BLASTX nr result

ID: Dioscorea21_contig00014243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014243
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g...   225   6e-57
emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]   225   6e-57
emb|CBI19333.3| unnamed protein product [Vitis vinifera]              199   5e-49
ref|XP_002302373.1| predicted protein [Populus trichocarpa] gi|2...   183   3e-44
ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g...   181   1e-43

>ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 701

 Score =  225 bits (574), Expect = 6e-57
 Identities = 122/229 (53%), Positives = 147/229 (64%), Gaps = 1/229 (0%)
 Frame = +2

Query: 26  MAFQVTPSKRPYERHPLESNGRGKWQKTAPSITQQNQSKASPGAVVFRLLCPXXXXXXXX 205
           M+F +TPSKR YER   +SNG+GKWQK+    +Q    K SPG VVFR+LCP        
Sbjct: 1   MSFSLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVI 60

Query: 206 XXXXXXXAKIRQDTGAKIRIEETIPGCDERVVVITSSESDMEARNEHDQEDEGEKSPPDD 385
                  ++IRQ+TG K+R+EET+ GCDERVV+IT S+ D EA NE  +ED  +    ++
Sbjct: 61  GKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEE 120

Query: 386 DKDTKNADENDNEKGDDPAADGSKSEKGSSSAQMALLLVCERITEEEPE-NDGAEEVGKX 562
             DTK   END +K   P  D S+ EKG SS Q ALLLV ER+ E E E N G E+  K 
Sbjct: 121 VSDTKEPGENDEDKESVPVED-SQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKS 179

Query: 563 XXXXXXXXXXXXQVGCILGKGGSVIKQMSADSGAQIRILPRDKLPLCAS 709
                       QVGC+LGKGGSVIKQMSA+SGAQIRILPRDKLPLCAS
Sbjct: 180 PTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCAS 228


>emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
          Length = 709

 Score =  225 bits (574), Expect = 6e-57
 Identities = 122/229 (53%), Positives = 147/229 (64%), Gaps = 1/229 (0%)
 Frame = +2

Query: 26  MAFQVTPSKRPYERHPLESNGRGKWQKTAPSITQQNQSKASPGAVVFRLLCPXXXXXXXX 205
           M+F +TPSKR YER   +SNG+GKWQK+    +Q    K SPG VVFR+LCP        
Sbjct: 1   MSFSLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVI 60

Query: 206 XXXXXXXAKIRQDTGAKIRIEETIPGCDERVVVITSSESDMEARNEHDQEDEGEKSPPDD 385
                  ++IRQ+TG K+R+EET+ GCDERVV+IT S+ D EA NE  +ED  +    ++
Sbjct: 61  GKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEE 120

Query: 386 DKDTKNADENDNEKGDDPAADGSKSEKGSSSAQMALLLVCERITEEEPE-NDGAEEVGKX 562
             DTK   END +K   P  D S+ EKG SS Q ALLLV ER+ E E E N G E+  K 
Sbjct: 121 VSDTKEPGENDEDKESVPVED-SQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKS 179

Query: 563 XXXXXXXXXXXXQVGCILGKGGSVIKQMSADSGAQIRILPRDKLPLCAS 709
                       QVGC+LGKGGSVIKQMSA+SGAQIRILPRDKLPLCAS
Sbjct: 180 PTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCAS 228


>emb|CBI19333.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  199 bits (506), Expect = 5e-49
 Identities = 113/229 (49%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
 Frame = +2

Query: 26  MAFQVTPSKRPYERHPLESNGRGKWQKTAPSITQQNQSKASPGAVVFRLLCPXXXXXXXX 205
           M+F +TPSKR YER   +SNG+GKWQK+    +Q    K SPG VVFR+LCP        
Sbjct: 1   MSFSLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVI 60

Query: 206 XXXXXXXAKIRQDTGAKIRIEETIPGCDERVVVITSSESDMEARNEHDQEDEGEKSPPDD 385
                  ++IRQ+TG K+R+EET+ GCDERVV+IT S+ D EA NE  +ED+        
Sbjct: 61  GKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDD-------- 112

Query: 386 DKDTKNADENDNEKGDDPAADGSKSEKGSSSAQMALLLVCERITEEEPE-NDGAEEVGKX 562
                                 S+ EKG SS Q ALLLV ER+ E E E N G E+  K 
Sbjct: 113 ----------------------SQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKS 150

Query: 563 XXXXXXXXXXXXQVGCILGKGGSVIKQMSADSGAQIRILPRDKLPLCAS 709
                       QVGC+LGKGGSVIKQMSA+SGAQIRILPRDKLPLCAS
Sbjct: 151 PTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCAS 199


>ref|XP_002302373.1| predicted protein [Populus trichocarpa] gi|222844099|gb|EEE81646.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  183 bits (465), Expect = 3e-44
 Identities = 104/230 (45%), Positives = 141/230 (61%), Gaps = 2/230 (0%)
 Frame = +2

Query: 26  MAFQVTPSKRPYERHPLESNGRGKWQKTAPSITQQNQSKASPGAVVFRLLCPXXXXXXXX 205
           M+  +TPSKR ++    E+NG+GK Q TA + +     K+SP AVVFR+LCP        
Sbjct: 1   MSTALTPSKRLHDSKSTETNGKGKRQNTAGTNSPNQPLKSSPAAVVFRILCPAPKIGTVT 60

Query: 206 XXXXXXXAKIRQDTGAKIRIEETIPGCDERVVVITSSESDMEARNEHDQEDEGEKSPPDD 385
                  ++IRQ+TGAK+ +EE IPGCDE+++VIT S+   E   E  ++D  E++   +
Sbjct: 61  GEGGAVISQIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVSIEQSKKDGDEEANVAE 120

Query: 386 DKDTKN-ADENDNEKGDDPAADGSKSEKGSSSAQMALLLVCERITEEEPENDGA-EEVGK 559
           + D KN  +E + EK   P  D S + K +SS Q ALLLV  ++ E +P  DG  EE  K
Sbjct: 121 ESDNKNDGNEKEEEKEGVPVED-SGTVKETSSMQKALLLVSGKMFEADPVTDGGDEENNK 179

Query: 560 XXXXXXXXXXXXXQVGCILGKGGSVIKQMSADSGAQIRILPRDKLPLCAS 709
                        QVGC+LGKGGSVIKQMSA+SGAQIRI PRD+LP+C+S
Sbjct: 180 PSTFILRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDRLPICSS 229


>ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus] gi|449522219|ref|XP_004168125.1| PREDICTED: KH
           domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 693

 Score =  181 bits (459), Expect = 1e-43
 Identities = 99/226 (43%), Positives = 136/226 (60%), Gaps = 2/226 (0%)
 Frame = +2

Query: 26  MAFQVTPSKRPYERHPLESNGRGKWQKTAPSITQQNQS-KASPGAVVFRLLCPXXXXXXX 202
           M+  +TPSKR  +R  ++SNG+GKWQK++ S +++NQS K SPG  VFR+L P       
Sbjct: 1   MSAPLTPSKRSRDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDSL 60

Query: 203 XXXXXXXXAKIRQDTGAKIRIEETIPGCDERVVVITSSESDMEARNEHDQEDEGEKSPPD 382
                   +KIR++TG +IR+E+TIPGCDER+ VI  S  + E   E   +++ + S  +
Sbjct: 61  VGRDGDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVE 120

Query: 383 DDKDTKNADENDNEKGDDPAADGSKSEKGSSSAQMALLLVCERITEEEPENDGAEEVG-K 559
           ++       +   +K   P  D  + E   S  + AL LV E+I +EEPE DG +  G K
Sbjct: 121 ENDGDIAKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDK 180

Query: 560 XXXXXXXXXXXXXQVGCILGKGGSVIKQMSADSGAQIRILPRDKLP 697
                        QVGC+LGKGGSV+KQMS+DSGAQIRILPRDKLP
Sbjct: 181 LPTFILRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLP 226


Top