BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014363
         (1453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   567   e-179
ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|2...   555   e-173
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   556   e-169
ref|XP_003541622.1| PREDICTED: RNA pseudourine synthase 6, chlor...   550   e-167
ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chlor...   546   e-166

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  567 bits (1462), Expect(2) = e-179
 Identities = 264/343 (76%), Positives = 308/343 (89%)
 Frame = +3

Query: 423  LIHFGAVHYALVCPKPPPSATPDQVRLFKEVTEPSVLQKRSSLKGKTVREAQKTYRISHV 602
            LIHFGAV+YALVCP+PPPSATP+QVRLFKEVT PSVL+KR S+KGKT+REAQKT+RI+ V
Sbjct: 124  LIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDV 183

Query: 603  NEFVEAGTYLRVHVHPKRFPRCYEVDWKSRIIAVAASYVVLDKPAATSVGGTTDNIEESC 782
            NEFVEAGTYLRVHVHPKRFPRCYE+DWKSRIIAV  SYVVLDKPA TSVGGTTDNIEESC
Sbjct: 184  NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 243

Query: 783  ATFTSRALGLETPLRTTHQIDNCTEGCVVLATTKEFCAIFHGMIREKQVKKLYLGLAAAP 962
            ATF +RALGL TPLRTTHQIDNCTEGCVVLA TKE+C++FHG IREK+VKKLY  LAAAP
Sbjct: 244  ATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAP 303

Query: 963  VPLGIISHYMRPVNIAPRLVSKDFIEGWHLCQLEVLECKEVPWPSSDVERRYNIEGCGWP 1142
            +P+GI++HYMRPVNIAPRL+S+DFI+GW+LCQLEVLECKEVPWPS+ +E +Y IE  GWP
Sbjct: 304  MPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWP 363

Query: 1143 SWSVAYECKINLLTGKTHQVRAQLAAIGAPLIGDTMYMPAVISEKANPLINPFGEYKKEY 1322
              + A++CKINLLTG+THQ+RAQLAA GAP++GD+MYMPA I+E  +P +NPFG+YKK+Y
Sbjct: 364  LKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKY 423

Query: 1323 TSHEDKMAAVEEWISQYGKEPSAAIGLQASQISWDNGKCSYKA 1451
            T+  D+  AV EWI+Q+GKEP  AIGLQA QISWD+G+  YKA
Sbjct: 424  TTENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKA 466



 Score = 89.0 bits (219), Expect(2) = e-179
 Identities = 54/120 (45%), Positives = 67/120 (55%)
 Frame = +2

Query: 14  APLASFFSNVLLSSLRASNPRGLMVPPGVLLRALXXXXXXXXXXXNKELWWVAKKKPLAP 193
           A L S F++ L+SSL  SN R    P  +   A            +K + W +       
Sbjct: 4   AILTSIFTSGLVSSLWNSNCRSFGTPVAL---ARTLASSNVFSRRHKRVVWCSNNPTCTR 60

Query: 194 VSAAKADAVLSSESSVYPRYPEYNRLLPCPQQNQPPRIEHLVVSEGGIVVDYISKALDLP 373
              A +D   S+ +S    YPEY+RLLPCP QN PPR+EHLVVSEGG V+DYISKALDLP
Sbjct: 61  ELTASSD---SANTSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLP 117


>ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|222847890|gb|EEE85437.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score =  555 bits (1430), Expect(2) = e-173
 Identities = 251/343 (73%), Positives = 304/343 (88%)
 Frame = +3

Query: 423  LIHFGAVHYALVCPKPPPSATPDQVRLFKEVTEPSVLQKRSSLKGKTVREAQKTYRISHV 602
            LIHFGAVHYALVCP+PP +ATP+Q+R+F+EVT PSVL+KR+S+KGKTVREAQKT+RI+HV
Sbjct: 118  LIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHV 177

Query: 603  NEFVEAGTYLRVHVHPKRFPRCYEVDWKSRIIAVAASYVVLDKPAATSVGGTTDNIEESC 782
            ++F+EAG YLRVHVHPKRFPRCY++DWKSRII V  S+VVLDKPA TSVGGTTDNIEESC
Sbjct: 178  DQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESC 237

Query: 783  ATFTSRALGLETPLRTTHQIDNCTEGCVVLATTKEFCAIFHGMIREKQVKKLYLGLAAAP 962
            ATF +RALGL  PLRTTHQIDNCTEGCVVLA T+E C++FHG IREK VKKLY+ LAA+P
Sbjct: 238  ATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASP 297

Query: 963  VPLGIISHYMRPVNIAPRLVSKDFIEGWHLCQLEVLECKEVPWPSSDVERRYNIEGCGWP 1142
            VP+G+++HYMRP+N+APRLVS++FI+GWHLCQLEV+ECK VPWP + +E +Y ++ CGWP
Sbjct: 298  VPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWP 357

Query: 1143 SWSVAYECKINLLTGKTHQVRAQLAAIGAPLIGDTMYMPAVISEKANPLINPFGEYKKEY 1322
            S   AYECKINLLTG+THQ+RAQLAA+GAPL+GD+MYMPA ++E  +P  NPFG+YKK+Y
Sbjct: 358  SKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQY 417

Query: 1323 TSHEDKMAAVEEWISQYGKEPSAAIGLQASQISWDNGKCSYKA 1451
            TS +DK  AVEEW+  +GKEP+ AIGLQA QISWD+GK  Y A
Sbjct: 418  TSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNA 460



 Score = 80.5 bits (197), Expect(2) = e-173
 Identities = 40/74 (54%), Positives = 46/74 (62%)
 Frame = +2

Query: 152 KELWWVAKKKPLAPVSAAKADAVLSSESSVYPRYPEYNRLLPCPQQNQPPRIEHLVVSEG 331
           K L W +  K      + K D   ++ +S    YPEY RLLPCP  N PPRIEHLVVSE 
Sbjct: 38  KALVWCSLSKKKLSCESLKQDIACTTATSSVNGYPEYTRLLPCPSHNSPPRIEHLVVSEE 97

Query: 332 GIVVDYISKALDLP 373
           G V+DYI KALDLP
Sbjct: 98  GPVLDYICKALDLP 111


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  556 bits (1432), Expect(2) = e-169
 Identities = 250/343 (72%), Positives = 305/343 (88%)
 Frame = +3

Query: 423  LIHFGAVHYALVCPKPPPSATPDQVRLFKEVTEPSVLQKRSSLKGKTVREAQKTYRISHV 602
            LI FGAVHYALVCP+PP +ATP+Q+RLF++ T PSVL+KRSS+KGKTVREAQKT+RI+HV
Sbjct: 124  LIDFGAVHYALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHV 183

Query: 603  NEFVEAGTYLRVHVHPKRFPRCYEVDWKSRIIAVAASYVVLDKPAATSVGGTTDNIEESC 782
            ++++EAGTYLRVHVHPKRFPRCY++DWKSRIIAV   YVVLDKPA TSVGGT DNIEESC
Sbjct: 184  DQYLEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESC 243

Query: 783  ATFTSRALGLETPLRTTHQIDNCTEGCVVLATTKEFCAIFHGMIREKQVKKLYLGLAAAP 962
            ATF +RALGL TPL+TTHQIDNCTEGCVVLA +KE+C++FHG IREK+VKKLYL LAA+P
Sbjct: 244  ATFATRALGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASP 303

Query: 963  VPLGIISHYMRPVNIAPRLVSKDFIEGWHLCQLEVLECKEVPWPSSDVERRYNIEGCGWP 1142
            VP+G+I +YMRPVNIAPRL+S++F+ GWHLCQLEVLEC++VPWP + +E +Y++E CGWP
Sbjct: 304  VPVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWP 363

Query: 1143 SWSVAYECKINLLTGKTHQVRAQLAAIGAPLIGDTMYMPAVISEKANPLINPFGEYKKEY 1322
            S   AYECKINLLTG+THQ+RAQLAA GAPL+GD+MYMPA ++E ANP +NPFG+++K+Y
Sbjct: 364  SKDFAYECKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQY 423

Query: 1323 TSHEDKMAAVEEWISQYGKEPSAAIGLQASQISWDNGKCSYKA 1451
            T+  D+  AV EW++Q+GKEP  AIGLQA +ISWD GK  YKA
Sbjct: 424  TNESDESMAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKA 466



 Score = 66.2 bits (160), Expect(2) = e-169
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = +2

Query: 200 AAKADAVLSSESSVYPRYPEYNRLLPCPQQNQPPRIEHLVVSEGGIVVDYISKALDLP 373
           ++K +   ++ +S      +Y+RLLPCP  N+PPRIEHLVV E G V+DYI KALDLP
Sbjct: 60  SSKPEVAYTTNTSCVNGNSDYDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLP 117


>ref|XP_003541622.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
            max]
          Length = 473

 Score =  550 bits (1416), Expect(2) = e-167
 Identities = 250/343 (72%), Positives = 306/343 (89%)
 Frame = +3

Query: 423  LIHFGAVHYALVCPKPPPSATPDQVRLFKEVTEPSVLQKRSSLKGKTVREAQKTYRISHV 602
            LI FGAV+YALVCP+PPP+AT +Q+R+FKEVTEPSVL+KR+S+KGKTVREAQKT+R++HV
Sbjct: 124  LIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHV 183

Query: 603  NEFVEAGTYLRVHVHPKRFPRCYEVDWKSRIIAVAASYVVLDKPAATSVGGTTDNIEESC 782
            ++FVE GTYLRVHVHPKRFPR YE+DW+SRIIAVA SYVVLDKPA TSVGGTTDNIEESC
Sbjct: 184  DQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESC 243

Query: 783  ATFTSRALGLETPLRTTHQIDNCTEGCVVLATTKEFCAIFHGMIREKQVKKLYLGLAAAP 962
            ATF +RALG+ TPL TTHQIDNCTEGCVVLA TK++C+IFHG IREK+VKKLYL LAA+P
Sbjct: 244  ATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASP 303

Query: 963  VPLGIISHYMRPVNIAPRLVSKDFIEGWHLCQLEVLECKEVPWPSSDVERRYNIEGCGWP 1142
            +P GII+HYMRP+N+APRL+S+DFI+GWHLCQLEVLEC+++PWP++ ++ +Y +E CGWP
Sbjct: 304  LPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWP 363

Query: 1143 SWSVAYECKINLLTGKTHQVRAQLAAIGAPLIGDTMYMPAVISEKANPLINPFGEYKKEY 1322
            S   AYECKINLLTGKTHQ+RAQ AA  APLIGD+MYMPA I++ +NP +NPFG+YKK++
Sbjct: 364  SQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDF 423

Query: 1323 TSHEDKMAAVEEWISQYGKEPSAAIGLQASQISWDNGKCSYKA 1451
            +S  +K  AV  W++Q+GKEPS AIGLQA QISWD+ +  Y+A
Sbjct: 424  SSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEA 466



 Score = 67.4 bits (163), Expect(2) = e-167
 Identities = 34/69 (49%), Positives = 44/69 (63%)
 Frame = +2

Query: 167 VAKKKPLAPVSAAKADAVLSSESSVYPRYPEYNRLLPCPQQNQPPRIEHLVVSEGGIVVD 346
           +A +   +   A    A  SS+S     +P+Y+RLLPCP    PPRIEHLV+SEGG V++
Sbjct: 54  LAGEAEFSTTDAGNLTATSSSDS-----FPKYDRLLPCPSHKNPPRIEHLVISEGGPVLE 108

Query: 347 YISKALDLP 373
            I KALDLP
Sbjct: 109 LICKALDLP 117


>ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
            max]
          Length = 473

 Score =  546 bits (1408), Expect(2) = e-166
 Identities = 250/343 (72%), Positives = 302/343 (88%)
 Frame = +3

Query: 423  LIHFGAVHYALVCPKPPPSATPDQVRLFKEVTEPSVLQKRSSLKGKTVREAQKTYRISHV 602
            LI FGAV+YALVCP+PPP+AT +Q+R+FKEVTEPSVL+KR+S+KGKTVREAQKT+R++HV
Sbjct: 124  LIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHV 183

Query: 603  NEFVEAGTYLRVHVHPKRFPRCYEVDWKSRIIAVAASYVVLDKPAATSVGGTTDNIEESC 782
            ++FVE GTYLRVHVHPKR PRCYE+DW+SRII VA SYVVLDKPA TSVGGTTDNIEESC
Sbjct: 184  DQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESC 243

Query: 783  ATFTSRALGLETPLRTTHQIDNCTEGCVVLATTKEFCAIFHGMIREKQVKKLYLGLAAAP 962
            ATF +RALG+ TPL TTHQIDNCTEGCVVLA TKE+C++FHG IREK+VKK YL LAA P
Sbjct: 244  ATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFP 303

Query: 963  VPLGIISHYMRPVNIAPRLVSKDFIEGWHLCQLEVLECKEVPWPSSDVERRYNIEGCGWP 1142
            +P GII+HYMRP+++APRL+S+DFI+GWHLCQLEVLEC++VPWP++ ++ +Y IE CGWP
Sbjct: 304  LPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWP 363

Query: 1143 SWSVAYECKINLLTGKTHQVRAQLAAIGAPLIGDTMYMPAVISEKANPLINPFGEYKKEY 1322
            S   AYECKINLLTGKTHQ+RAQ AA  APLIGD+MYMPA I+  +NP +NPFG+YKK++
Sbjct: 364  SQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDF 423

Query: 1323 TSHEDKMAAVEEWISQYGKEPSAAIGLQASQISWDNGKCSYKA 1451
            +S  +K  AV  WI+Q+GKEPS AIGLQA QISWD+ +  Y+A
Sbjct: 424  SSESEKETAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEA 466



 Score = 65.9 bits (159), Expect(2) = e-166
 Identities = 31/54 (57%), Positives = 40/54 (74%)
 Frame = +2

Query: 212 DAVLSSESSVYPRYPEYNRLLPCPQQNQPPRIEHLVVSEGGIVVDYISKALDLP 373
           DA + + +S    + +Y+RLLPCP    PPRIEHLVVSEGG V+++I KALDLP
Sbjct: 64  DAGILNATSSSDSFRKYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLP 117