: 194 YQD-GFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNL 252
Query: 1146 IELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQM-KTWGFSPDSITFIGVLT 1322
+E A + F SI ++L+S+NT I + + ALE FK+M PD TF L
Sbjct: 253 LEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALA 312
Query: 1323 ACSHAGLVDAGLIYFDSMKETYG------ISPQLEHLSCLVDMLGRAGRLEVAERYIEMF 1484
ACS GL + K+ +G + + + L++M + G + A YI
Sbjct: 313 ACS-------GLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKA-YYIFSK 364
Query: 1485 PFGNDLIIWGSLLSSCRLH 1541
+L+ W ++++ H
Sbjct: 365 MEHQNLVSWNTMIAGFGNH 383
Score = 125 bits (314), Expect = 4e-26
Identities = 78/273 (28%), Positives = 130/273 (47%), Gaps = 1/273 (0%)
Frame = +3
Query: 717 CCNKEDLEAGRSLHCQTIKLGLDTSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISW 896
C + L G LH IK + VSN ++ +Y+KC + F + E++++SW
Sbjct: 13 CSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSW 72
Query: 897 NTFIVACSHFGDHAKALMVYREMENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLI 1076
+ I G+ AL ++ ++ +I P+++ + V++ACA L + G QIH +
Sbjct: 73 SAMISGYEQIGEPISALGLFSKL----NIVPNEYVYASVISACASLKGLVQGKQIHGQAL 128
Query: 1077 RSKPNLDIGVCNALINMYAKCGAIELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALE 1256
+ + V NALI MY KCG AL ++ N V+YN +I G + + E
Sbjct: 129 KFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFE 188
Query: 1257 IFKQMKTWGFSPDSITFIGVLTAC-SHAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDM 1433
+ + M GF PD TF+G+L C S L L++ ++K + + +L ++ M
Sbjct: 189 VLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNL--IITM 246
Query: 1434 LGRAGRLEVAERYIEMFPFGNDLIIWGSLLSSC 1532
+ LE AE+ DLI W + +SSC
Sbjct: 247 YSKLNLLEEAEKAFRSIE-EKDLISWNTFISSC 278
Score = 82.0 bits (201), Expect = 5e-13
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 268 VLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNRN 447
+L C D K G LH IK+ S ++GN +I MY+K +L +A+ F S+ ++
Sbjct: 208 LLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKD 267
Query: 448 LISWSAIISGYVQAEKPLKAMEIFSQM----PLQPNEYIYASVITACASLSALVQGKQV 612
LISW+ IS KA+E F +M ++P+E+ +AS + AC+ L+++ GKQ+
Sbjct: 268 LISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQI 326
Score = 68.2 bits (165), Expect = 8e-09
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
Frame = +3
Query: 1002 LSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVCNALINMYAKCGAIELALRLFHSIP 1181
+ ++ C++ ++R G +H I++ D+ V N ++N+YAKC + A ++F +
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 1182 NRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTAC-SHAGLVDAGL 1358
RNLVS++ MI G G +AL +F ++ P+ + V++AC S GLV
Sbjct: 66 ERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQ 122
Query: 1359 IYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVA----ERYIEMFPFGNDLIIWG 1514
I+ ++K +G+ + L+ M + G+ A +E+ P + +I G
Sbjct: 123 IHGQALK--FGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITG 176
Score = 67.4 bits (163), Expect = 1e-08
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = +1
Query: 265 AVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNR 444
+ L C +G +H +I+ D+ GN LINMYAKCG ++ A ++F M ++
Sbjct: 309 SALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQ 368
Query: 445 NLISWSAIISGYVQAEKPLKAMEIFSQMP---LQPNEYIYASVITA 573
NL+SW+ +I+G+ KA E+F++M ++P+ + ++TA
Sbjct: 369 NLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTA 414
Score = 65.5 bits (158), Expect = 5e-08
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +1
Query: 265 AVLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSDAQHLFDSMPNR 444
+V+ C K G +H +K G +S ++ N LI MY KCG SDA ++
Sbjct: 106 SVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALEL 165
Query: 445 NLISWSAIISGYVQAEKPLKAMEIFSQM---PLQPNEYIYASVITACASLSALVQGKQVL 615
N ++++A+I+G+V+ ++P K E+ M P+ + + ++ C S L +G+ +
Sbjct: 166 NPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLH 225
Query: 616 QRTYNQK 636
+T K
Sbjct: 226 CQTIKLK 232
>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 315 bits (808), Expect = 2e-83
Identities = 164/411 (39%), Positives = 247/411 (60%), Gaps = 3/411 (0%)
Frame = +3
Query: 606 TGFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKL-GL 782
TG+ EN E+ L LFK M + ++PD + V+VL C +E GR +H G
Sbjct: 188 TGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGF 247
Query: 783 DTSAFVSNVLMTIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHFGDHAKALMVYRE 962
+S + N + +YSKCG + F + KDV+SWNT I +H + +AL++++E
Sbjct: 248 GSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQE 307
Query: 963 MENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLDIGVC--NALINMYAK 1136
M + + P+D T+ VL ACA L +I G IH ++ + + G +LI+MYAK
Sbjct: 308 MLRSGE-SPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAK 366
Query: 1137 CGAIELALRLFHSIPNRNLVSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGV 1316
CG IE A ++F+S+ +++L S+N MI G HGR A ++F +M+ G PD IT +G+
Sbjct: 367 CGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGL 426
Query: 1317 LTACSHAGLVDAGLIYFDSMKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMFPFGN 1496
L+ACSH+GL+D G F S+ + Y I+P+LEH C++D+LG AG + AE I M P
Sbjct: 427 LSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEP 486
Query: 1497 DLIIWGSLLSSCRLHKNVVVGERVAKRLLELQPTVSSPYVLLSNLYASNGRWNDVAEARK 1676
D +IW SLL +C++H N+ + E A++L+E++P S YVLLSN+YA+ GRW DVA R+
Sbjct: 487 DGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIRE 546
Query: 1677 MLKGSGVKKEPGHSMIEIEGGTVKFTVGDFSHKRIEEVKEILGTLNFQAEE 1829
+L G G+KK PG S IEI+ +F +GD H + E+ +L ++ EE
Sbjct: 547 VLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEE 597
Score = 144 bits (363), Expect = 8e-32
Identities = 100/347 (28%), Positives = 165/347 (47%), Gaps = 36/347 (10%)
Frame = +3
Query: 609 GFAENLQPEKGLGLFKLMNQQGLQPDRFSFVAVLGICCNKEDLEAGRSLHCQTIKLGLDT 788
G A + L ++ M G P+ ++F +L C + E GR +H Q +KLG +
Sbjct: 57 GLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCEL 116
Query: 789 SAFVSNVLMTIYSKCG----------------------------SIGSVESA---FWSIK 875
+ L+++Y++ G S G V SA F I
Sbjct: 117 DRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXIT 176
Query: 876 EKDVISWNTFIVACSHFGDHAKALMVYREMENACDIDPDDFTLSGVLTACAELASIRHGS 1055
E+DV+SWN I + +AL +++EM ++ PD+ TL VL+ACA+ SI G
Sbjct: 177 ERDVVSWNAMITGYVENCGYEEALELFKEMMRT-NVRPDEGTLVSVLSACAQSGSIELGR 235
Query: 1056 QIHTHLIRSKPNL--DIGVCNALINMYAKCGAIELALRLFHSIPNRNLVSYNTMIMGLGN 1229
+IHT L+ + + NA I +Y+KCG +E+A LF + +++VS+NT+I G +
Sbjct: 236 EIHT-LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTH 294
Query: 1230 HGRGQTALEIFKQMKTWGFSPDSITFIGVLTACSHAGLVDAGL---IYFDSMKETYGISP 1400
+ AL +F++M G SP+ +T + VL AC+H G +D G +Y D K G++
Sbjct: 295 MNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYID--KRLKGVTN 352
Query: 1401 QLEHLSCLVDMLGRAGRLEVAERYIEMFPFGNDLIIWGSLLSSCRLH 1541
+ L+DM + G +E A + L W +++ +H
Sbjct: 353 GSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMH 398
Score = 96.7 bits (239), Expect = 2e-17
Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 34/290 (11%)
Frame = +3
Query: 756 HCQTIKLGLDTSAFVSNVLM---TIYSKCGSIGSVESAFWSIKEKDVISWNTFIVACSHF 926
H Q +K GL + + + L+ + + S F + +E +++ WNT + +
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 927 GDHAKALMVYREMENACDIDPDDFTLSGVLTACAELASIRHGSQIHTHLIRSKPNLD--- 1097
D L +Y M + + P+ +T +L +CA+ + G QIH +++ LD
Sbjct: 62 SDLVSPLEMYVRMVSXGHV-PNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 1098 ----------------------------IGVCNALINMYAKCGAIELALRLFHSIPNRNL 1193
+ C ALI YA G + A ++F I R++
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 1194 VSYNTMIMGLGNHGRGQTALEIFKQMKTWGFSPDSITFIGVLTACSHAGLVDAGLIYFDS 1373
VS+N MI G + + ALE+FK+M PD T + VL+AC+ +G ++ G
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 1374 MKETYGISPQLEHLSCLVDMLGRAGRLEVAERYIEMFPFGNDLIIWGSLL 1523
+ + +G L+ ++ + + + G +E+A E D++ W +L+
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSC-KDVVSWNTLI 289
Score = 74.3 bits (181), Expect = 1e-10
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 34/149 (22%)
Frame = +1
Query: 268 VLYRCCKNKDFKHGLPLHAAVIKIGFESDLYLGNHLINMYAKCGVLSD------------ 411
+L C K+K F+ G +HA V+K+G E D Y LI+MYA+ G L D
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 412 -------------------AQHLFDSMPNRNLISWSAIISGYVQAEKPLKAMEIFSQM-- 528
A+ +FD + R+++SW+A+I+GYV+ +A+E+F +M
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208
Query: 529 -PLQPNEYIYASVITACASLSALVQGKQV 612
++P+E SV++ACA ++ G+++
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREI 237
Score = 65.5 bits (158), Expect = 5e-08
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +1
Query: 259 LGAVLYRCCKNKDFKHGLPLHAAVIKI-GFESDLYLGNHLINMYAKCGVLSDAQHLFDSM 435
L +VL C ++ + G +H V GF S L + N I +Y+KCG + A LF+ +
Sbjct: 218 LVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGL 277
Query: 436 PNRNLISWSAIISGYVQAEKPLKAMEIFSQM---PLQPNEYIYASVITACASLSALVQGK 606
++++SW+ +I GY +A+ +F +M PN+ SV+ ACA L A+ G+
Sbjct: 278 SCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 337
Query: 607 QVLQRTYNQKRVWDYSN 657
+ Y KR+ +N
Sbjct: 338 WI--HVYIDKRLKGVTN 352