BLASTX nr result

ID: Dioscorea21_contig00014307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014307
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin...   311   2e-82
emb|CAN70443.1| hypothetical protein VITISV_015572 [Vitis vinifera]   306   9e-81
ref|XP_002515393.1| zinc finger protein, putative [Ricinus commu...   301   2e-79
ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containin...   294   3e-77
ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|2...   293   4e-77

>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
            vinifera]
          Length = 496

 Score =  311 bits (797), Expect = 2e-82
 Identities = 175/339 (51%), Positives = 214/339 (63%), Gaps = 2/339 (0%)
 Frame = +2

Query: 2    GFDVPVSSLKQYIPTKWHQSLVGSNMWAVSESQSGIWRKAXXXXXXXXXGHGQVVFLDDG 181
            G DV +SSLKQY PT W QSLVGS++WAVS+++ GIW++A           G+VVF DDG
Sbjct: 167  GVDVHLSSLKQYNPTIWEQSLVGSSIWAVSDAKYGIWKEAELESWDNELRVGKVVFRDDG 226

Query: 182  TSAKLKTEALSISNYAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQGLGFLEATKLQR 361
            +S KL TE++S+S YAEM                             QGLGFLE+T LQR
Sbjct: 227  SSEKLGTESISLSEYAEMSDGETDSSSEQSDSCDDEEEEGS------QGLGFLESTALQR 280

Query: 362  GIQTETALFAQWENHTRGIASKMMASMGYREGMALGASGKGIVNPITVKILRPRQSLDHA 541
            GIQTETA+FA+WENHTRGIASKMMA+MGYREGM LGASG+GIV+P++VK+L P+QSLDHA
Sbjct: 281  GIQTETAIFAKWENHTRGIASKMMANMGYREGMGLGASGQGIVDPLSVKVLPPKQSLDHA 340

Query: 542  FASNESEEKKVDHNXXXXXXXXXXXXXXXXXXXXXXXXEEEMAPDVFSFINNQLT--GQD 715
              S+E+EE K                            +EE  PDVFS IN QL   G+ 
Sbjct: 341  LESHENEENKESRGKKRSRGGKRKRDKKFAAAARAKKDKEESRPDVFSLINTQLAMHGEA 400

Query: 716  VVNGSGNKQKKQSDGTSGSMKKVDRRSLVAYEDEVKELRNRVEKLEEMVNRNRKDKAMYE 895
            +  GS  KQ+ +S    G  KK DRR+LVAY+DEV+ELR RVEKLEEMVNRN+K+K +YE
Sbjct: 401  LNGGSAKKQQNKS---LGEGKKEDRRALVAYDDEVRELRIRVEKLEEMVNRNKKEKVVYE 457

Query: 896  AASRKLNETRKXXXXXXXXXXXXXXXXXXKEKEKKWLRF 1012
            AA RKLNETRK                  +EKEK+WL+F
Sbjct: 458  AAMRKLNETRKALAEAEAAHASASKAVVGREKEKRWLKF 496


>emb|CAN70443.1| hypothetical protein VITISV_015572 [Vitis vinifera]
          Length = 1119

 Score =  306 bits (783), Expect = 9e-81
 Identities = 173/337 (51%), Positives = 211/337 (62%), Gaps = 2/337 (0%)
 Frame = +2

Query: 2    GFDVPVSSLKQYIPTKWHQSLVGSNMWAVSESQSGIWRKAXXXXXXXXXGHGQVVFLDDG 181
            G DV +SSLKQY PT W QSLVGS++WAVS+++ GIW++A           G+VVF DDG
Sbjct: 7    GVDVHLSSLKQYNPTIWEQSLVGSSIWAVSDAKYGIWKEAELESWDNELRVGKVVFRDDG 66

Query: 182  TSAKLKTEALSISNYAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQGLGFLEATKLQR 361
            +S KL TE++S+S YAEM                             QGLGFLE+T LQR
Sbjct: 67   SSEKLGTESISLSEYAEMSDGETDSSSEQSDSCDDEEEEGS------QGLGFLESTALQR 120

Query: 362  GIQTETALFAQWENHTRGIASKMMASMGYREGMALGASGKGIVNPITVKILRPRQSLDHA 541
            GIQT TA+FA+WENHTRGIASKMMA+MGYREGM LGASG+GIV+P++VK+L P+QSLDHA
Sbjct: 121  GIQTXTAIFAKWENHTRGIASKMMANMGYREGMGLGASGQGIVDPLSVKVLPPKQSLDHA 180

Query: 542  FASNESEEKKVDHNXXXXXXXXXXXXXXXXXXXXXXXXEEEMAPDVFSFINNQLT--GQD 715
              S+E+EE K                            +EE  PDVFS IN QL   G+ 
Sbjct: 181  LESHENEENKESRGKKRSRGGKRKRDKKFAAAARAKKDKEESRPDVFSLINTQLAMHGEA 240

Query: 716  VVNGSGNKQKKQSDGTSGSMKKVDRRSLVAYEDEVKELRNRVEKLEEMVNRNRKDKAMYE 895
            +  GS  KQ+ +S    G  KK DRR+LVAY+DEV+ELR RVEKLEEMVNRN+K+K +YE
Sbjct: 241  LNGGSAKKQQNKS---LGEGKKEDRRALVAYDDEVRELRIRVEKLEEMVNRNKKEKVVYE 297

Query: 896  AASRKLNETRKXXXXXXXXXXXXXXXXXXKEKEKKWL 1006
            AA RKLNETRK                  +EKEK+WL
Sbjct: 298  AAMRKLNETRKALSEAEATHASASKAVVGREKEKRWL 334


>ref|XP_002515393.1| zinc finger protein, putative [Ricinus communis]
            gi|223545337|gb|EEF46842.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 495

 Score =  301 bits (772), Expect = 2e-79
 Identities = 165/337 (48%), Positives = 211/337 (62%)
 Frame = +2

Query: 2    GFDVPVSSLKQYIPTKWHQSLVGSNMWAVSESQSGIWRKAXXXXXXXXXGHGQVVFLDDG 181
            G DVP+SSL+ YIPT W QS+VGS++WAVS+S +GIWR+A           G+VVF DDG
Sbjct: 168  GVDVPLSSLRTYIPTMWDQSMVGSSIWAVSDSNAGIWREAELESWDDKLRVGKVVFRDDG 227

Query: 182  TSAKLKTEALSISNYAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQGLGFLEATKLQR 361
            +SA+L+++++++S +A                               QGLGFLE++ LQR
Sbjct: 228  SSAELESDSMNLSEHA------LKSDEEESHSSSEQSDSSDYEEESAQGLGFLESSTLQR 281

Query: 362  GIQTETALFAQWENHTRGIASKMMASMGYREGMALGASGKGIVNPITVKILRPRQSLDHA 541
            GIQTETA+FA+WENHTRGIASKMMA+MGYR+GM LGASG+G+V+PI+VK+L P+QSLDHA
Sbjct: 282  GIQTETAIFARWENHTRGIASKMMANMGYRDGMGLGASGQGMVDPISVKVLPPKQSLDHA 341

Query: 542  FASNESEEKKVDHNXXXXXXXXXXXXXXXXXXXXXXXXEEEMAPDVFSFINNQLTGQDVV 721
              S + EE + +H                         EEEM PDVFS IN QL   +  
Sbjct: 342  LQSQKEEEIRENHGKKRSRGGKRKREKKLAALAKEAKEEEEMNPDVFSLINIQLAKHNEA 401

Query: 722  NGSGNKQKKQSDGTSGSMKKVDRRSLVAYEDEVKELRNRVEKLEEMVNRNRKDKAMYEAA 901
               G+K K+  +  S   KKVDRR L+AY+DE+KELR R EKLEEM +RN+K+K +YEAA
Sbjct: 402  LNGGSKTKQHHNKVS---KKVDRRVLIAYDDEMKELRLRAEKLEEMASRNKKEKVVYEAA 458

Query: 902  SRKLNETRKXXXXXXXXXXXXXXXXXXKEKEKKWLRF 1012
             RKLNETRK                  KEKEKKWL+F
Sbjct: 459  MRKLNETRKALAEAEAAHASASNAVVSKEKEKKWLKF 495


>ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
            [Glycine max]
          Length = 495

 Score =  294 bits (752), Expect = 3e-77
 Identities = 166/338 (49%), Positives = 206/338 (60%), Gaps = 1/338 (0%)
 Frame = +2

Query: 2    GFDVPVSSLKQYIPTKWHQSLVGSNMWAVSESQSGIWRKAXXXXXXXXXGHGQVVFLDDG 181
            G DV +S+LK+Y+PT W QSLVGS++WAVS + +G WR+A         G GQVVF DDG
Sbjct: 165  GLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELKSWDEKAGVGQVVFRDDG 224

Query: 182  TSAKLKTEALSISNYAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQGLGFLEATKLQR 361
            +S KL  E +++S +AEM                             QG+GFLE+T LQR
Sbjct: 225  SSVKLGAEEMALSEHAEMSDIESDSSLDQSDSSDYEEEEES------QGIGFLESTNLQR 278

Query: 362  GIQTETALFAQWENHTRGIASKMMASMGYREGMALGASGKGIVNPITVKILRPRQSLDHA 541
            GIQTETA FA WENHTRGIASKMMA+MGYREGM LG +G+G+++PI VK+L P+QSLDHA
Sbjct: 279  GIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIAVKVLPPKQSLDHA 338

Query: 542  FASNESEE-KKVDHNXXXXXXXXXXXXXXXXXXXXXXXXEEEMAPDVFSFINNQLTGQDV 718
              S++ EE K+                            EEE A DVF+ INN L   + 
Sbjct: 339  LESHKREENKEKQGKKKQSRGGKRKREKKFAEANRAAKEEEESASDVFALINNHLAMHNE 398

Query: 719  VNGSGNKQKKQSDGTSGSMKKVDRRSLVAYEDEVKELRNRVEKLEEMVNRNRKDKAMYEA 898
              G G  +K+QS G S   KKVDRR+LVAYE+EVK+L+ RVEKLE +VN NRK+KA+YE 
Sbjct: 399  AFGGGLMKKQQSKG-SEEGKKVDRRALVAYEEEVKDLKIRVEKLEHIVNANRKEKAVYEG 457

Query: 899  ASRKLNETRKXXXXXXXXXXXXXXXXXXKEKEKKWLRF 1012
            A RKLNETRK                  KEKEK+WL+F
Sbjct: 458  AMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 495


>ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|222865778|gb|EEF02909.1|
            predicted protein [Populus trichocarpa]
          Length = 495

 Score =  293 bits (751), Expect = 4e-77
 Identities = 166/337 (49%), Positives = 207/337 (61%)
 Frame = +2

Query: 2    GFDVPVSSLKQYIPTKWHQSLVGSNMWAVSESQSGIWRKAXXXXXXXXXGHGQVVFLDDG 181
            G DV +SSLK Y+PT W QSLVGS++WA+S+S  GIWRKA           GQVVF D G
Sbjct: 168  GVDVSLSSLKNYVPTMWDQSLVGSSIWALSDSNVGIWRKAELESWDNEHRVGQVVFHDGG 227

Query: 182  TSAKLKTEALSISNYAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQGLGFLEATKLQR 361
            +SAKL +EA++IS YA M                             +GLGFLE+T LQR
Sbjct: 228  SSAKLGSEAMTISEYALMSDEEETDSSSEGSDSSDYDEESA------EGLGFLESTNLQR 281

Query: 362  GIQTETALFAQWENHTRGIASKMMASMGYREGMALGASGKGIVNPITVKILRPRQSLDHA 541
            GIQT TA+FA WENHTRGIASKMMA+MGYREGM LGASG+G+++PI VK+L P+QSLDHA
Sbjct: 282  GIQTGTAIFATWENHTRGIASKMMANMGYREGMGLGASGQGMLDPIPVKVLPPKQSLDHA 341

Query: 542  FASNESEEKKVDHNXXXXXXXXXXXXXXXXXXXXXXXXEEEMAPDVFSFINNQLTGQDVV 721
              S + E  K +H                         EEE  PDVF+ INNQL G +  
Sbjct: 342  LES-QKEGIKDNHGKKRSRGGKRKREKKFAAAARAAKAEEETRPDVFTLINNQLAGHNEA 400

Query: 722  NGSGNKQKKQSDGTSGSMKKVDRRSLVAYEDEVKELRNRVEKLEEMVNRNRKDKAMYEAA 901
              S + +K++S G+    KKV+R+ L+AY+DE+KELR RVEKLE+M NRN+K+K +YE+A
Sbjct: 401  LNSESAKKQKSKGS--EEKKVNRQDLLAYDDEIKELRIRVEKLEDMANRNKKEKVVYESA 458

Query: 902  SRKLNETRKXXXXXXXXXXXXXXXXXXKEKEKKWLRF 1012
             RKLNETR                   +EKEKKWL+F
Sbjct: 459  MRKLNETRIALAKAEASKASASNAITGREKEKKWLKF 495


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