BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014282
         (1845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   687   0.0  
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...   684   0.0  
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      679   0.0  
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]   678   0.0  
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      677   0.0  

>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  687 bits (1773), Expect = 0.0
 Identities = 354/535 (66%), Positives = 416/535 (77%), Gaps = 18/535 (3%)
 Frame = +3

Query: 3    EVEVIHDVENSAG---YVFSDGIGKISPEFARAVAKKCRIRTSTPSAYQIRYGGYKGVVA 173
            E+E I D+E   G   YVFSDGIGKISP+ A  VA KC  ++STPSA+QIRYGGYKGVVA
Sbjct: 508  EIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVA 567

Query: 174  VDPRSSMMKLYLRKSMSKYESGNNKLDVLAYSKYQPCYLNRQLITLLSTLGVPDAVFERK 353
            VDP SS  KL LRKSM KYES N  LDVLA+SKYQP +LNRQLITLLSTLGV D VFE+K
Sbjct: 568  VDPTSSR-KLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLGVKDHVFEKK 626

Query: 354  QREAVEQLDKMLVDPTNAQEAIEIMAPGETTSILKEMLLCGYKPGAGPFLPMLLEAFRAT 533
            QR AV+QLD +L DP  AQEA+E+M+PGE T++LKEML+CGYKP A PFL M+L+ FRA 
Sbjct: 627  QRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLSMMLQTFRAA 686

Query: 534  RLLELRTKSRIFIPKGRSLMGCLDETRILDYGEVFVQVSHTGDKHIYDDGLC-KFSGCQF 710
            +LLELRTK+RIF+P GRS+MGCLDETR L+YGEVFVQ+S TG +  + D L  + SG   
Sbjct: 687  KLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFRGSGSHH 746

Query: 711  DNCTVVEGRVIVAKNPCLHPGDIRVLQAVDVPNLHHMVDCVVFPQKGKRPHPNECSGSDL 890
            DN  ++EG+++VAKNPCLHPGD+RVL AV+VP LHHMVDCVVFPQKGKRPHPNECSGSDL
Sbjct: 747  DNF-ILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFPQKGKRPHPNECSGSDL 805

Query: 891  DGDIYFVSWDPSLIPPTQDEPMDYYPAKPVILDHDVTIEEVQDYFVNYMLNDSLGIISNA 1070
            DGDIYFV WD  LIPP Q  PMDY PA   +LDHDV IEEV++YF NY++NDSLGII+NA
Sbjct: 806  DGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANA 865

Query: 1071 HTVFADKKPLKARSEECLQLARLFSIAVDFPKTGVRAVIPPKLYVKEYPDFMEKPDKVTY 1250
            HTVFADK+  KA  + C +LA+LFSIAVDFPKTGV A IP  L VKEYPDFMEK DK TY
Sbjct: 866  HTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTY 925

Query: 1251 ISEGVIGKLFREIKHRTPNPSQIEAFTREAAAQSY--------------EASLFKDEYDI 1388
             S+ VIGKLFRE+K   P+   I +FTR+ A QSY              +A  +K EYD 
Sbjct: 926  ESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDY 985

Query: 1389 KLRNLMDQYDIKSKAQILSGSVMKATKSSNWFKDNEAIKLAVRHLRKEARGWFNE 1553
            KL NLMD Y IK++++ILSGS+M+ +KS +  KD EAI LAV+ LRKEAR WFN+
Sbjct: 986  KLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNK 1040


>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1133

 Score =  684 bits (1766), Expect = 0.0
 Identities = 350/535 (65%), Positives = 412/535 (77%), Gaps = 17/535 (3%)
 Frame = +3

Query: 3    EVEVIHDVENSAG---YVFSDGIGKISPEFARAVAKKCRIRTSTPSAYQIRYGGYKGVVA 173
            E+E+I D+E S G   Y+FSDGIGKIS EFAR VA KC  +  TPSA+QIRY GYKGVVA
Sbjct: 519  EIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVA 578

Query: 174  VDPRSSMMKLYLRKSMSKYESGNNKLDVLAYSKYQPCYLNRQLITLLSTLGVPDAVFERK 353
            VDP SS  KL LR+SM KYES N KLDVLA+SKYQPC+LNRQLITLLSTLGVPD  FERK
Sbjct: 579  VDPTSSK-KLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERK 637

Query: 354  QREAVEQLDKMLVDPTNAQEAIEIMAPGETTSILKEMLLCGYKPGAGPFLPMLLEAFRAT 533
            QREAV+QLD ML DP  AQEA+E+M+PGE T+ILKEMLLCGY+P A PFL M+L+ FRA+
Sbjct: 638  QREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRAS 697

Query: 534  RLLELRTKSRIFIPKGRSLMGCLDETRILDYGEVFVQVSHTGDKHIYDDGLCKFSGCQFD 713
            +LLELRTK+RIFIP GRS+MGCLDETR L++G+VFV+ S +  +++YD     FS     
Sbjct: 698  KLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDSS-DMFSERGRG 756

Query: 714  NCTVVEGRVIVAKNPCLHPGDIRVLQAVDVPNLHHMVDCVVFPQKGKRPHPNECSGSDLD 893
             C +++G V+VAKNPCLHPGD+R+L+AVDVP LHHMVDCVVFPQKG RPHPNECSGSDLD
Sbjct: 757  QCYLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLD 816

Query: 894  GDIYFVSWDPSLIPPTQDEPMDYYPAKPVILDHDVTIEEVQDYFVNYMLNDSLGIISNAH 1073
            GDIYFV WDP LIP  Q  PMDY P  P+ LDHDVTIEEV++YF NY++NDSLG+I+NAH
Sbjct: 817  GDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAH 876

Query: 1074 TVFADKKPLKARSEECLQLARLFSIAVDFPKTGVRAVIPPKLYVKEYPDFMEKPDKVTYI 1253
            T  ADK+ LKA SE C++LAR FSIAVDFPKTGV A IP  L  +EYPDFMEKPDK +Y 
Sbjct: 877  TAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYE 936

Query: 1254 SEGVIGKLFREIKHRTPNPSQIEAFTREAAAQSY--------------EASLFKDEYDIK 1391
            S  VIGKLFRE+K   P  S I +FT + A Q Y              +A  +K  YD K
Sbjct: 937  SRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYK 996

Query: 1392 LRNLMDQYDIKSKAQILSGSVMKATKSSNWFKDNEAIKLAVRHLRKEARGWFNEK 1556
            L NLM+ Y IK++A++LSGS MK +KS    +D EAI +AVR L+KEAR WFNEK
Sbjct: 997  LGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEK 1051


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  679 bits (1752), Expect = 0.0
 Identities = 344/535 (64%), Positives = 410/535 (76%), Gaps = 17/535 (3%)
 Frame = +3

Query: 3    EVEVIHDVE---NSAGYVFSDGIGKISPEFARAVAKKCRIRTSTPSAYQIRYGGYKGVVA 173
            E+ +I D+E   +   YVFSDGIGKIS EFA+ VA KCR++  TPSA+QIR GG+KGVVA
Sbjct: 512  EINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVA 571

Query: 174  VDPRSSMMKLYLRKSMSKYESGNNKLDVLAYSKYQPCYLNRQLITLLSTLGVPDAVFERK 353
            +DP SS  KL LRKSM KYES N KLDVLA+SKYQPC+LNRQLITLLSTLGVPD  FE+K
Sbjct: 572  IDPTSSW-KLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEKK 630

Query: 354  QREAVEQLDKMLVDPTNAQEAIEIMAPGETTSILKEMLLCGYKPGAGPFLPMLLEAFRAT 533
            QRE V+QL+ +L DP  AQEA+E+M+PGE T+ILKEMLLCGYKP A PFL M+LE FRA+
Sbjct: 631  QREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRAS 690

Query: 534  RLLELRTKSRIFIPKGRSLMGCLDETRILDYGEVFVQVSHTGDKHIYDDGLCKFSGCQFD 713
            +LLELRTK+RIF+ KGRS+MGCLDETR L+YG+VFVQ                FSG + +
Sbjct: 691  KLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQ----------------FSGSRSE 734

Query: 714  NCTVVEGRVIVAKNPCLHPGDIRVLQAVDVPNLHHMVDCVVFPQKGKRPHPNECSGSDLD 893
               +V+G+VIVAKNPCLHPGD+RVL+AV+VP+LHHMVDCVVFPQKG RPHPNECSGSDLD
Sbjct: 735  RRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDLD 794

Query: 894  GDIYFVSWDPSLIPPTQDEPMDYYPAKPVILDHDVTIEEVQDYFVNYMLNDSLGIISNAH 1073
            GD+YFV WDP LIP  Q +PMDY PA    LDH+VTIEE+++YF NY++NDSLGIISNAH
Sbjct: 795  GDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAH 854

Query: 1074 TVFADKKPLKARSEECLQLARLFSIAVDFPKTGVRAVIPPKLYVKEYPDFMEKPDKVTYI 1253
            T FAD++P KA S  CL+LA+LFSIAVDFPKTGV A IP +L VKEYPDFMEKPDK +Y 
Sbjct: 855  TAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSYQ 914

Query: 1254 SEGVIGKLFREIKHRTPNPSQIEAFTREAAAQSY--------------EASLFKDEYDIK 1391
            S  VIGKLFRE+K+  PN   I+  TRE   + Y              +A   K +YD K
Sbjct: 915  SHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYK 974

Query: 1392 LRNLMDQYDIKSKAQILSGSVMKATKSSNWFKDNEAIKLAVRHLRKEARGWFNEK 1556
            L NLMD Y +K++A+IL G +MK ++S    +D EAI +AVR LRKEAR WFNEK
Sbjct: 975  LGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEK 1029


>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
          Length = 697

 Score =  678 bits (1750), Expect = 0.0
 Identities = 348/535 (65%), Positives = 416/535 (77%), Gaps = 18/535 (3%)
 Frame = +3

Query: 3    EVEVIHDVE---NSAGYVFSDGIGKISPEFARAVAKKCRIRTSTPSAYQIRYGGYKGVVA 173
            E+E+I D+E   +   YVFSDGIGKIS E A  VA KC  ++STPSA+QIRYGGYKGVVA
Sbjct: 50   EIEIIPDIEIHRDGTTYVFSDGIGKISAELAHRVAIKCGCKSSTPSAFQIRYGGYKGVVA 109

Query: 174  VDPRSSMMKLYLRKSMSKYESGNNKLDVLAYSKYQPCYLNRQLITLLSTLGVPDAVFERK 353
            VDP SS  KL LRKSM KYES N  LDVL++SKY+PC+LNRQLITLLSTLGV D VFE+K
Sbjct: 110  VDPTSSR-KLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKK 168

Query: 354  QREAVEQLDKMLVDPTNAQEAIEIMAPGETTSILKEMLLCGYKPGAGPFLPMLLEAFRAT 533
            QREAV+QLD +L DP  AQEA+E+M+PGE T+ILKEML+CGYKP A PFL M+L+ FRA 
Sbjct: 169  QREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLSMMLQTFRAA 228

Query: 534  RLLELRTKSRIFIPKGRSLMGCLDETRILDYGEVFVQVSHTGDKHIYDDGLCKF-SGCQF 710
            +LLELRTK+RIF+P GRS+MGCLDETR L+YGEVFVQ+S TG +  + D L  + SG   
Sbjct: 229  KLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFYGSGSHH 288

Query: 711  DNCTVVEGRVIVAKNPCLHPGDIRVLQAVDVPNLHHMVDCVVFPQKGKRPHPNECSGSDL 890
            DN  ++EG+V+VAKNPCLHPGD+R+L AVDVP LHHMVDCVVFPQKG RPHP+ECSGSDL
Sbjct: 289  DNF-ILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDL 347

Query: 891  DGDIYFVSWDPSLIPPTQDEPMDYYPAKPVILDHDVTIEEVQDYFVNYMLNDSLGIISNA 1070
            DGDIYFV WD  LIPP Q  PMDY PA   +LDHDV IEEV++YF NY+ ND LGII+NA
Sbjct: 348  DGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIGNDKLGIIANA 407

Query: 1071 HTVFADKKPLKARSEECLQLARLFSIAVDFPKTGVRAVIPPKLYVKEYPDFMEKPDKVTY 1250
            HTVFADK+  KA    C +LA+LFSIA++FPKTGV A IP  L+VKEYPDFMEK +K TY
Sbjct: 408  HTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPAEIPFHLHVKEYPDFMEKANKPTY 467

Query: 1251 ISEGVIGKLFREIKHRTPNPSQIEAFTREAAAQSYEASL--------------FKDEYDI 1388
             S+ VIGKLFRE+K   P+   I +FTR+ A QSY+A +              +K +YD 
Sbjct: 468  ESQSVIGKLFREVKDVAPHNYDIRSFTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYDF 527

Query: 1389 KLRNLMDQYDIKSKAQILSGSVMKATKSSNWFKDNEAIKLAVRHLRKEARGWFNE 1553
            KL +LMD Y I+++++ILSGS+MK +KS +  KD EAI LAVR LRKEAR WFN+
Sbjct: 528  KLGSLMDCYGIRTESEILSGSLMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNK 582


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  677 bits (1746), Expect = 0.0
 Identities = 342/535 (63%), Positives = 411/535 (76%), Gaps = 17/535 (3%)
 Frame = +3

Query: 3    EVEVIHDVE---NSAGYVFSDGIGKISPEFARAVAKKCRIRTSTPSAYQIRYGGYKGVVA 173
            E+ +I D+E   +   YVF DGIGKIS EFA+ VA KCR++  TPSA+QIR GG+KGVVA
Sbjct: 512  EINLIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVA 571

Query: 174  VDPRSSMMKLYLRKSMSKYESGNNKLDVLAYSKYQPCYLNRQLITLLSTLGVPDAVFERK 353
            +DP SS  KL LRKSM KYES N KLDVLA+SKYQPC+LNRQLITLLSTLGVPD  FE+K
Sbjct: 572  IDPTSSW-KLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEKK 630

Query: 354  QREAVEQLDKMLVDPTNAQEAIEIMAPGETTSILKEMLLCGYKPGAGPFLPMLLEAFRAT 533
            QRE V+QL+ +L DP  AQEA+E+M+PGE T+ILKEMLLCGYKP A PFL M+LE FRA+
Sbjct: 631  QREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRAS 690

Query: 534  RLLELRTKSRIFIPKGRSLMGCLDETRILDYGEVFVQVSHTGDKHIYDDGLCKFSGCQFD 713
            +LLELRTK+RIF+ KGRS+MGCLDETR L+YG+VFVQ                FSG + +
Sbjct: 691  KLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQ----------------FSGSRSE 734

Query: 714  NCTVVEGRVIVAKNPCLHPGDIRVLQAVDVPNLHHMVDCVVFPQKGKRPHPNECSGSDLD 893
               +V+G+VIVAKNPCLHPGD+RVL+AV+VP+LHHMVDCVVFPQKG RPHPNECSGSDLD
Sbjct: 735  RRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDLD 794

Query: 894  GDIYFVSWDPSLIPPTQDEPMDYYPAKPVILDHDVTIEEVQDYFVNYMLNDSLGIISNAH 1073
            GD+YFV WDP LIP  Q +PMDY PA    LDH+VTIEE+++YF NY++NDSLGIISNAH
Sbjct: 795  GDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAH 854

Query: 1074 TVFADKKPLKARSEECLQLARLFSIAVDFPKTGVRAVIPPKLYVKEYPDFMEKPDKVTYI 1253
            T FAD++P KA S  CL+LA+LFSIAVDFPKTGV A IP +L VKE+PDFMEKPDK +Y 
Sbjct: 855  TAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEFPDFMEKPDKPSYQ 914

Query: 1254 SEGVIGKLFREIKHRTPNPSQIEAFTREAAAQSY--------------EASLFKDEYDIK 1391
            S  VIGKLFRE+K+  PN   I+  TRE   + Y              +A  +K +YD K
Sbjct: 915  SYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDPDMEVEGFVDYIDDAFFYKSKYDYK 974

Query: 1392 LRNLMDQYDIKSKAQILSGSVMKATKSSNWFKDNEAIKLAVRHLRKEARGWFNEK 1556
            L NLMD Y +K++A+ILSG +MK ++S    +D E+I +AVR LRKEAR WFNEK
Sbjct: 975  LGNLMDYYGVKTEAEILSGGIMKMSRSFTKKRDAESISMAVRSLRKEARSWFNEK 1029